Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d12r
         (740 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7681| Best HMM Match : Annexin (HMM E-Value=0)                      58   7e-09
SB_26806| Best HMM Match : Annexin (HMM E-Value=0)                     48   8e-06
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)                34   0.11 
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  

>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 426

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIGP 559
           +GAGTDD  L+R++ +R+EVDL  +K  + + + KT+   I +G+ SGDYK+ L+AL  P
Sbjct: 98  KGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMI-EGDCSGDYKKLLMALPSP 156


>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 829

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 21/58 (36%), Positives = 36/58 (62%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
           +G GT +  L+ IL TR+  ++  +K EY K + ++L  D+ + ETSGD++  L  L+
Sbjct: 526 KGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDM-KSETSGDFENLLETLL 582



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 16/38 (42%), Positives = 29/38 (76%)
 Frame = -3

Query: 678 DLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
           ++D++K EY+K +  +L+ D+ + ETSGD++  LVAL+
Sbjct: 87  NIDSIKEEYQKKYGCSLEDDVKE-ETSGDFEDLLVALM 123



 Score = 33.9 bits (74), Expect = 0.14
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -3

Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
           GTD+   + IL+ R+   +  V  EY+ L      +D  + E  GD + AL+ LI
Sbjct: 613 GTDEDQFITILSQRSSAHVQAVLAEYKTLSGGVSLADTVRDEMKGDLRDALLVLI 667


>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
          Length = 803

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -3

Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
           GTD+ A +R+   R+   +  +  EY+KL    ++  I + E  GD ++A + L+
Sbjct: 138 GTDEGAFIRVFTQRSFTQISAMCAEYKKLTKVEIEESIDK-EMDGDMQKAFLTLV 191


>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3176

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 486 KYSRNKKQSV*HRMDASNSKGLLKLVR*GLPEPFCSLQRSLPARCR 623
           +Y  NK     H+M+ SNS+  +K V+    +     Q S PAR +
Sbjct: 653 EYEANKMNRAAHKMEDSNSQSSMKSVQLAGEKTSSGCQDSSPARAQ 698


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,191,058
Number of Sequences: 59808
Number of extensions: 344442
Number of successful extensions: 649
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)