Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d14r
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 250 MFNNVFILSLLVLMFRLYTSLLL 318
           +FN VF +SLLVL    + S++L
Sbjct: 239 LFNEVFGVSLLVLFGNSFLSIVL 261


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 250 MFNNVFILSLLVLMFRLYTSLLL 318
           +FN VF +SLLVL    + S++L
Sbjct: 257 LFNEVFGVSLLVLFGNSFLSIVL 279


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 286 LMFRLYTSLLLGP 324
           L F +Y SLLLGP
Sbjct: 290 LFFIVYVSLLLGP 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,153
Number of Sequences: 336
Number of extensions: 2538
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)