Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d13r
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    27   0.12 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.8  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 173 HRLFFHIFVHSVYNEHQTKHTKVAWFCTFSSC 78
           H+L   I  + ++  ++  H  + W CT ++C
Sbjct: 234 HQLLLTILTYLIWTIYEMYHLAILWSCTSTNC 265


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 155 IFVHSVYNEHQTKHTKVAWFCTFSSCFKTRWCSICCTSDTIQMRF*IK 12
           IF+ +V+     KH+K+A F         R+ S+    DT++ +  IK
Sbjct: 87  IFIVTVWMTGAVKHSKIAHFLNKMIRLDERFQSVGLQIDTVREKRRIK 134


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 120 KTYKSCLVLHLLELLQNKVVLYLLHLRHN 34
           KT K+C ++ +  L+   V+LY   L  N
Sbjct: 37  KTDKNCTIVIIFHLILFAVLLYFASLEKN 65


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 468 KWKSNDRVKN*RNVRK 421
           KWK ++++ N +NVR+
Sbjct: 287 KWKKDNKLPNTKNVRR 302


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 468 KWKSNDRVKN*RNVRK 421
           KWK ++++ N +NVR+
Sbjct: 287 KWKKDNKLPNTKNVRR 302


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 621 FKFIISNVLRINLHNVDTVD 680
           FK + SNV R+N    D +D
Sbjct: 606 FKELTSNVFRMNQFVYDAID 625


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,384
Number of Sequences: 336
Number of extensions: 2934
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)