Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d11f
(666 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 26 0.28
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 24 1.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 4.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 4.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.0
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 6.0
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 6.0
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 26.2 bits (55), Expect = 0.28
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 41 PPSTPPLMENKVELPLKKIAAKRARESSS--PPAGL 142
PP TPP EN +++ L+ I + R +++ P AG+
Sbjct: 45 PPVTPPQGENMLDMDLRGIYSNRTDFTTTFRPTAGM 80
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
Frame = +2
Query: 293 SPEPLPPPPA-HGMN 334
SPEP PPPP H N
Sbjct: 1856 SPEPPPPPPRNHDQN 1870
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 318 GGGGRGSGLQVPSLWARMMT 259
G G G GLQ SLWA +T
Sbjct: 761 GRSGYGIGLQKGSLWADAVT 780
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 281 DGTCSPEPLPPPP 319
D P+P PPPP
Sbjct: 334 DSDTPPKPAPPPP 346
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 296 PEPLPPPPAHGMNML 340
P P PPPP+ G L
Sbjct: 1355 PPPPPPPPSSGQAYL 1369
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 473 VPSPHLECQPKQNTRDEQRVPQAPSPAAT 559
VP H + PKQ R + P+A S T
Sbjct: 276 VPGDHGDHAPKQTVRFKVHDPKAHSKGGT 304
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 324 CAGGGGRGSGLQVPSL 277
CAGGGGR S + SL
Sbjct: 9 CAGGGGRLSSVLSLSL 24
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 324 CAGGGGRGSGLQVPSL 277
CAGGGGR S + SL
Sbjct: 9 CAGGGGRLSSVLSLSL 24
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 324 CAGGGGRGSGLQVPSL 277
CAGGGGR S + SL
Sbjct: 9 CAGGGGRLSSVLSLSL 24
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 324 CAGGGGRGSGLQVPSL 277
CAGGGGR S + SL
Sbjct: 9 CAGGGGRLSSVLSLSL 24
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 299 EPLPPPP 319
EPLPPPP
Sbjct: 373 EPLPPPP 379
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/55 (21%), Positives = 23/55 (41%)
Frame = +1
Query: 178 RVQQAIPMRAGALASHDAAPGAVLQALGHHAGPQGRHLQSGASAAPARARHEHAQ 342
++Q A G++ +P V + H Q H+Q ++A+ +H Q
Sbjct: 142 KLQAAAVDHQGSVLDGPDSPPLVESQMHHQMHTQHPHMQPQQGQHQSQAQQQHLQ 196
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,418
Number of Sequences: 438
Number of extensions: 3041
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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