BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d11f
(666 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle... 30 0.057
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 29 0.17
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 27 0.40
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 26 0.93
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 25 2.1
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 24 5.0
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 6.5
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 8.7
>EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle
protein protein.
Length = 178
Score = 30.3 bits (65), Expect = 0.057
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +1
Query: 190 AIPMRAGALASHDAAPGAVLQALGHHAGPQGRHLQSGASAAPARARHEHA 339
A+ A A A+H AAP A H+A P + + AAPA HA
Sbjct: 84 AVKYAAPAYAAHYAAPAVHYPAAAHYAAPAVHYPAAAHYAAPAVHYAAHA 133
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 28.7 bits (61), Expect = 0.17
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 2 RMSTLLEVCGPLSPPSTPPLMENKVELPLKKIAAKRA 112
R + LLEVC P S P P L+ ++LP I A+ A
Sbjct: 1082 RFALLLEVCAPGSVPD-PALITALLDLPQAPIVARAA 1117
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 27.5 bits (58), Expect = 0.40
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 254 PSVIMRAHKDGTCSPEPLPPPPAHGMN 334
PS A DG SP P PPPP ++
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLS 795
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 26.2 bits (55), Expect = 0.93
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 14 LLEVCGPLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSD 163
L+ G SPP++P + + V P A + SP AG P+P D
Sbjct: 1252 LMSAGGFASPPASPLVPDTAVPDPHSLYAIPN-KVKPSPLAGAAVPKPMD 1300
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 25.0 bits (52), Expect = 2.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 597 AGAGLGASGTQPGVAA 550
AG GL SGT+PG +A
Sbjct: 27 AGTGLNGSGTEPGWSA 42
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 71 YFPSTAALTAVRGVRKL 21
+F ST L+AVRGVR L
Sbjct: 416 FFISTVLLSAVRGVRYL 432
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 6.5
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 2 RMSTLLEVCGPLSPPST-PPLMENKVELPLKKIAAKRARESSSPPA 136
R S+ + GP + +T PP +++E P + +AA ++ PPA
Sbjct: 900 RSSSSQQHRGPGAAAATGPPPPTHRLEQPPQVVAAAPTQQQPLPPA 945
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 23.0 bits (47), Expect = 8.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 609 GTRTAGAGLGASGTQPGVAAGDGAW 535
G ++ G G+ S T ++GDG W
Sbjct: 915 GDQSPGGGMMVSDTINNNSSGDGRW 939
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,577
Number of Sequences: 2352
Number of extensions: 10459
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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