Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d12r
         (740 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to calcium-b...    58   5e-09
At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to ca...    54   1e-07
At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to an...    54   1e-07
At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin (...    52   5e-07
At1g35720.1 68414.m04440 annexin 1 (ANN1) identical to annexin (...    52   5e-07
At5g12380.1 68418.m01456 annexin, putative similar to annexin [F...    51   9e-07
At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to ca...    46   2e-05
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p...    32   0.35 
At5g52260.1 68418.m06486 myb family transcription factor (MYB19)...    27   9.9  
At1g53730.1 68414.m06114 leucine-rich repeat transmembrane prote...    27   9.9  

>At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to
           calcium-binding protein annexin 5 [Arabidopsis thaliana]
           GI:12667520
          Length = 316

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 27/60 (45%), Positives = 41/60 (68%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIGP 559
           +G GTDD AL+RI+ TRAEVD+  +  EY K + KTL + +   +T+  Y+  L++L+GP
Sbjct: 256 KGLGTDDTALIRIVVTRAEVDMQFIITEYRKRYKKTLYNAV-HSDTTSHYRTFLLSLLGP 314



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALV 574
           +G G D   ++ ILA R       ++ EYE  F   L+  +   E  G  K+A++
Sbjct: 25  KGRGCDTSVIINILAHRNATQRALIEQEYETKFSDDLRKRL-HSELHGHLKKAVL 78


>At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to
           calcium-binding protein annexin 6 [Arabidopsis thaliana]
           GI:12667518
          Length = 318

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 28/56 (50%), Positives = 38/56 (67%)
 Frame = -3

Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIG 562
           GTD+ AL R++ TRAEVDL+ +K EY +     L   I+  +TSGDYK  L+AL+G
Sbjct: 260 GTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIA-NDTSGDYKDMLLALLG 314



 Score = 32.3 bits (70), Expect = 0.35
 Identities = 16/55 (29%), Positives = 31/55 (56%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALV 574
           +G GT++  ++ ILA R       ++  Y   ++K L  ++  GE SGD++R ++
Sbjct: 25  KGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKEL-DGELSGDFERVVM 78


>At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to
           annexin (AnnAt3) [Arabidopsis thaliana] GI:6503082;
           contains Pfam profile PF00191: Annexin
          Length = 321

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 24/59 (40%), Positives = 41/59 (69%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIG 562
           +G GTD+ +L R + TRAE+DL  V+ EY  +++ ++ + I+ G+ SGDYK  ++ L+G
Sbjct: 261 EGFGTDEDSLTRAIVTRAEIDLMKVRGEYFNMYNTSMDNAIT-GDISGDYKDFIITLLG 318



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 17/56 (30%), Positives = 35/56 (62%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVA 571
           +G GTD++A++R+L  R +     ++  + +++ K L  D+   E SGD+ +A+V+
Sbjct: 25  RGWGTDEKAIIRVLGQRDQSQRRKIRESFREIYGKDL-IDVLSSELSGDFMKAVVS 79


>At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin
           (AnnAt2) [Arabidopsis thaliana] GI:4959108
          Length = 317

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 25/56 (44%), Positives = 38/56 (67%)
 Frame = -3

Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIG 562
           GTD+  L R++ TR EVD++ +K EY++     L   I++ +TSGDY+  LVAL+G
Sbjct: 259 GTDEWGLTRVVTTRTEVDMERIKEEYQRRNSIPLDRAIAK-DTSGDYEDMLVALLG 313



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = -3

Query: 735 GAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALV 574
           G GT+++ ++ ILA R       ++  Y   +++ L   + + E S D++RA++
Sbjct: 26  GWGTNEKLIISILAHRNAAQRSLIRSVYAATYNEDLLKALDK-ELSSDFERAVM 78



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = -3

Query: 720 DRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALI 565
           D   +RIL TR++  L      Y   +   +  ++ +     DY + L A+I
Sbjct: 186 DDDFIRILTTRSKAQLGATLNHYNNEYGNAINKNLKEESDDNDYMKLLRAVI 237


>At1g35720.1 68414.m04440 annexin 1 (ANN1) identical to annexin
           (AnnAt1) [Arabidopsis thaliana] GI:4959106
          Length = 317

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = -3

Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIG 562
           GTD+ AL RI+ TRAE+DL  +  EY++     L+  I++ +T GDY++ LVAL+G
Sbjct: 259 GTDEGALTRIVTTRAEIDLKVIGEEYQRRNSIPLEKAITK-DTRGDYEKMLVALLG 313



 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/55 (25%), Positives = 31/55 (56%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALV 574
           +G GT++  ++ ILA R+      ++  Y + + + L   + + E S D++RA++
Sbjct: 25  EGWGTNEDLIISILAHRSAEQRKVIRQAYHETYGEDLLKTLDK-ELSNDFERAIL 78


>At5g12380.1 68418.m01456 annexin, putative similar to annexin
           [Fragaria x ananassa] GI:6010777, annexin p33 [Zea mays]
           GI:6272285; contains Pfam profile PF00191: Annexin
          Length = 316

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 28/56 (50%), Positives = 38/56 (67%)
 Frame = -3

Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIG 562
           GTD+ AL R++ TRAE DL N+   Y K  + +L   I++ ETSGDYK  L+AL+G
Sbjct: 257 GTDEDALNRVIVTRAEKDLTNITGLYFKRNNVSLDQAIAK-ETSGDYKAFLLALLG 311


>At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to
           calcium-binding protein annexin 7 [Arabidopsis thaliana]
           GI:12667522
          Length = 316

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = -3

Query: 729 GTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALVALIG 562
           GTD+  L R++ TRAE D++ +K EY +     L   I++ +T GDY+  L+AL+G
Sbjct: 258 GTDEWGLTRVVTTRAEFDMERIKEEYIRRNSVPLDRAIAK-DTHGDYEDILLALLG 312



 Score = 34.7 bits (76), Expect = 0.065
 Identities = 17/55 (30%), Positives = 33/55 (60%)
 Frame = -3

Query: 738 QGAGTDDRALVRILATRAEVDLDNVKLEYEKLFDKTLQSDISQGETSGDYKRALV 574
           +G GT++R ++ ILA R       ++  Y   ++K L  ++ + E SGD++RA++
Sbjct: 25  KGWGTNERMIISILAHRNATQRSFIRAVYAANYNKDLLKELDR-ELSGDFERAVM 78


>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
           protein contains Pfam profile PF01480: PWI domain
          Length = 878

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 591 SLQRSL-PARCRFEGSCRTASRTPA*RYRGLPRRGWRGS*PEPYRRCRRPA 740
           S++RSL P R R     R+ SR+P  R+R     G R S P P RR R P+
Sbjct: 265 SVRRSLSPRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQS-PAPSRRRRSPS 314


>At5g52260.1 68418.m06486 myb family transcription factor (MYB19)
           contains PFAM profile: Myb DNA binding domain PF00249
          Length = 268

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -1

Query: 620 TSRRERPLETT-KGLW*PSSDQLKKAFAVGSIHS 522
           T   ERP +   KGLW P  DQ  K+F +   H+
Sbjct: 2   TKSGERPKQRQRKGLWSPEEDQKLKSFILSRGHA 35


>At1g53730.1 68414.m06114 leucine-rich repeat transmembrane protein
           kinase, putative similar to GI:3360289 from [Zea mays]
           (Plant Mol. Biol. 37 (5), 749-761 (1998))
          Length = 719

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 532 LPTAKAFLSWSDEGYQSPFVVSRG 603
           LPTA   L+ +DEGY +P V   G
Sbjct: 569 LPTANELLNQTDEGYSAPEVSMSG 592


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,362,266
Number of Sequences: 28952
Number of extensions: 237574
Number of successful extensions: 555
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)