Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d15f
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 80 1e-15
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 39 0.003
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 39 0.003
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 39 0.003
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 39 0.003
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 39 0.003
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 36 0.028
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 30 1.1
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical pr... 28 5.7
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 80.2 bits (189), Expect = 1e-15
Identities = 49/146 (33%), Positives = 72/146 (49%)
Frame = +3
Query: 147 ISXDSSEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKXXXXXXXXX 326
+S +VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 29 VSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRNQARPTPAP 88
Query: 327 XXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSDPDMLRXVLDNP 506
S+ P M A ++L++PD +R V+DNP
Sbjct: 89 AAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDAMRSVMDNP 142
Query: 507 LVQQMMNDPENMRSLITSNPQMQDLM 584
+ QQ++ +PE MR++I SNPQ Q L+
Sbjct: 143 ITQQLLGNPEFMRTIIQSNPQFQALI 168
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 80.2 bits (189), Expect = 1e-15
Identities = 49/146 (33%), Positives = 72/146 (49%)
Frame = +3
Query: 147 ISXDSSEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKXXXXXXXXX 326
+S +VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 29 VSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRNQARPTPAP 88
Query: 327 XXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSDPDMLRXVLDNP 506
S+ P M A ++L++PD +R V+DNP
Sbjct: 89 AAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDAMRSVMDNP 142
Query: 507 LVQQMMNDPENMRSLITSNPQMQDLM 584
+ QQ++ +PE MR++I SNPQ Q L+
Sbjct: 143 ITQQLLGNPEFMRTIIQSNPQFQALI 168
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 80.2 bits (189), Expect = 1e-15
Identities = 49/146 (33%), Positives = 72/146 (49%)
Frame = +3
Query: 147 ISXDSSEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKXXXXXXXXX 326
+S +VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 29 VSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRNQARPTPAP 88
Query: 327 XXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSDPDMLRXVLDNP 506
S+ P M A ++L++PD +R V+DNP
Sbjct: 89 AAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDAMRSVMDNP 142
Query: 507 LVQQMMNDPENMRSLITSNPQMQDLM 584
+ QQ++ +PE MR++I SNPQ Q L+
Sbjct: 143 ITQQLLGNPEFMRTIIQSNPQFQALI 168
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 80.2 bits (189), Expect = 1e-15
Identities = 49/146 (33%), Positives = 72/146 (49%)
Frame = +3
Query: 147 ISXDSSEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKXXXXXXXXX 326
+S +VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 29 VSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRNQARPTPAP 88
Query: 327 XXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSDPDMLRXVLDNP 506
S+ P M A ++L++PD +R V+DNP
Sbjct: 89 AAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDAMRSVMDNP 142
Query: 507 LVQQMMNDPENMRSLITSNPQMQDLM 584
+ QQ++ +PE MR++I SNPQ Q L+
Sbjct: 143 ITQQLLGNPEFMRTIIQSNPQFQALI 168
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 80.2 bits (189), Expect = 1e-15
Identities = 49/146 (33%), Positives = 72/146 (49%)
Frame = +3
Query: 147 ISXDSSEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKXXXXXXXXX 326
+S +VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 29 VSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRNQARPTPAP 88
Query: 327 XXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTFMDLQARMQQELLSDPDMLRXVLDNP 506
S+ P M A ++L++PD +R V+DNP
Sbjct: 89 AAATPT--ASSAPSSNPTPSSQPNPTNNPFAAMGGMGSPA----DILNNPDAMRSVMDNP 142
Query: 507 LVQQMMNDPENMRSLITSNPQMQDLM 584
+ QQ++ +PE MR++I SNPQ Q L+
Sbjct: 143 ITQQLLGNPEFMRTIIQSNPQFQALI 168
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 54.4 bits (125), Expect = 6e-08
Identities = 21/42 (50%), Positives = 34/42 (80%)
Frame = +3
Query: 459 ELLSDPDMLRXVLDNPLVQQMMNDPENMRSLITSNPQMQDLM 584
++L++PD +R V+DNP+ QQ++ +PE MR++I SNPQ Q L+
Sbjct: 109 DILNNPDAMRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALI 150
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +3
Query: 147 ISXDSSEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+S +VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 29 VSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIR 79
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 54.4 bits (125), Expect = 6e-08
Identities = 21/42 (50%), Positives = 34/42 (80%)
Frame = +3
Query: 459 ELLSDPDMLRXVLDNPLVQQMMNDPENMRSLITSNPQMQDLM 584
++L++PD +R V+DNP+ QQ++ +PE MR++I SNPQ Q L+
Sbjct: 109 DILNNPDAMRSVMDNPITQQLLGNPEFMRTIIQSNPQFQALI 150
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +3
Query: 147 ISXDSSEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+S +VL + EQ+C+I+ GKI+ D +TL QH I DG TVHLVI+
Sbjct: 29 VSELKDKVLVFVPTANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIR 79
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 182 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 334 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 182 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 334 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 486 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 638 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 790 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 182 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 334 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 486 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 638 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 790 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLR 832
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 171 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 299
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 35.5 bits (78), Expect = 0.028
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 165 EVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 296
E + K P Q LIFAGK MND T + + G +HLV+
Sbjct: 28 EKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVL 71
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 210 LIFAGKIMNDADTLKQHNIKDGLTVHLV 293
+I G+++N T++ I DG TVHLV
Sbjct: 63 VIAGGRVLNSTQTVQAAGISDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 210 LIFAGKIMNDADTLKQHNIKDGLTVHLV 293
+I G+++N T++ I DG TVHLV
Sbjct: 63 VIAGGRVLNSTQTVQAAGISDGQTVHLV 90
>Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical
protein F22D6.5 protein.
Length = 775
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 204 LCLIFAGKIMNDADTLKQHNIKDGLTVHLV 293
LCL+F MN + LK++ KDGL + V
Sbjct: 530 LCLVFENLSMNLRELLKKYGQKDGLHLKAV 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,924,748
Number of Sequences: 27780
Number of extensions: 214688
Number of successful extensions: 497
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -