Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d16f
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical pr... 210 8e-55
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.63
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 29 3.4
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 29 3.4
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 4.5
Z68159-10|CAD30432.1| 826|Caenorhabditis elegans Hypothetical p... 28 5.9
Z68159-9|CAA92282.2| 844|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF339059-1|AAL50361.1| 826|Caenorhabditis elegans Rho guanine n... 28 5.9
AF326352-1|AAL50355.1| 844|Caenorhabditis elegans putative Rho ... 28 5.9
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 28 5.9
AF016438-13|AAK84531.2| 402|Caenorhabditis elegans Nuclear horm... 28 5.9
AB060647-1|BAB43906.1| 826|Caenorhabditis elegans putative GDP-... 28 5.9
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 27 7.8
U88169-10|AAB42232.2| 231|Caenorhabditis elegans Coenzyme q (ub... 27 7.8
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 27 7.8
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 27 7.8
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 27 7.8
AF016436-2|AAC25898.1| 406|Caenorhabditis elegans Hypothetical ... 27 7.8
>U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical
protein B0286.3 protein.
Length = 423
Score = 210 bits (512), Expect = 8e-55
Identities = 101/201 (50%), Positives = 138/201 (68%), Gaps = 1/201 (0%)
Frame = +2
Query: 2 GVDTEGSIVLADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADLDTVKRNFAWVKD- 178
GV EG I+LADVID+DSWR+WP D+RL +DKQVYR++ VT L V +N+ V D
Sbjct: 199 GVTVEGEILLADVIDNDSWRVWPENDRRLQLDKQVYRDMKEVTEEGLALVLKNYTKVMDI 258
Query: 179 QLDFLKPTIHHKVVVFMGSPADQEHCQKIAKAARELGLDVDLRVTSAHKATEETLRIMQQ 358
F K V+V MGS +D +KI+ A++ GL+ L+V+SAHK T +TL ++
Sbjct: 259 TATFSKHQQKCHVLVIMGSGSDGVFARKISDEAKKFGLETTLKVSSAHKTTSDTLEVIAD 318
Query: 359 YEDTHGALVFIAVAGRSNGLGPVLSGNTSYPVINCPPPSDKLVQDIWSSLSVPSGLGCAT 538
+E++ V IAVAGRSNGLGPV++GN+S PVINCPPPS+ DIWSSL +P+G+GC T
Sbjct: 319 FEESGVPTVVIAVAGRSNGLGPVIAGNSSLPVINCPPPSESTSLDIWSSLRMPNGIGCTT 378
Query: 539 VIYPDSAALMAAQIIGLQDYL 601
V+ P AAL AA+I+ +++
Sbjct: 379 VLDPSEAALAAAKILASHNHI 399
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1
Query: 224 RRQLCGGSSASRNQAGLSPKQSCV*LCLDQLQSPL*GSGTPVCQ 93
RRQ CG SS+S + S C+ +C+ Q QS TP+CQ
Sbjct: 31 RRQCCGRSSSSCCSSS-SSNSYCIPVCMAQCQS---SCTTPICQ 70
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 167 WVKDQLDFLKPTIHHKVVVFMGSPADQEHC----QKIAKAARELGLDVDLRVTSAHKATE 334
W++D +KPTI V+ M A + C ++ + R + L+V+ + +
Sbjct: 860 WLRDGSKVVKPTIPQNKVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGSLVD 919
Query: 335 ETLRIMQQYEDTHGALV 385
+ R+M+QY + LV
Sbjct: 920 QMTRMMEQYANNLEKLV 936
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 167 WVKDQLDFLKPTIHHKVVVFMGSPADQEHC----QKIAKAARELGLDVDLRVTSAHKATE 334
W++D +KPTI V+ M A + C ++ + R + L+V+ + +
Sbjct: 806 WLRDGSKVVKPTIPQNKVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGSLVD 865
Query: 335 ETLRIMQQYEDTHGALV 385
+ R+M+QY + LV
Sbjct: 866 QMTRMMEQYANNLEKLV 882
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 35 DVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADL 142
++ D W LWP D R +V ++ L+ + A DL
Sbjct: 1861 EIYIEDGWNLWPD-DVRTVVGSKMSSELSRIVARDL 1895
>Z68159-10|CAD30432.1| 826|Caenorhabditis elegans Hypothetical
protein C33D9.1b protein.
Length = 826
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 472 RRWAVDDRVGSVPRKNGPESVRSSCYSNEHESTMRIFILLHNAKGF 335
R W R+ +V RK P S Y+N ++ ++F L K F
Sbjct: 365 RDWHTTKRIANVVRKQAPFLKMYSEYTNNYDRATKLFEELKKKKKF 410
>Z68159-9|CAA92282.2| 844|Caenorhabditis elegans Hypothetical
protein C33D9.1a protein.
Length = 844
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 472 RRWAVDDRVGSVPRKNGPESVRSSCYSNEHESTMRIFILLHNAKGF 335
R W R+ +V RK P S Y+N ++ ++F L K F
Sbjct: 365 RDWHTTKRIANVVRKQAPFLKMYSEYTNNYDRATKLFEELKKKKKF 410
>AF339059-1|AAL50361.1| 826|Caenorhabditis elegans Rho guanine
nucleotide exchangefactor FGD-1 protein.
Length = 826
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 472 RRWAVDDRVGSVPRKNGPESVRSSCYSNEHESTMRIFILLHNAKGF 335
R W R+ +V RK P S Y+N ++ ++F L K F
Sbjct: 365 RDWHTTKRIANVVRKQAPFLKMYSEYTNNYDRATKLFEELKKKKKF 410
>AF326352-1|AAL50355.1| 844|Caenorhabditis elegans putative Rho
guanine nucleotideexchange factor FGD-1 protein.
Length = 844
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 472 RRWAVDDRVGSVPRKNGPESVRSSCYSNEHESTMRIFILLHNAKGF 335
R W R+ +V RK P S Y+N ++ ++F L K F
Sbjct: 365 RDWHTTKRIANVVRKQAPFLKMYSEYTNNYDRATKLFEELKKKKKF 410
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = -3
Query: 225 KTTTLWWIVGFKKSSWSFTQAKLRLTVSRSAAVTVVRFRYTCLSTINLLSPEGHN----L 58
KTT++W + +A L L S + VVR R + + PEG + L
Sbjct: 56 KTTSVWALARELLGD-KVKEAVLELNASDERGIDVVRHRIKTFAQTKVTLPEGRHKIIIL 114
Query: 57 QESESMT 37
E++SMT
Sbjct: 115 DEADSMT 121
>AF016438-13|AAK84531.2| 402|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 96 protein.
Length = 402
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +2
Query: 209 HKVVVFMGSPADQEHCQKIAKAARELGLDVDLRVTSAHKATEETLRIMQQYEDTHGALVF 388
H + F+G P+ HC+ + + +DV V A K E+ I + + + +L
Sbjct: 102 HSMSTFLGRPSFLLHCEPELASHSKTIIDVSYLVDVARKIFEKDATISHKSSNYYNSLEL 161
Query: 389 IAVA 400
+ +A
Sbjct: 162 LTLA 165
>AB060647-1|BAB43906.1| 826|Caenorhabditis elegans putative GDP-GTP
exchange factor protein.
Length = 826
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 472 RRWAVDDRVGSVPRKNGPESVRSSCYSNEHESTMRIFILLHNAKGF 335
R W R+ +V RK P S Y+N ++ ++F L K F
Sbjct: 365 RDWHTTKRIANVVRKQAPFLKMYSEYTNNYDRATKLFEELKKKKKF 410
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1732 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1791
Query: 425 VLSGN 439
L+GN
Sbjct: 1792 SLAGN 1796
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1754 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1813
Query: 425 VLSGN 439
L+GN
Sbjct: 1814 SLAGN 1818
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1545 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1604
Query: 425 VLSGN 439
L+GN
Sbjct: 1605 SLAGN 1609
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1852 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1911
Query: 425 VLSGN 439
L+GN
Sbjct: 1912 SLAGN 1916
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1732 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1791
Query: 425 VLSGN 439
L+GN
Sbjct: 1792 SLAGN 1796
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1754 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1813
Query: 425 VLSGN 439
L+GN
Sbjct: 1814 SLAGN 1818
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1545 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1604
Query: 425 VLSGN 439
L+GN
Sbjct: 1605 SLAGN 1609
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1852 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1911
Query: 425 VLSGN 439
L+GN
Sbjct: 1912 SLAGN 1916
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1563 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1622
Query: 425 VLSGN 439
L+GN
Sbjct: 1623 SLAGN 1627
>U88169-10|AAB42232.2| 231|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 4 protein.
Length = 231
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 284 LGLDVDLRVTSAHKATEETLRIMQQYEDTHGALVFIAVAGRSNGLGPV 427
L D R T + E L +MQ+Y +TH IA+ ++N LG V
Sbjct: 104 LNTSPDARPTVKYIDNLEHLYVMQRYRETHD-FTHIALEQKTNMLGEV 150
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +2
Query: 77 DKRLMVD--KQVYRNLTTVT--AADLDTVKRNFAWVKDQLDFLKPTIHHKVVVFMGSPAD 244
D+R+ V K+ ++ +T A D+D AW+ D ++ I + + SP+D
Sbjct: 246 DERMTVRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSD 305
Query: 245 QEHCQKIAKAAREL 286
+ +++ +A +L
Sbjct: 306 EREARRVEEAGGQL 319
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +2
Query: 77 DKRLMVD--KQVYRNLTTVT--AADLDTVKRNFAWVKDQLDFLKPTIHHKVVVFMGSPAD 244
D+R+ V K+ ++ +T A D+D AW+ D ++ I + + SP+D
Sbjct: 246 DERMTVRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSD 305
Query: 245 QEHCQKIAKAAREL 286
+ +++ +A +L
Sbjct: 306 EREARRVEEAGGQL 319
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 266 AKAARELGLDVDLRVTSAHKATEETLR-------IMQQYEDTHGALVFIAVAGRSNGLGP 424
A A R LG+D D EE + I ++Y+ G LV +A GLG
Sbjct: 1523 ADAMRALGIDDDSAAFQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGI 1582
Query: 425 VLSGN 439
L+GN
Sbjct: 1583 SLAGN 1587
>AF016436-2|AAC25898.1| 406|Caenorhabditis elegans Hypothetical
protein F38H12.3 protein.
Length = 406
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -1
Query: 203 SSASRNQAGLSPKQSCV*LCLDQLQSPL*GSGTPVCQPLIFYHRKATISKSQ 48
S++S + + + +SC +C D + G P C I + R+A I+KSQ
Sbjct: 18 STSSMSSSPSTSSESCA-VCGDSVNGKR--YGAPACLGCIVFFRRAVINKSQ 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,403,319
Number of Sequences: 27780
Number of extensions: 357730
Number of successful extensions: 902
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -