Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d16f
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53793-1|CAA37801.1| 425|Homo sapiens ADE2H1 protein. 235 7e-62
BT006988-1|AAP35634.1| 425|Homo sapiens phosphoribosylaminoimid... 235 7e-62
BC019255-1|AAH19255.1| 425|Homo sapiens phosphoribosylaminoimid... 235 7e-62
BC010273-1|AAH10273.1| 425|Homo sapiens phosphoribosylaminoimid... 235 7e-62
BC050477-1|AAH50477.1| 904|Homo sapiens zinc finger protein 598... 30 5.4
BC041015-1|AAH41015.1| 523|Homo sapiens ZNF598 protein protein. 30 5.4
AY393313-1|AAR32368.1| 127|Homo sapiens immunoglobulin heavy ch... 29 9.5
>X53793-1|CAA37801.1| 425|Homo sapiens ADE2H1 protein.
Length = 425
Score = 235 bits (576), Expect = 7e-62
Identities = 118/203 (58%), Positives = 145/203 (71%), Gaps = 3/203 (1%)
Frame = +2
Query: 2 GVD-TEGSIVLADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADLDTVKRNFAWVKD 178
GVD T IVLADVID+DSWRLWPSGD+ DKQ YR+L VT L VK+NF WV +
Sbjct: 195 GVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAE 254
Query: 179 QLDFL-KPTIHHKVVVFMGSPADQEHCQKIAKAARELGLDVDLRVTSAHKATEETLRIMQ 355
+++ L K +VVV MGS +D HC+KI KA G+ +LRVTSAHK +ETLRI
Sbjct: 255 RVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKA 314
Query: 356 QYEDTHGALVFIAVAGRSNGLGPVLSGNTSYPVINCPP-PSDKLVQDIWSSLSVPSGLGC 532
+YE VF+AVAGRSNGLGPV+SGNT+YPVI+CPP D VQD+WSSL +PSGLGC
Sbjct: 315 EYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGC 374
Query: 533 ATVIYPDSAALMAAQIIGLQDYL 601
+TV+ P+ +A AAQI GL ++L
Sbjct: 375 STVLSPEGSAQFAAQIFGLSNHL 397
>BT006988-1|AAP35634.1| 425|Homo sapiens
phosphoribosylaminoimidazole carboxylase,
phosphoribosylaminoimidazole succinoc protein.
Length = 425
Score = 235 bits (576), Expect = 7e-62
Identities = 118/203 (58%), Positives = 145/203 (71%), Gaps = 3/203 (1%)
Frame = +2
Query: 2 GVD-TEGSIVLADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADLDTVKRNFAWVKD 178
GVD T IVLADVID+DSWRLWPSGD+ DKQ YR+L VT L VK+NF WV +
Sbjct: 195 GVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAE 254
Query: 179 QLDFL-KPTIHHKVVVFMGSPADQEHCQKIAKAARELGLDVDLRVTSAHKATEETLRIMQ 355
+++ L K +VVV MGS +D HC+KI KA G+ +LRVTSAHK +ETLRI
Sbjct: 255 RVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKA 314
Query: 356 QYEDTHGALVFIAVAGRSNGLGPVLSGNTSYPVINCPP-PSDKLVQDIWSSLSVPSGLGC 532
+YE VF+AVAGRSNGLGPV+SGNT+YPVI+CPP D VQD+WSSL +PSGLGC
Sbjct: 315 EYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGC 374
Query: 533 ATVIYPDSAALMAAQIIGLQDYL 601
+TV+ P+ +A AAQI GL ++L
Sbjct: 375 STVLSPEGSAQFAAQIFGLSNHL 397
>BC019255-1|AAH19255.1| 425|Homo sapiens
phosphoribosylaminoimidazole carboxylase,
phosphoribosylaminoimidazole succinoc protein.
Length = 425
Score = 235 bits (576), Expect = 7e-62
Identities = 118/203 (58%), Positives = 145/203 (71%), Gaps = 3/203 (1%)
Frame = +2
Query: 2 GVD-TEGSIVLADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADLDTVKRNFAWVKD 178
GVD T IVLADVID+DSWRLWPSGD+ DKQ YR+L VT L VK+NF WV +
Sbjct: 195 GVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAE 254
Query: 179 QLDFL-KPTIHHKVVVFMGSPADQEHCQKIAKAARELGLDVDLRVTSAHKATEETLRIMQ 355
+++ L K +VVV MGS +D HC+KI KA G+ +LRVTSAHK +ETLRI
Sbjct: 255 RVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKA 314
Query: 356 QYEDTHGALVFIAVAGRSNGLGPVLSGNTSYPVINCPP-PSDKLVQDIWSSLSVPSGLGC 532
+YE VF+AVAGRSNGLGPV+SGNT+YPVI+CPP D VQD+WSSL +PSGLGC
Sbjct: 315 EYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGC 374
Query: 533 ATVIYPDSAALMAAQIIGLQDYL 601
+TV+ P+ +A AAQI GL ++L
Sbjct: 375 STVLSPEGSAQFAAQIFGLSNHL 397
>BC010273-1|AAH10273.1| 425|Homo sapiens
phosphoribosylaminoimidazole carboxylase,
phosphoribosylaminoimidazole succinoc protein.
Length = 425
Score = 235 bits (576), Expect = 7e-62
Identities = 118/203 (58%), Positives = 145/203 (71%), Gaps = 3/203 (1%)
Frame = +2
Query: 2 GVD-TEGSIVLADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADLDTVKRNFAWVKD 178
GVD T IVLADVID+DSWRLWPSGD+ DKQ YR+L VT L VK+NF WV +
Sbjct: 195 GVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAE 254
Query: 179 QLDFL-KPTIHHKVVVFMGSPADQEHCQKIAKAARELGLDVDLRVTSAHKATEETLRIMQ 355
+++ L K +VVV MGS +D HC+KI KA G+ +LRVTSAHK +ETLRI
Sbjct: 255 RVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKA 314
Query: 356 QYEDTHGALVFIAVAGRSNGLGPVLSGNTSYPVINCPP-PSDKLVQDIWSSLSVPSGLGC 532
+YE VF+AVAGRSNGLGPV+SGNT+YPVI+CPP D VQD+WSSL +PSGLGC
Sbjct: 315 EYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGC 374
Query: 533 ATVIYPDSAALMAAQIIGLQDYL 601
+TV+ P+ +A AAQI GL ++L
Sbjct: 375 STVLSPEGSAQFAAQIFGLSNHL 397
>BC050477-1|AAH50477.1| 904|Homo sapiens zinc finger protein 598
protein.
Length = 904
Score = 30.3 bits (65), Expect = 5.4
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 419 GPVLSGNTSYPVINCPPPSDKLVQDIWSSLSVPSGLGCATVIYPDSAAL 565
GP G P PPPS KL + + SLS + C+T P L
Sbjct: 420 GPAAPGCVGVPGA-LPPPSPKLKDEDFPSLSASTSSSCSTAATPGPVGL 467
>BC041015-1|AAH41015.1| 523|Homo sapiens ZNF598 protein protein.
Length = 523
Score = 30.3 bits (65), Expect = 5.4
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 419 GPVLSGNTSYPVINCPPPSDKLVQDIWSSLSVPSGLGCATVIYPDSAAL 565
GP G P PPPS KL + + SLS + C+T P L
Sbjct: 39 GPAAPGCVGVPGA-LPPPSPKLKDEDFPSLSASTSSSCSTAATPGPVGL 86
>AY393313-1|AAR32368.1| 127|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 127
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 29 LADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADLDTV 151
LA + D+ R P RL ++K Y+N +T +D+D V
Sbjct: 38 LAVIYWDDAKRYRPGLRSRLTINKDTYKNQVVLTVSDMDPV 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,003,541
Number of Sequences: 237096
Number of extensions: 2405528
Number of successful extensions: 4915
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4907
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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