Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d12r
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 60 2e-09
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 60 2e-09
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 48 5e-06
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed ... 28 6.0
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 28 8.0
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/58 (44%), Positives = 45/58 (77%)
Frame = -3
Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
+G GT D L+R++ TR+EVDL+ +K E+++L+ K+L +D +G+TSG Y+ AL+++I
Sbjct: 258 KGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSL-ADTVKGDTSGAYRDALLSII 314
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -3
Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIGP 559
+G GTD+ L+ IL +R L +++ YEK + K L++DI+ G+TSG+++ LV+L+
Sbjct: 98 KGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIA-GDTSGEFRDLLVSLVTG 156
Query: 558 A*EG 547
+ +G
Sbjct: 157 SKDG 160
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/58 (44%), Positives = 45/58 (77%)
Frame = -3
Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
+G GT D L+R++ TR+EVDL+ +K E+++L+ K+L +D +G+TSG Y+ AL+++I
Sbjct: 258 KGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSL-ADTVKGDTSGAYRDALLSII 314
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -3
Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIGP 559
+G GTD+ L+ IL +R L +++ YEK + K L++DI+ G+TSG+++ LV+L+
Sbjct: 98 KGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIA-GDTSGEFRDLLVSLVTG 156
Query: 558 A*EG 547
+ +G
Sbjct: 157 SKDG 160
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/58 (37%), Positives = 39/58 (67%)
Frame = -3
Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
+G GT D L+R+ TRAE D+ +++ ++ L+ +L++ I +G+ SG YK L+AL+
Sbjct: 394 KGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENMI-KGDCSGAYKEGLIALV 450
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = -3
Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVAL 568
+G GT + L+ I+ +R + V+ Y+ LF K L+ D+ GETSG +KR LV+L
Sbjct: 235 EGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLI-GETSGHFKRLLVSL 290
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -3
Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
GTD+ ILA++ L V EY+K + +++ I + E SGD + L+A+I
Sbjct: 322 GTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAI-EFEFSGDIRDGLLAVI 375
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/58 (37%), Positives = 39/58 (67%)
Frame = -3
Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
+G GT D L+R+ TRAE D+ +++ ++ L+ +L++ I +G+ SG YK L+AL+
Sbjct: 436 KGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENMI-KGDCSGAYKEGLIALV 492
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = -3
Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVAL 568
+G GT + L+ I+ +R + V+ Y+ LF K L+ D+ GETSG +KR LV+L
Sbjct: 277 EGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLI-GETSGHFKRLLVSL 332
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -3
Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
GTD+ ILA++ L V EY+K + +++ I + E SGD + L+A+I
Sbjct: 364 GTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAI-EFEFSGDIRDGLLAVI 417
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = -3
Query: 723 DDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
D ++RI +R+E+DL ++ LEY++ + + L+ DI Q TSG+Y R + L+
Sbjct: 281 DQSTIIRICVSRSEIDLQDISLEYKRKYQRPLEHDICQ-STSGEYTRMICTLL 332
>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical protein
R10E8.6 protein.
Length = 1696
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 248 FSYLSLFSCFNLNKMNVLSNCTILFIFIQKK----LLYFYDKS 364
F L L +CF + N++ NC + + + +K L YF D+S
Sbjct: 1351 FDMLRLVTCFPMVMKNIVDNCAFVSVEVLRKVCKDLRYFVDRS 1393
>Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical
protein F26A3.3 protein.
Length = 1632
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -3
Query: 660 LEYEKLFDKTLQSDISQG--ETSGDYKRALVALIGPA*EGLCCWKHPFDVIQIASYSSNI 487
+ E L D Q IS + S D +L + P+ +HP D ++I YSS +
Sbjct: 712 ISIEPLLDNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSSPV 771
Query: 486 YNNVNKDYLKKL 451
+NK ++ L
Sbjct: 772 PVALNKPFINIL 783
>AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed RNA
polymerase relatedEGO-1 protein.
Length = 1632
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -3
Query: 660 LEYEKLFDKTLQSDISQG--ETSGDYKRALVALIGPA*EGLCCWKHPFDVIQIASYSSNI 487
+ E L D Q IS + S D +L + P+ +HP D ++I YSS +
Sbjct: 712 ISIEPLLDNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSSPV 771
Query: 486 YNNVNKDYLKKL 451
+NK ++ L
Sbjct: 772 PVALNKPFINIL 783
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 720 DRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKR 583
D L+R + T+AEV + + ++L + L S S SGD KR
Sbjct: 957 DEPLIRQIKTKAEVCIVHCFKSIDELRARMLSSSSSTAANSGDGKR 1002
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,662,077
Number of Sequences: 27780
Number of extensions: 273813
Number of successful extensions: 605
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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