Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d12f
         (624 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47771| Best HMM Match : Annexin (HMM E-Value=0)                    103   2e-22
SB_37033| Best HMM Match : Annexin (HMM E-Value=0)                    101   6e-22
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)                 87   8e-18
SB_26806| Best HMM Match : Annexin (HMM E-Value=0)                     68   7e-12
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)                61   6e-10
SB_7681| Best HMM Match : Annexin (HMM E-Value=0)                      51   9e-07
SB_29977| Best HMM Match : IL8 (HMM E-Value=1)                         30   1.3  
SB_24047| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_37480| Best HMM Match : rve (HMM E-Value=4.7e-22)                   27   9.4  

>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 529

 Score =  103 bits (246), Expect = 2e-22
 Identities = 50/104 (48%), Positives = 70/104 (67%)
 Frame = +1

Query: 295 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIE 474
           TVV   NF+A + A  L+ AMKGFG+DE+AII++L + +  QR AI+Q+F ++Y +DL+ 
Sbjct: 295 TVVAAENFDAGDCAEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVN 354

Query: 475 DLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLV 606
           +LKSEL G FED IVAL+ PPE+     LH  M+      D +V
Sbjct: 355 ELKSELSGKFEDAIVALLLPPEQLDANALHGAMQAKRVSADEIV 398



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/99 (23%), Positives = 48/99 (48%)
 Frame = +1

Query: 328 EDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFE 507
           +D   L+ A++         + +       + + +S  + + Y +DL+E L  ++     
Sbjct: 47  DDITKLQKAIEKSDKKTATEVIVCNASDEGKLKKLSDEYNKRYEKDLVEQLDGKVADDVH 106

Query: 508 DVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTR 624
           + + +L+ P  +   + L+  M+G+GT E  L+E LCTR
Sbjct: 107 EAVTSLLLPATQADVRSLYYAMKGLGTKEAQLIETLCTR 145



 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
 Frame = +1

Query: 322 AVEDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGG 498
           A EDA  L  A  K +GTDE     ILT RS++Q +A+ QA+      D++E +  EL G
Sbjct: 403 AYEDAKNLYEAGEKKWGTDESVFTKILTCRSDLQLRALYQAYQHVAKCDILETIDDELTG 462

Query: 499 HFEDVIVAL 525
            + D + A+
Sbjct: 463 DYHDAVKAI 471



 Score = 31.9 bits (69), Expect = 0.43
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +1

Query: 331 DAAALRAAMKGFGTDEQAIIDILTTRSN 414
           D  +L  AMKG GT E  +I+ L TRSN
Sbjct: 120 DVRSLYYAMKGLGTKEAQLIETLCTRSN 147


>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 287

 Score =  101 bits (241), Expect = 6e-22
 Identities = 45/86 (52%), Positives = 64/86 (74%)
 Frame = +1

Query: 367 GTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEEY 546
           G D +A++ +L +R+N QRQ IS  +   +GRDLI+DLKSE+GG+FED ++ALMTPP EY
Sbjct: 101 GCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIALMTPPAEY 160

Query: 547 LCQELHRCMEGMGTDEDTLVEILCTR 624
               L + ++G+GTDE  L+E+L TR
Sbjct: 161 DATLLRKAIKGLGTDEAVLIEVLTTR 186



 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
 Frame = +1

Query: 295 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIE 474
           TV+ +    A  DA  LR A+KG GTDE  +I++LTTR+N +  AI  A+   + RDL +
Sbjct: 149 TVIALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEK 208

Query: 475 DLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEG-MGTDEDTLVEILCTR 624
           D+  +  G F+  +++        LC  L++  EG  GTDE     IL +R
Sbjct: 209 DIAGDTSGKFKKFLIS--------LCNALYKAGEGRWGTDESKFNSILASR 251


>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
          Length = 146

 Score = 87.4 bits (207), Expect = 8e-18
 Identities = 42/85 (49%), Positives = 57/85 (67%)
 Frame = +1

Query: 370 TDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEEYL 549
           T+E  +I IL  RSN QR  I + +   YG+DL+ DLKSEL G+ E+ ++A+M P   Y 
Sbjct: 2   TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAMMEPSVLYD 61

Query: 550 CQELHRCMEGMGTDEDTLVEILCTR 624
            + L R M G GTDE+TL++ILCTR
Sbjct: 62  AKCLRRGMRGAGTDEETLIDILCTR 86



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = +1

Query: 331 DAAALRAAMKGFGTDEQAIIDILTTRSN 414
           DA  LR  M+G GTDE+ +IDIL TRSN
Sbjct: 61  DAKCLRRGMRGAGTDEETLIDILCTRSN 88


>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 829

 Score = 67.7 bits (158), Expect = 7e-12
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = +1

Query: 331 DAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED 510
           D  +L  AMKG GT E  +I+IL TRSN + Q I Q + ++YGR L +D+KSE  G FE+
Sbjct: 517 DVRSLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFEN 576

Query: 511 VIVALM 528
           ++  L+
Sbjct: 577 LLETLL 582



 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 24/99 (24%), Positives = 48/99 (48%)
 Frame = +1

Query: 328 EDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFE 507
           +D   L+ A+          I +       + + ++  + + Y +DL+E L  ++     
Sbjct: 444 DDITKLQKAIDKSDKKTTTAIIVSNASDEGKLKKLNDEYNKRYKKDLVEQLDGKVAIDVH 503

Query: 508 DVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTR 624
           + + +L+ P  +   + L+  M+G+GT E  L+EILCTR
Sbjct: 504 EAVTSLLLPATKADVRSLYYAMKGLGTKEAQLIEILCTR 542



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +1

Query: 328 EDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAISQAF-TREYGRDLIEDLKSELGGH 501
           +DAAAL  A +  +GTDE   I IL+ RS+   QA+   + T   G  L + ++ E+ G 
Sbjct: 599 KDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYKTLSGGVSLADTVRDEMKGD 658

Query: 502 FEDVIVALMT 531
             D ++ L++
Sbjct: 659 LRDALLVLIS 668



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = +1

Query: 427 AISQAFTREYGRDLIEDLKSELGGHFEDVIVALMT 531
           +I + + ++YG  L +D+K E  G FED++VALM+
Sbjct: 90  SIKEEYQKKYGCSLEDDVKEETSGDFEDLLVALMS 124



 Score = 35.9 bits (79), Expect = 0.027
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query: 322 AVEDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTR 450
           A +DA AL  A +K +GTDE   I+I TTRS  Q QA+   +++
Sbjct: 171 AHKDAEALIEAGIKKWGTDEDCFIEIFTTRSYPQLQAMFPEYSK 214



 Score = 32.3 bits (70), Expect = 0.33
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +1

Query: 328 EDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAISQAF-TREYGRDLIEDLKSEL 492
           +DAAAL  A +  +GT+E   I ILT RS+   QA+   + T   G  L + ++ E+
Sbjct: 772 QDAAALVSAGVARWGTEEDQFITILTQRSSAHVQAVLAEYRTLSGGVTLADTIRDEM 828


>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
          Length = 803

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
 Frame = +1

Query: 322 AVEDAAALRAAMKGFGTD--EQAIIDILTT----RSNMQRQAISQAFTREYGRDLIEDLK 483
           A EDA  L  A++G  ++  + AIIDIL      RS + R  +   +  ++ +D++E L+
Sbjct: 346 AKEDADELHQAIQGMVSEGNKDAIIDILARNCDERSKLDR--LKDKYKDQHDQDILEALQ 403

Query: 484 SELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTR 624
             LG   +D + +  +    +  + LH  ++G+GTDED L+EI+CTR
Sbjct: 404 PHLGDDVKDPVESFFSSSSAFDAKCLHDAIKGLGTDEDLLIEIICTR 450



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
 Frame = +1

Query: 373 DEQAIIDILTTRSNMQRQ-AISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEEYL 549
           D++ I+ IL   S   +   +   +   Y +DL E+LKS L    E+++ AL +  EE  
Sbjct: 21  DKERIMGILGRTSEKDKMNKLEDKYKDLYKKDLNEELKSVLD---EEIMKALESLAEEAA 77

Query: 550 CQE---LHRCMEGMGTDEDTLVEILCTR 624
            ++   L+   +G GTDED L+ ILCTR
Sbjct: 78  MKDAKTLYEATKGFGTDEDALISILCTR 105



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
 Frame = +1

Query: 322 AVEDAAALRAAMKGFGTDEQAIIDILTTRSNM-QRQAISQA---FTREYGRDLIE 474
           A++DA  L  A KGFGTDE A+I IL TRSN  QR    +A     ++  +DL+E
Sbjct: 77  AMKDAKTLYEATKGFGTDEDALISILCTRSNKGQRDESKEADIHLAKKDAKDLME 131



 Score = 35.1 bits (77), Expect = 0.047
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +1

Query: 331 DAAALRAAMKGFGTDEQAIIDILTTRSN 414
           DA  L  A+KG GTDE  +I+I+ TR N
Sbjct: 425 DAKCLHDAIKGLGTDEDLLIEIICTRKN 452


>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 426

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
 Frame = +1

Query: 322 AVEDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGG 498
           A ++A  L +A  K +GTDE     +L +RS  Q QA    + +   RD++  +  E+ G
Sbjct: 14  ATKEAQDLYKAGEKKWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNSIDREMSG 73

Query: 499 HFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTR 624
             +  +      P EY    L + M+G GTD+  L+ ++ +R
Sbjct: 74  DLKAGLQCARN-PAEYFADRLWKSMKGAGTDDSLLIRVVVSR 114



 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 18/67 (26%), Positives = 40/67 (59%)
 Frame = +1

Query: 334 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDV 513
           A  L  +MKG GTD+  +I ++ +RS +    I  +F ++Y + + + ++ +  G ++ +
Sbjct: 90  ADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGDYKKL 149

Query: 514 IVALMTP 534
           ++AL +P
Sbjct: 150 LMALPSP 156


>SB_29977| Best HMM Match : IL8 (HMM E-Value=1)
          Length = 521

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +1

Query: 130 EILYTALIKRNCFFYNSHTVSPS*KFGSAENRRSPFSIFDTNPRILTEMAYQRAPTVVG 306
           +ILY    KR    ++S + + S  FGSA N  + + I  T+   L+ +A  R P  +G
Sbjct: 176 QILYIVHSKRAALLFSSQSPAVSSWFGSAYNTLAKYFILFTSREQLSCLAVSRQPFRLG 234


>SB_24047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2905

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 589  PCPYPPYNGAALGTDTPQGESSEP 518
            PCP  P+     GT TPQG + EP
Sbjct: 1712 PCPSQPHITICPGTGTPQGITIEP 1735


>SB_37480| Best HMM Match : rve (HMM E-Value=4.7e-22)
          Length = 900

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 397 LTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFE 507
           L  R  M+R+ + Q + REY   L+E  + + G HF+
Sbjct: 340 LHARLMMKREQVWQRWRREYIHSLMESHRVKRGEHFD 376


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,340,855
Number of Sequences: 59808
Number of extensions: 434461
Number of successful extensions: 1088
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)