Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d11r
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 77 2e-14
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 69 2e-12
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 69 4e-12
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 61 6e-10
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 45 4e-05
At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein ... 39 0.003
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 37 0.011
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 35 0.046
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 35 0.061
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 33 0.14
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 33 0.25
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 33 0.25
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 32 0.32
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 32 0.43
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 32 0.43
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 32 0.43
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 32 0.43
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 31 0.57
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 31 0.57
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 31 0.57
At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein ... 31 0.57
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 0.57
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 31 0.75
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 31 0.75
At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein ... 31 0.75
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 31 0.75
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 31 0.99
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 31 0.99
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 31 0.99
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 31 0.99
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 30 1.3
At5g48890.1 68418.m06048 hypothetical protein 30 1.7
At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein ... 30 1.7
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 30 1.7
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 30 1.7
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 30 1.7
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 29 2.3
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 29 2.3
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 29 2.3
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 29 3.0
At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein ... 29 3.0
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 4.0
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 29 4.0
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 29 4.0
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 28 5.3
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 28 5.3
At4g01985.1 68417.m00265 expressed protein 28 5.3
At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family ... 28 5.3
At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein ... 28 5.3
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 28 7.0
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 28 7.0
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 28 7.0
At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein ... 27 9.2
At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein ... 27 9.2
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 27 9.2
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = -2
Query: 473 CSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFE 294
CSY GCGK +F S L+ H+ H GER + C GC ++F S +L RH HTGE+ +
Sbjct: 81 CSYDGCGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYI 139
Query: 293 CRV--CNRRFMRSDHLAKHVKRHAKE 222
C C + F +L H+K H++E
Sbjct: 140 CTYEGCGKAFSLDFNLRSHMKTHSQE 165
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -2
Query: 479 YECSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKK 300
Y C GCGK + SS LK H HTGER + C + GC + FS L H +TH+ E
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENY 167
Query: 299 FECRV--CNRRFMRSDHLAKHV 240
C C +R+ L HV
Sbjct: 168 HICPYSGCVKRYAHEYKLKNHV 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 404 TGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFEC--RVCNRRFMRSDHLAKHVKRH 231
T E F C++ GC + F L +H H GE+++ C C ++F+ S L +H H
Sbjct: 74 TTEILFLCSYDGCGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIH 132
Query: 230 AKEK 219
E+
Sbjct: 133 TGER 136
Score = 31.5 bits (68), Expect(2) = 0.025
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 404 TGERPFRCAWPGCERRFSRSDELSRH-KRTHTGEKKFE 294
+ +RP+ C + GCE+ + +L H KR H G + E
Sbjct: 225 SSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEE 262
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -2
Query: 479 YECSYPGCGKNYFKSSHLKAH-ARTHTG 399
Y C Y GC K Y LK H R H G
Sbjct: 230 YACPYEGCEKAYIHEYKLKLHLKREHPG 257
Score = 23.4 bits (48), Expect(2) = 0.025
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 473 CSYPGCGKNYFKSSHLKAHARTH 405
C Y GC K Y LK H +
Sbjct: 170 CPYSGCVKRYAHEYKLKNHVAAY 192
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = -2
Query: 473 CSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFE 294
C++ GCGK + +L H R H ERPF C+W GC F + H R HTGE+ +
Sbjct: 1240 CTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYI 1299
Query: 293 CRV--CNRRFMRSDHLAKHVKR 234
C+V C F ++H ++
Sbjct: 1300 CKVDGCGLSFRFVSDYSRHRRK 1321
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -2
Query: 479 YECSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKR 321
+ECS+ GC + H R HTGERP+ C GC F + SRH+R
Sbjct: 1268 FECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRR 1320
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = -2
Query: 473 CSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFE 294
C GC + + L+ H R RC GC ++F L H+R H E+ FE
Sbjct: 1217 CYLEGCKMTFESKAKLQTHKRN-------RCTHEGCGKKFRAHKYLVLHQRVHKDERPFE 1269
Query: 293 C--RVCNRRFMRSDHLAKHVKRHAKEK 219
C + C+ F +H++ H E+
Sbjct: 1270 CSWKGCSMTFKWQWARTEHLRLHTGER 1296
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -2
Query: 404 TGERPFRCAWPGCERRFSRSDELSRHKR---THTGEKKFECRVCNRRFMRSDHLAKHVKR 234
T P RC GC+ F +L HKR TH G C ++F +L H +
Sbjct: 1210 TTTHPNRCYLEGCKMTFESKAKLQTHKRNRCTHEG--------CGKKFRAHKYLVLHQRV 1261
Query: 233 HAKEK 219
H E+
Sbjct: 1262 HKDER 1266
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 68.5 bits (160), Expect = 4e-12
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = -2
Query: 473 CSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFE 294
C GCGKN+F +L H R H+ +RP +C W GC+ F + + H R HTG + +
Sbjct: 1262 CPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYV 1321
Query: 293 CRV--CNRRFMRSDHLAKHVKR 234
C C + F ++H ++
Sbjct: 1322 CAEPDCGQTFRFVSDFSRHKRK 1343
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -2
Query: 476 ECSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKR 321
+C + GC + + H R HTG RP+ CA P C + F + SRHKR
Sbjct: 1291 KCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKR 1342
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -2
Query: 389 FRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
++C GC FS +L HKR K C + F +L +H + H+ ++
Sbjct: 1237 YQCNMEGCTMSFSSEKQLMLHKRNICPIKG-----CGKNFFSHKYLVQHQRVHSDDR 1288
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFEC--RV 285
CG + K +HLK H ++H+ ER F C C + R D L+RH TH G K F+C
Sbjct: 71 CGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKEN 129
Query: 284 CNRRFMRSDHLAKHVKRH 231
C F ++ +HVK++
Sbjct: 130 CKSEFSVQGNVGRHVKKY 147
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 476 ECSYPGCGKNYFKSSHLKAHART-HTGERPFRCAWPGCERRFSRSDELSRHKRT 318
+C GC + K+S+L+ H + H RPF C +PGC RF+ ++H+ +
Sbjct: 306 KCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 359
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 YECSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRH-KRTHTGEK 303
+ C C +Y + HL H TH G + F+C C+ FS + RH K+ H+ +
Sbjct: 94 FTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYHSNDN 152
Query: 302 K 300
+
Sbjct: 153 R 153
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = -2
Query: 473 CSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTH-----TG 309
CS PGC K + LK+H R + + C G + + RH RTH G
Sbjct: 249 CSEPGCMKYFTNEECLKSHIR--SCHQHINCEICGSKH---LKKNIKRHLRTHDEDSSPG 303
Query: 308 EKKFECRVCNRRFMRSDHLAKHVK 237
E K E C+ F ++ +L KH+K
Sbjct: 304 EIKCEVEGCSSTFSKASNLQKHMK 327
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 416 ARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFE--CRV--CNRRFMRSDHLA 249
A TG++ C GC + F +L +H+ +H E C C + F + L
Sbjct: 206 AECSTGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLK 265
Query: 248 KHVK 237
H++
Sbjct: 266 SHIR 269
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 476 ECSYPGCGKNYFKSSHLKAHART-HTGERPFRCAWPGCERRFSRSDELSRHKRT 318
+C GC + K+S+L+ H + H RPF C +PGC RF+ ++H+ +
Sbjct: 218 KCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 271
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 398 ERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFEC--RVCNRRFMRSDHLAKHVKRH 231
ER F C C + R D L+RH TH G K F+C C F ++ +HVK++
Sbjct: 3 ERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKY 59
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 YECSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRH-KRTHTGEK 303
+ C C +Y + HL H TH G + F+C C+ FS + RH K+ H+ +
Sbjct: 6 FTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYHSNDN 64
Query: 302 K 300
+
Sbjct: 65 R 65
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = -2
Query: 473 CSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTH-----TG 309
CS PGC K + LK+H R + + C G + + RH RTH G
Sbjct: 161 CSEPGCMKYFTNEECLKSHIR--SCHQHINCEICGSKH---LKKNIKRHLRTHDEDSSPG 215
Query: 308 EKKFECRVCNRRFMRSDHLAKHVK 237
E K E C+ F ++ +L KH+K
Sbjct: 216 EIKCEVEGCSSTFSKASNLQKHMK 239
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 416 ARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFE--CRV--CNRRFMRSDHLA 249
A TG++ C GC + F +L +H+ +H E C C + F + L
Sbjct: 118 AECSTGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLK 177
Query: 248 KHVK 237
H++
Sbjct: 178 SHIR 181
>At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 240
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2
Query: 332 RHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
R K+T G K++ECR C+ +F +S L H+ RH +E+
Sbjct: 73 REKQTKDG-KEYECRFCSLKFFKSQALGGHMNRHRQER 109
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 338 LSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
L++H +HT + FEC+ CN+RF L H H K K
Sbjct: 35 LNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPK 73
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 35.1 bits (77), Expect = 0.046
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 311 GEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
GE+K+EC+ C R F S L H H KE+
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKKER 99
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 350 RSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
R + S+ + +G K +ECR C+ +F +S L H+ RH +E+
Sbjct: 35 RKKKGSKEGKDESG-KVYECRFCSLKFCKSQALGGHMNRHRQER 77
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAHA+T G R ++C C FSR D H+
Sbjct: 164 CSKKYAVQSDWKAHAKT-CGTREYKC---DCGTLFSRKDSFITHR 204
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -2
Query: 347 SDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
+D ++ T +F C +CN+ F R +L H + H
Sbjct: 66 ADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGH 104
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAH++T G R +RC C FSR D H+
Sbjct: 147 CAKRYAVQSDWKAHSKT-CGTREYRC---DCGTIFSRRDSFITHR 187
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAH++T G R +RC C FSR D H+
Sbjct: 151 CAKRYAVQSDWKAHSKT-CGTREYRC---DCGTIFSRRDSFITHR 191
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAH++T G + +RC C FSR D H+
Sbjct: 181 CSKKYAVQSDCKAHSKT-CGTKEYRC---DCGTLFSRRDSFITHR 221
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 347 SDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
S+ ++ +T +F C +CN+ F R +L H + H
Sbjct: 83 SEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGH 121
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAH++T G + +RC C FSR D H+
Sbjct: 162 CSKRYAVQSDWKAHSKT-CGTKEYRC---DCGTLFSRRDSFITHR 202
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 353 SRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
S ++ ++ +T +F C VCN+ F R +L H + H
Sbjct: 63 SDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGH 103
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Frame = -2
Query: 428 LKAHARTHTGERPFRCAWPGC-----ERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMR 264
LK + + + C P C R + +H GEKK++C C++R+
Sbjct: 109 LKQKSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAV 168
Query: 263 SDHLAKHVK 237
H K
Sbjct: 169 QSDWKAHSK 177
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAHA+T G + ++C C FSR D H+
Sbjct: 174 CSKKYAVQSDWKAHAKT-CGTKEYKC---DCGTLFSRRDSFITHR 214
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 323 RTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
+T +F C VCN+ F R +L H + H
Sbjct: 84 KTLMATNRFICEVCNKGFQRDQNLQLHKRGH 114
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = -2
Query: 398 ERPFRCAWPGC-----ERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVK 237
++ + C PGC R + +H GEKK++C C++++ H K
Sbjct: 131 KKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAK 189
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 308 EKKFECRVCNRRFMRSDHLAKHVKRHAKEKA 216
E+KF C+ C++RF L H++ H E +
Sbjct: 6 ERKFVCKFCSKRFPCGKSLGGHIRTHMNENS 36
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 31.9 bits (69), Expect = 0.43
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = -2
Query: 473 CSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFE 294
C Y C K + L H R HT E + G +++ D+ + H +++
Sbjct: 11 CKY--CYKTFPSGKALGGHIRIHTNENSV--GYNGNKKK-RLVDQRKMMAQKHKQQQQVG 65
Query: 293 CRVCNRRFMRSDHLAKHVKRHAKEK 219
CR C R F+ L H+ H + K
Sbjct: 66 CRECGRVFVSLKALRGHMACHGEVK 90
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 320 THTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
T T +K F C C R F S L H H +E+
Sbjct: 54 TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRER 87
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 320 THTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
T T +K F C C R F S L H H +E+
Sbjct: 97 TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRER 130
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 347 SDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
++ +S RT ++ C +CN+ F R +L H +RH
Sbjct: 54 AEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRH 92
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHT 312
C K Y S KAH +T G R C C R FSR + H+ T T
Sbjct: 153 CSKGYAVQSDYKAHLKT-CGTRGHSC---DCGRVFSRVESFIEHQDTCT 197
>At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein
(ZFP6) identical to zinc finger protein, ZFP6
gi|790683|gb|AAA87302; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 197
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 305 KKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
+K+EC+ C R F S L H H KE+
Sbjct: 39 RKYECQYCCREFANSQALGGHQNAHKKER 67
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 347 SDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
++ +S RT ++ C +CN+ F R +L H +RH
Sbjct: 23 AEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRH 61
Score = 30.7 bits (66), Expect = 0.99
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHT 312
C K Y S KAH +T G R C C R FSR + H+ T T
Sbjct: 123 CSKGYAVQSDYKAHLKT-CGSRGHSC---DCGRVFSRVESFIEHQDTCT 167
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAH++T G + +RC C FSR D H+
Sbjct: 164 CSKRYAVQSDWKAHSKT-CGTKEYRC---DCGTIFSRRDSYITHR 204
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 323 RTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
+T +F C VCN+ F R +L H + H
Sbjct: 75 KTLMATNRFICDVCNKGFQREQNLQLHRRGH 105
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Frame = -2
Query: 428 LKAHARTHTGERPFRCAWPGC-----ERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMR 264
LK + + + C P C R + +H GEKK++C C++R+
Sbjct: 111 LKQKSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAV 170
Query: 263 SDHLAKHVK 237
H K
Sbjct: 171 QSDWKAHSK 179
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 31.1 bits (67), Expect = 0.75
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 347 SDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
++ +S RT ++ C +CN+ F R +L H +RH
Sbjct: 51 AEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRH 89
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAH +T G R C C R FSR + H+
Sbjct: 150 CSKGYAVQSDYKAHLKT-CGTRGHSC---DCGRVFSRVESFIEHQ 190
>At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 260
Score = 31.1 bits (67), Expect = 0.75
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 353 SRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
S + E + ++ ++ F C C R+F S L H H +E+
Sbjct: 67 SSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRER 111
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHK 324
C K Y S KAH++T G + +RC C FSR D H+
Sbjct: 163 CSKRYAVQSDWKAHSKT-CGTKEYRC---DCGTIFSRRDSYITHR 203
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 323 RTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
+T +F C VCN+ F R +L H + H
Sbjct: 74 KTIMATNRFLCEVCNKGFQREQNLQLHRRGH 104
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Frame = -2
Query: 428 LKAHARTHTGERPFRCAWPGC-----ERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMR 264
LK + + + C P C R + +H GEKK++C C++R+
Sbjct: 110 LKQKSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAV 169
Query: 263 SDHLAKHVK 237
H K
Sbjct: 170 QSDWKAHSK 178
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 371 GCERRFSRSDELSRHKR-THTGEKKFECRVCNRRFMRSDHLAKHV 240
GC R+F++ + L H R ++ + C +CN+ D L +H+
Sbjct: 10 GCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHL 54
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 308 EKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
EK+F+C C R F S L H H +E+
Sbjct: 52 EKRFKCHYCFRNFPTSQALGGHQNAHKRER 81
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 30.7 bits (66), Expect = 0.99
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -2
Query: 428 LKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLA 249
L+ H + G +PFRC CE+ F+ + H++ + G+ F C VC F L
Sbjct: 173 LQTHYKRKHGAKPFRCR-KKCEKTFAVRGDWRTHEK-NCGKLWF-C-VCGSDFKHKRSLK 228
Query: 248 KHVK 237
HV+
Sbjct: 229 DHVR 232
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 311 GEKKFECRVCNRRFMRSDHLAKHVKRHAKE 222
G +F C VCN+ F R +++ H+ H +
Sbjct: 97 GPTQFSCSVCNKTFNRFNNMQMHMWGHGSQ 126
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 30.7 bits (66), Expect = 0.99
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 317 HTGEKKFECRVCNRRFMRSDHLAKHVKRHAKE 222
H G +F C +C++ F R +++ H+ H E
Sbjct: 174 HVGPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/80 (26%), Positives = 32/80 (40%)
Frame = -2
Query: 458 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVCN 279
CGK++ L H R H + + + + R +L KR + +EC+VC
Sbjct: 48 CGKSFECYQALGGHQRIHRPIKE-KLSKQEFSEVYPRKSKLQ--KRPESSSSCYECKVCG 104
Query: 278 RRFMRSDHLAKHVKRHAKEK 219
+ F L H K H K
Sbjct: 105 KIFGCYRGLGGHTKLHRSTK 124
>At5g48890.1 68418.m06048 hypothetical protein
Length = 173
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -2
Query: 365 ERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
E S E ++ + + F C C+R+F S L H H KE+
Sbjct: 13 EEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKER 61
>At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 161
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 335 SRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEKA 216
S H +H + F C+ C R+F S L H H +E+A
Sbjct: 29 SAHPASH---RLFPCQYCPRKFYTSQALGGHQNAHKRERA 65
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 347 SDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
S+ ++ +T +F C +CN+ F R +L H + H
Sbjct: 47 SEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGH 85
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Frame = -2
Query: 461 GCGKNYFKSSH-LKAHARTHTGERPFRCAWPGCERRFS--RSDEL-------SRHKRTHT 312
G G Y K L+ T P C PGC+ R+ L + +KR H
Sbjct: 199 GHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKH- 257
Query: 311 GEKKFECRVCNRRFMRSDHLAKHVKRHAK 225
G K F CR+C + F H K K
Sbjct: 258 GSKPFACRMCGKAFAVKGDWRTHEKNCGK 286
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 305 KKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
K+ EC+ C + F S L H H KE+
Sbjct: 58 KRHECQYCGKEFANSQALGGHQNAHKKER 86
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 305 KKFECRVCNRRFMRSDHLAKHVKRH 231
+++EC++CNR F L H K H
Sbjct: 272 RQYECQICNRMFASGQALGGHKKIH 296
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 299 FECRVCNRRFMRSDHLAKHVKRHAKEK 219
FEC+ CNR+F L H H K K
Sbjct: 49 FECKTCNRKFDSFQALGGHRASHKKPK 75
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 368 CERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKE 222
C+R F L +H++ K F+C VC+++ + + HV + KE
Sbjct: 17 CDREFDDEKILVQHQKA----KHFKCHVCHKKLSTASGMVIHVLQVHKE 61
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 377 WPGCERR-FSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEKA 216
WP E R F+ ++E + + C C R F + L H+ H +++A
Sbjct: 28 WPFREERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRA 82
>At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein
(ZFP1) identical to zinc finger protein, ZFP1
gi|790673|gb|AAA87297; contains zinc finger, C2H2 type,
domain, Prosite:PS00028
Length = 228
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 353 SRSDELSRHKRTHTGEKK-FECRVCNRRFMRSDHLAKHVKRHAKEK 219
S S +H++ + + F C C R+F S L H H +E+
Sbjct: 49 SSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRER 94
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 323 RTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
+T +F C +CN+ F R +L H + H
Sbjct: 53 KTLMATNRFVCEICNKGFQRDQNLQLHRRGH 83
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 323 RTHTGEKKFECRVCNRRFMRSDHLAKHVKRH 231
+T +F C +CN+ F R +L H + H
Sbjct: 74 KTLLATNRFVCEICNKGFQRDQNLQLHRRGH 104
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 347 SDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHA 228
SDEL + K+ T EC +C + F L H + HA
Sbjct: 194 SDELKKKKKKSTSSHH-ECPICAKVFTSGQALGGHKRSHA 232
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Frame = -2
Query: 368 CERRFSRSDELS---RHKRTHTGE------KKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
CER S + + RH+RT + + +EC C R F + L H+ H +++
Sbjct: 3 CERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDR 61
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 308 EKKFECRVCNRRFMRSDHLAKHVKRH 231
EK EC +C F L H++RH
Sbjct: 189 EKTHECSICKAEFSSGQALGGHMRRH 214
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 547 GTRTAGAGLGASGTQPGVAAGDGAWGTR 630
G G G+GA G+ G AAG G G R
Sbjct: 550 GGANVGVGVGAGGSTGGGAAGGGGVGNR 577
>At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family
protein / snRNP family protein contains similarity to
U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo
sapiens] gi|2708307|gb|AAC51926
Length = 786
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -2
Query: 413 RTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKR 234
R T +R R G ER SR E H+R+H G K+ E R R+ ++ A+ K+
Sbjct: 58 RDRTKDRRGRSVERG-EREGSRDREKHHHERSHEGSKEKESR-SKRKDREEENGARDGKK 115
Query: 233 HAK 225
++
Sbjct: 116 KSR 118
>At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein
(ZFP7) identical to zinc finger protein, ZFP7
gi|790685|gb|AAA87303; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 209
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = -2
Query: 335 SRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEK 219
++ + + F C C R+F S L H H +E+
Sbjct: 47 TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRER 85
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 302 KFECRVCNRRFMRSDHLAKHVKRH 231
+F C +CN+ F R +L H + H
Sbjct: 5 RFFCEICNKGFQREQNLQLHKRGH 28
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 329 HKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEKA 216
+K+T T C +C F L H++RH EKA
Sbjct: 76 NKKTKTATSH-PCPICGVEFPMGQALGGHMRRHRSEKA 112
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 338 LSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKRHAKEKA 216
LS+ + T + F C+ CN+ F L H H + A
Sbjct: 21 LSKAHQNDTKSRVFACKTCNKEFPSFQALGGHRASHRRSAA 61
>At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 396
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 377 WPGCERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDHLAKHVKR-HAKEK 219
W ERR R+ + K T + C VC R+ + L KH K+ H +E+
Sbjct: 126 WVVEERRERRNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQLHERER 179
>At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 201
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 299 FECRVCNRRFMRSDHLAKHVKRHAKEK 219
++C+ C R+F ++ L H H KE+
Sbjct: 27 YKCKYCPRKFDKTQALGGHQNAHRKER 53
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 302 KFECRVCNRRFMRSDHLAKHVKRH 231
+F C VCN+ F R +L H + H
Sbjct: 67 RFICEVCNKGFKRDQNLQLHRRGH 90
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,199,786
Number of Sequences: 28952
Number of extensions: 171853
Number of successful extensions: 825
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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