Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d08f
(378 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O60869 Cluster: Endothelial differentiation-related fac... 155 2e-37
UniRef50_Q6A207 Cluster: Multi bridging factor1 homologue; n=1; ... 133 9e-31
UniRef50_Q7YW76 Cluster: Endothelial differentiation-related fac... 116 1e-25
UniRef50_Q6BXQ8 Cluster: Multiprotein-bridging factor 1; n=2; Di... 112 2e-24
UniRef50_Q9SJI8 Cluster: Expressed protein; n=4; Magnoliophyta|R... 111 4e-24
UniRef50_O14467 Cluster: Multiprotein-bridging factor 1; n=12; E... 110 7e-24
UniRef50_Q8TG23 Cluster: Putative multi-protein-binding factor 1... 102 3e-21
UniRef50_Q8LE67 Cluster: Ethylene-responsive transcriptional coa... 93 2e-18
UniRef50_Q5CU92 Cluster: Multiprotein bridging factor type 1 lik... 81 5e-15
UniRef50_Q4UAU5 Cluster: Multiprotein bridging factor (Type 1), ... 81 9e-15
UniRef50_A4HQN1 Cluster: Putative transcription factor MBF 1; n=... 77 1e-13
UniRef50_A5K4U4 Cluster: Multiprotein bridging factor type 1, pu... 76 2e-13
UniRef50_A6S7S8 Cluster: Putative uncharacterized protein; n=2; ... 76 2e-13
UniRef50_P14327 Cluster: Vegetative-specific protein H7; n=4; Di... 75 4e-13
UniRef50_Q4QDK2 Cluster: Putative uncharacterized protein; n=6; ... 70 2e-11
UniRef50_A7K9E3 Cluster: Putative uncharacterized protein Z533L;... 69 4e-11
UniRef50_Q871W6 Cluster: Multiprotein-bridging factor 1; n=16; A... 68 5e-11
UniRef50_UPI000049A3A3 Cluster: Helix-turn-helix protein; n=1; E... 67 9e-11
UniRef50_UPI00006CE504 Cluster: Helix-turn-helix family protein;... 66 3e-10
UniRef50_Q2NF15 Cluster: Predicted transcriptional regulator; n=... 54 1e-06
UniRef50_Q8PY59 Cluster: Zinc finger protein; n=4; Methanosarcin... 48 8e-05
UniRef50_A5UK32 Cluster: Predicted transcription factor; n=1; Me... 48 8e-05
UniRef50_Q5V4J9 Cluster: HTH DNA-binding protein; n=5; Halobacte... 46 3e-04
UniRef50_A2DR49 Cluster: Helix-turn-helix family protein; n=1; T... 45 4e-04
UniRef50_Q6KZQ6 Cluster: HTH DNA binding protein; n=4; Thermopla... 45 5e-04
UniRef50_Q64BZ3 Cluster: Predicted transcription factor; n=2; en... 44 7e-04
UniRef50_A6T130 Cluster: Uncharacterized conserved protein; n=1;... 44 0.001
UniRef50_A5D4E1 Cluster: Putative uncharacterized protein; n=2; ... 43 0.002
UniRef50_Q8TY57 Cluster: Predicted transcription factor, homolog... 43 0.002
UniRef50_Q38Y87 Cluster: Putative DNA-binding protein, XRE famil... 42 0.005
UniRef50_A7IDH2 Cluster: Helix-turn-helix domain protein; n=1; X... 42 0.005
UniRef50_O26825 Cluster: Conserved protein; n=1; Methanothermoba... 41 0.007
UniRef50_Q73HP0 Cluster: Transcriptional regulator, putative; n=... 40 0.012
UniRef50_A0LPM5 Cluster: Transcriptional regulator of molybdate ... 40 0.012
UniRef50_A5N9B0 Cluster: Predicted phage transcriptional regulat... 40 0.015
UniRef50_Q980M2 Cluster: Multiprotein Bridging Factor (MBP-like)... 40 0.015
UniRef50_Q2FQ48 Cluster: Transcriptional regulator, XRE family; ... 40 0.015
UniRef50_A6TTI0 Cluster: Putative transcriptional regulator, XRE... 40 0.020
UniRef50_A2BLW5 Cluster: Conserved archaeal protein; n=1; Hypert... 40 0.020
UniRef50_A0B6C6 Cluster: Transcriptional regulator, XRE family; ... 40 0.020
UniRef50_Q047Y9 Cluster: Transcriptional regulator, xre family; ... 39 0.027
UniRef50_Q8SWK3 Cluster: Putative uncharacterized protein ECU01_... 39 0.027
UniRef50_Q88UW0 Cluster: Putative uncharacterized protein lp_234... 38 0.047
UniRef50_A5CZG2 Cluster: Hypothetical transcriptional regulator;... 38 0.047
UniRef50_Q74N97 Cluster: NEQ143; n=1; Nanoarchaeum equitans|Rep:... 38 0.047
UniRef50_Q0W256 Cluster: Putative transcription factor; n=1; unc... 38 0.062
UniRef50_UPI00015BB0A5 Cluster: transcriptional regulator, XRE f... 37 0.11
UniRef50_Q3DNV7 Cluster: Transcriptional regulator, Cro/CI famil... 37 0.11
UniRef50_A3H8F8 Cluster: Transcriptional regulator, XRE family; ... 37 0.11
UniRef50_Q9X8B2 Cluster: Putative DNA-binding protein; n=1; Stre... 37 0.14
UniRef50_A6LAD6 Cluster: Putative uncharacterized protein; n=2; ... 37 0.14
UniRef50_O28302 Cluster: Putative uncharacterized protein; n=1; ... 37 0.14
UniRef50_O30257 Cluster: Uncharacterized HTH-type transcriptiona... 37 0.14
UniRef50_A5KM56 Cluster: Putative uncharacterized protein; n=1; ... 36 0.19
UniRef50_A3VUS8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.19
UniRef50_A0Q3S9 Cluster: Transcriptional regulator, MerR family;... 36 0.19
UniRef50_Q3ER79 Cluster: Transcriptional regulator; n=2; Bacillu... 36 0.25
UniRef50_A6TK93 Cluster: Plasmid maintenance system antidote pro... 36 0.25
UniRef50_A6NZM6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.25
UniRef50_Q2Y8T7 Cluster: Transcriptional regulator, XRE family; ... 36 0.33
UniRef50_Q4UUY9 Cluster: Transcriptional regulator, HTH_3 family... 35 0.44
UniRef50_Q03IY6 Cluster: Transcriptional regulator, xre family; ... 35 0.44
UniRef50_Q039U4 Cluster: Transcriptional regulator, xre family; ... 35 0.44
UniRef50_A6P2G2 Cluster: Putative uncharacterized protein; n=1; ... 35 0.44
UniRef50_A6G6R0 Cluster: Transcriptional regulator; n=2; Plesioc... 35 0.44
UniRef50_Q52BY4 Cluster: Multiprotein-bridging factor 1; n=1; Ma... 35 0.44
UniRef50_UPI000045E701 Cluster: COG1396: Predicted transcription... 35 0.58
UniRef50_Q81S88 Cluster: DNA-binding protein; n=15; Bacillus|Rep... 35 0.58
UniRef50_O53463 Cluster: POSSIBLE TRANSCRIPTIONAL REGULATORY PRO... 35 0.58
UniRef50_Q41GJ6 Cluster: Helix-turn-helix motif; n=1; Exiguobact... 35 0.58
UniRef50_Q085U7 Cluster: Putative uncharacterized protein; n=1; ... 35 0.58
UniRef50_A7B1X5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.58
UniRef50_A5I039 Cluster: DNA-binding protein; n=6; Clostridium|R... 35 0.58
UniRef50_A0V350 Cluster: Plasmid maintenance system antidote pro... 35 0.58
UniRef50_Q8ZYG8 Cluster: Conserved helix-turn-helix protein; n=4... 35 0.58
UniRef50_Q5DUQ9 Cluster: Putative uncharacterized protein; n=1; ... 34 0.76
UniRef50_Q1FJM3 Cluster: Helix-turn-helix motif; n=1; Clostridiu... 34 0.76
UniRef50_A5TRU5 Cluster: MerR family transcriptional regulator; ... 34 0.76
UniRef50_A5N1F8 Cluster: Predicted transcriptional regulator; n=... 34 0.76
UniRef50_A3I0P0 Cluster: Putative uncharacterized protein; n=1; ... 34 0.76
UniRef50_A1BF09 Cluster: Helix-turn-helix domain protein; n=2; C... 34 0.76
UniRef50_A0YJB7 Cluster: Putative uncharacterized protein; n=1; ... 34 0.76
UniRef50_Q00US1 Cluster: Chromosome 15 contig 1, DNA sequence; n... 34 0.76
UniRef50_Q8Y3P3 Cluster: Lmo2792 protein; n=13; Listeria|Rep: Lm... 34 1.0
UniRef50_Q2B6Z1 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_Q18XJ5 Cluster: Transcriptional regulator, XRE family; ... 34 1.0
UniRef50_Q03I41 Cluster: Transcriptional regulator, xre family; ... 34 1.0
UniRef50_Q02WQ6 Cluster: Transcriptional regulator, xre family; ... 34 1.0
UniRef50_Q7QPV1 Cluster: GLP_433_12991_13314; n=1; Giardia lambl... 34 1.0
UniRef50_Q5QYA8 Cluster: Predicted transcriptional regulator, co... 33 1.3
UniRef50_Q2RSF5 Cluster: Transcriptional Regulator, XRE family; ... 33 1.3
UniRef50_Q2RLW5 Cluster: Transcriptional regulator, XRE family; ... 33 1.3
UniRef50_O69902 Cluster: Putative transcriptional regulator; n=1... 33 1.3
UniRef50_Q3Y0J1 Cluster: Helix-turn-helix motif; n=1; Enterococc... 33 1.3
UniRef50_Q11WW9 Cluster: Transcriptional regulator; n=2; Bactero... 33 1.3
UniRef50_Q08UC5 Cluster: Putative transcriptional repressor; n=2... 33 1.3
UniRef50_A7HQ26 Cluster: Helix-turn-helix domain protein; n=1; P... 33 1.3
UniRef50_A7FXB8 Cluster: DNA-binding protein; n=2; Clostridium b... 33 1.3
UniRef50_A6DY12 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_A6CG08 Cluster: Transcriptional regulator, XRE family p... 33 1.3
UniRef50_A4NX31 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_A3I6C0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_Q54K09 Cluster: G-protein-coupled receptor (GPCR) famil... 33 1.3
UniRef50_A3H5L3 Cluster: Transcriptional regulator, XRE family; ... 33 1.3
UniRef50_A2SSN6 Cluster: Helix-turn-helix domain protein; n=1; M... 33 1.3
UniRef50_Q81TU5 Cluster: DNA-binding protein; n=14; Bacillus cer... 33 1.8
UniRef50_Q733K6 Cluster: Helix-turn-helix domain protein; n=6; B... 33 1.8
UniRef50_Q0HYT8 Cluster: Transcriptional regulator, XRE family; ... 33 1.8
UniRef50_A3Y8G1 Cluster: Transcriptional regulator, putative; n=... 33 1.8
UniRef50_A0NKA2 Cluster: Transcriptional regulator, helix-turn-h... 33 1.8
UniRef50_Q82Z07 Cluster: Zinc-binding transcriptional regulator,... 33 2.3
UniRef50_Q7NYR0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.3
UniRef50_Q392E3 Cluster: Transcriptional regulator, XRE family; ... 33 2.3
UniRef50_Q46240 Cluster: NanH gene & ORF1,2,3 & 4; n=2; Clostrid... 33 2.3
UniRef50_Q41GZ0 Cluster: Helix-turn-helix motif; n=1; Exiguobact... 33 2.3
UniRef50_Q3ETE5 Cluster: Transcriptional regulator, MerR family;... 33 2.3
UniRef50_Q212H0 Cluster: Transcriptional regulator, XRE family; ... 33 2.3
UniRef50_Q0LS22 Cluster: Helix-turn-helix type 3; n=1; Caulobact... 33 2.3
UniRef50_A4MJV9 Cluster: Transcriptional regulator, XRE family; ... 33 2.3
UniRef50_A7SWI9 Cluster: Predicted protein; n=1; Nematostella ve... 33 2.3
UniRef50_Q747E3 Cluster: Transcriptional regulator, Cro/CI famil... 32 3.1
UniRef50_Q3YQT0 Cluster: Transcriptional regulator; n=9; canis g... 32 3.1
UniRef50_Q18WP6 Cluster: Transcriptional regulator, XRE family; ... 32 3.1
UniRef50_Q03G62 Cluster: Putative uncharacterized protein; n=1; ... 32 3.1
UniRef50_A0QLC0 Cluster: Transcriptional regulatory protein; n=1... 32 3.1
UniRef50_A1RY29 Cluster: Helix-turn-helix domain protein; n=1; T... 32 3.1
UniRef50_Q5ZSF5 Cluster: Phage repressor; n=5; Legionella pneumo... 32 4.1
UniRef50_Q2RGY9 Cluster: Transcriptional regulator, XRE family w... 32 4.1
UniRef50_Q68VM1 Cluster: BzdR; n=1; Azoarcus sp. CIB|Rep: BzdR -... 32 4.1
UniRef50_Q4AJJ7 Cluster: Helix-turn-helix motif; n=1; Chlorobium... 32 4.1
UniRef50_Q24R89 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_Q1D7T5 Cluster: Conserved domain protein; n=2; Cystobac... 32 4.1
UniRef50_Q184G8 Cluster: Putative uncharacterized protein; n=2; ... 32 4.1
UniRef50_A7D9D6 Cluster: Shikimate kinase; n=3; Alphaproteobacte... 32 4.1
UniRef50_A6NW39 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_A6GA55 Cluster: Transcriptional regulator, XRE family p... 32 4.1
UniRef50_A4YW73 Cluster: Putative HTH-type transcriptional regul... 32 4.1
UniRef50_A4BMI1 Cluster: Transcriptional regulator, XRE family p... 32 4.1
UniRef50_A3W916 Cluster: Probable transcriptional regulator; n=3... 32 4.1
UniRef50_A1IGF9 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_A1HTM8 Cluster: Transcriptional regulator, XRE family; ... 32 4.1
UniRef50_UPI00005100D5 Cluster: COG1396: Predicted transcription... 31 5.4
UniRef50_Q5WCS3 Cluster: Transcriptional regulator; n=1; Bacillu... 31 5.4
UniRef50_Q5FQ46 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_Q30ZR3 Cluster: Transcriptional regulator, XRE family; ... 31 5.4
UniRef50_Q4J1C7 Cluster: Helix-turn-helix motif; n=15; Pseudomon... 31 5.4
UniRef50_Q0I2C4 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_A7HXN4 Cluster: SH3 type 3 domain protein; n=1; Parviba... 31 5.4
UniRef50_A6PMA5 Cluster: Putative uncharacterized protein precur... 31 5.4
UniRef50_A5KNK7 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_A4F7C1 Cluster: Putative DNA-binding protein; n=2; Sacc... 31 5.4
UniRef50_A1SKA3 Cluster: Helix-turn-helix domain protein; n=1; N... 31 5.4
UniRef50_A0THR7 Cluster: Transcriptional regulator, XRE family; ... 31 5.4
UniRef50_A0NHQ3 Cluster: Transcriptional regulator, helix-turn-h... 31 5.4
UniRef50_Q7S7B9 Cluster: Putative uncharacterized protein NCU012... 31 5.4
UniRef50_Q6MW32 Cluster: Related to muscle-derived protein; n=23... 31 5.4
UniRef50_UPI00015B8E96 Cluster: UPI00015B8E96 related cluster; n... 31 7.1
UniRef50_Q9X153 Cluster: LacI family transcriptional regulator, ... 31 7.1
UniRef50_Q9RN15 Cluster: PXO2-17; n=4; Bacillus cereus group|Rep... 31 7.1
UniRef50_Q9KBW0 Cluster: BH1814 protein; n=1; Bacillus haloduran... 31 7.1
UniRef50_Q9F2J9 Cluster: Putative regulatory protein; n=2; Strep... 31 7.1
UniRef50_Q5WC17 Cluster: Transcriptional regulator; n=1; Bacillu... 31 7.1
UniRef50_Q2IJ13 Cluster: Transcriptional regulator, XRE family; ... 31 7.1
UniRef50_Q4CA00 Cluster: Helix-turn-helix motif; n=3; Bacteria|R... 31 7.1
UniRef50_A7MGV6 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_A6T9S4 Cluster: Putative regulator; n=3; Enterobacteria... 31 7.1
UniRef50_A6NZ97 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_A5MYI9 Cluster: Predicted transcriptional regulator wit... 31 7.1
UniRef50_A5I3V7 Cluster: Putative DNA-binding protein; n=3; Clos... 31 7.1
UniRef50_A4EMV4 Cluster: Putative transcriptional regulator; n=1... 31 7.1
UniRef50_A3DFN6 Cluster: Transcriptional regulator, XRE family; ... 31 7.1
UniRef50_A3CPI8 Cluster: Transcriptional regulator, XRE family, ... 31 7.1
UniRef50_A1R204 Cluster: Putative helix-turn-helix domain protei... 31 7.1
UniRef50_A0ZBZ7 Cluster: Transcriptional Regulator of molybdate ... 31 7.1
UniRef50_Q9YAC8 Cluster: Putative HTH-type transcriptional regul... 31 7.1
UniRef50_Q58006 Cluster: Uncharacterized HTH-type transcriptiona... 31 7.1
UniRef50_Q6MSW2 Cluster: Hypothetical transmembrane protein; n=1... 31 9.4
UniRef50_Q63A79 Cluster: Possible transcriptional regulator/TPR ... 31 9.4
UniRef50_Q5Z3T1 Cluster: Putative DNA-binding protein; n=1; Noca... 31 9.4
UniRef50_Q4JVR7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_Q2RLS7 Cluster: Transcriptional regulator, XRE family; ... 31 9.4
UniRef50_Q2RI10 Cluster: Transcriptional regulator, XRE family; ... 31 9.4
UniRef50_Q2BF28 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_Q184B4 Cluster: Putative phage DNA-binding protein; n=1... 31 9.4
UniRef50_Q039Z5 Cluster: Transcriptional regulator, xre family; ... 31 9.4
UniRef50_A6AXT1 Cluster: HTH-type transcriptional regulator PuuR... 31 9.4
UniRef50_A5VKC5 Cluster: Transcriptional regulator, XRE family; ... 31 9.4
UniRef50_A6N3H0 Cluster: XRE transcription regulator; n=2; uncla... 31 9.4
UniRef50_A2FKP9 Cluster: CAMK family protein kinase; n=1; Tricho... 31 9.4
UniRef50_A0DEA8 Cluster: Chromosome undetermined scaffold_479, w... 31 9.4
UniRef50_Q12UR4 Cluster: Transcriptional regulator, XRE family; ... 31 9.4
UniRef50_P44030 Cluster: Uncharacterized HTH-type transcriptiona... 31 9.4
>UniRef50_O60869 Cluster: Endothelial differentiation-related factor
1; n=52; Eukaryota|Rep: Endothelial
differentiation-related factor 1 - Homo sapiens (Human)
Length = 148
Score = 155 bits (377), Expect = 2e-37
Identities = 71/103 (68%), Positives = 89/103 (86%)
Frame = +2
Query: 8 AARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKG 187
AA+R+G V+T +K+ AG NKQH TKNTAKLDRETEEL H+++ L++GK+I QGRQ+KG
Sbjct: 30 AAQRRGEDVETSKKWAAGQNKQHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKG 89
Query: 188 MSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
++QKDLATKI EKPQ++ DYE+GR IPNN VLGKIERAIG+KL
Sbjct: 90 LTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKL 132
>UniRef50_Q6A207 Cluster: Multi bridging factor1 homologue; n=1;
Oikopleura dioica|Rep: Multi bridging factor1 homologue
- Oikopleura dioica (Tunicate)
Length = 144
Score = 133 bits (322), Expect = 9e-31
Identities = 66/102 (64%), Positives = 83/102 (81%)
Frame = +2
Query: 11 ARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGM 190
A+R G ++T+QK AGTN + T + AKLDRETEEL+H+ + +D+GKLI +GR KGM
Sbjct: 29 AQRSG-NLETRQKMFAGTNAKG-NTAHHAKLDRETEELKHKTLGMDVGKLIQKGRNQKGM 86
Query: 191 SQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+QK+LATKICEKPQI+N+YE G+ IPNN VLGKIERAIGIKL
Sbjct: 87 TQKELATKICEKPQIINEYELGKSIPNNQVLGKIERAIGIKL 128
>UniRef50_Q7YW76 Cluster: Endothelial differentiation-related factor
1; n=1; Schistosoma japonicum|Rep: Endothelial
differentiation-related factor 1 - Schistosoma japonicum
(Blood fluke)
Length = 134
Score = 116 bits (279), Expect = 1e-25
Identities = 48/104 (46%), Positives = 78/104 (75%)
Frame = +2
Query: 5 NAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAK 184
+AA+R+G ++T +++ AG NKQ KNTAKL+ +TE+L ++ + +D+GK+IMQ RQ K
Sbjct: 16 SAAQRRGDHIETHKRWAAGQNKQRTIEKNTAKLEEDTEDLHNDLVDMDVGKIIMQARQEK 75
Query: 185 GMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
++QKDLATKI + +++ DYE GR + N ++ K+E+A+G+KL
Sbjct: 76 NLTQKDLATKITKSNKVIADYEQGRAVKNQAIISKLEKALGVKL 119
>UniRef50_Q6BXQ8 Cluster: Multiprotein-bridging factor 1; n=2;
Dikarya|Rep: Multiprotein-bridging factor 1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 150
Score = 112 bits (270), Expect = 2e-24
Identities = 52/105 (49%), Positives = 74/105 (70%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
+NAARR G V T++KYG+ K + + KLD + + +K+ +++GK I Q RQ
Sbjct: 32 LNAARRSGNVVGTEKKYGSTNTKSNPEGQRLTKLDAVDDVVPTKKLDMNVGKAIQQARQE 91
Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
K ++QKDLATKI EKP ++NDYEAGR +PN +LGK+ERA+G+KL
Sbjct: 92 KKLTQKDLATKINEKPNVINDYEAGRAVPNQQLLGKLERALGVKL 136
>UniRef50_Q9SJI8 Cluster: Expressed protein; n=4; Magnoliophyta|Rep:
Expressed protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 142
Score = 111 bits (267), Expect = 4e-24
Identities = 54/107 (50%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNK--QHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGR 175
VNAARR G ++T +K+ AGTNK T+ NT LD +TE L HE++P +L K IMQ R
Sbjct: 32 VNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQAR 91
Query: 176 QAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
K ++Q LA I EKPQ++ +YE+G+ IPN +L K+ERA+G KL
Sbjct: 92 TDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSKLERALGAKL 138
>UniRef50_O14467 Cluster: Multiprotein-bridging factor 1; n=12;
Eukaryota|Rep: Multiprotein-bridging factor 1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 151
Score = 110 bits (265), Expect = 7e-24
Identities = 53/105 (50%), Positives = 73/105 (69%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
+NAARRQG+ V +KYG+ + + K+DRET+ ++ +K+ ++G+ I + R
Sbjct: 32 INAARRQGLVVSVDKKYGSTNTRGDNEGQRLTKVDRETDIVKPKKLDPNVGRAISRARTD 91
Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
K MSQKDLATKI EKP +VNDYEA R IPN VL K+ERA+G+KL
Sbjct: 92 KKMSQKDLATKINEKPTVVNDYEAARAIPNQQVLSKLERALGVKL 136
>UniRef50_Q8TG23 Cluster: Putative multi-protein-binding factor 1;
n=1; Yarrowia lipolytica|Rep: Putative
multi-protein-binding factor 1 - Yarrowia lipolytica
(Candida lipolytica)
Length = 152
Score = 102 bits (244), Expect = 3e-21
Identities = 48/105 (45%), Positives = 68/105 (64%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
+NAA R G + T +KY + +K + K+DR + + K+ +GK I++GR
Sbjct: 33 INAAMRSGNVLSTDKKYASANSKDGGDGQRLTKIDRSDDIIAPPKVEASVGKAIIKGRSE 92
Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
KG++QK+LA KI EKPQ+VNDYE+GR PN VL K+ER +GIKL
Sbjct: 93 KGLTQKELAVKINEKPQVVNDYESGRAQPNQQVLSKMERVLGIKL 137
>UniRef50_Q8LE67 Cluster: Ethylene-responsive transcriptional
coactivator, putative; n=9; Magnoliophyta|Rep:
Ethylene-responsive transcriptional coactivator,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 148
Score = 92.7 bits (220), Expect = 2e-18
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNKQHVTTK----NTAKLDRETEELRHEKIPLDLGKLIMQ 169
VNAA R G+ V T +K+ AG+NK+ +T NT KL+ ETE +++ ++ +I +
Sbjct: 34 VNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLMIQK 93
Query: 170 GRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
R K MSQ DLA +I E+ Q+V +YE G+ +PN VL K+E+ +G+KL
Sbjct: 94 ARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKL 142
>UniRef50_Q5CU92 Cluster: Multiprotein bridging factor type 1 like
transcriptional co-activator; n=4; Apicomplexa|Rep:
Multiprotein bridging factor type 1 like transcriptional
co-activator - Cryptosporidium parvum Iowa II
Length = 158
Score = 81.4 bits (192), Expect = 5e-15
Identities = 42/108 (38%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTN---KQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQG 172
+N ARR+G + T++K+ G N KQ++ +N AKLD +T + R ++ + + + Q
Sbjct: 37 LNQARRKGEEIITEKKFLGGRNASTKQNIP-QNAAKLDEDTGDYRIFRVSGEFSRALQQA 95
Query: 173 RQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
R AK ++Q LA I EK +VNDYE+G+ IPN I++ K+ R +G+ L
Sbjct: 96 RVAKKLTQAQLAQMINEKASVVNDYESGKAIPNPILVQKMSRCLGVNL 143
>UniRef50_Q4UAU5 Cluster: Multiprotein bridging factor (Type 1),
putative; n=5; Aconoidasida|Rep: Multiprotein bridging
factor (Type 1), putative - Theileria annulata
Length = 145
Score = 80.6 bits (190), Expect = 9e-15
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNK--QHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGR 175
+N ARR G+ +DTQ+K+ G NK + N AK++ E E E++ + + R
Sbjct: 26 LNKARRAGVELDTQKKFLGGQNKTTKSFLPPNAAKIENENESFHIERVSFAFRTALQKAR 85
Query: 176 QAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
AK M+Q LA I E ++ +YE G GIPN V+ K+ R +G+KL
Sbjct: 86 MAKNMTQIQLARAINENETLIKEYENGSGIPNGQVIQKLNRVLGVKL 132
>UniRef50_A4HQN1 Cluster: Putative transcription factor MBF 1; n=1;
Nidula niveotomentosa|Rep: Putative transcription factor
MBF 1 - Nidula niveotomentosa
Length = 167
Score = 76.6 bits (180), Expect = 1e-13
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNKQHVTT--KNTAKLDRETEELRHEKIPLDLGKLIMQGR 175
+NAARR G V T +K AG NK H T + AKLDRE E K+ +G+ I R
Sbjct: 72 LNAARRTGAVVATDKKITAGGNKAHQGTDHQRIAKLDRENEVAPPPKVAPSVGRAIQAAR 131
Query: 176 QAKGMSQKDLATKICEKPQIVNDYEAGRGIP 268
+SQKDLA KI EKP ++ +YE+G+ +P
Sbjct: 132 MELKLSQKDLAQKINEKPTVLQEYESGKAVP 162
>UniRef50_A5K4U4 Cluster: Multiprotein bridging factor type 1,
putative; n=2; Plasmodium|Rep: Multiprotein bridging
factor type 1, putative - Plasmodium vivax
Length = 136
Score = 76.2 bits (179), Expect = 2e-13
Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNKQ---HVTTKNTAKLDRETEELRHEKIPLDLGKLIMQG 172
+ AR+ GI V+ ++K+ G NK ++ +N AK+++ETE + +++ + + Q
Sbjct: 23 IGEARKLGIDVEVEKKFLGGKNKSCKGNLIIENKAKIEQETENFKIDRVTPVFSRALQQA 82
Query: 173 RQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
R K ++Q LA + E ++ +YE G+ IPNN+++ K+ R +GI L
Sbjct: 83 RINKKLTQSQLARLVNESESVIKEYENGKAIPNNVIIQKLNRVLGINL 130
>UniRef50_A6S7S8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 208
Score = 76.2 bits (179), Expect = 2e-13
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
+NAA+R G + T++KY +G ++ K+DR E ++ + + +++ + I GR+A
Sbjct: 32 LNAAKRSGGAITTEKKYASGNAGSSGEGQHLTKVDRSDEIIKPKTVGMEVARAIQDGRKA 91
Query: 182 KGM-SQKDLATKICE-KPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
K + +Q DLA K+C P+IVND E G G P+ VL +ER +G+KL
Sbjct: 92 KNIKTQADLA-KLCNTTPKIVNDMERGVGTPDQKVLNNMERVLGVKL 137
>UniRef50_P14327 Cluster: Vegetative-specific protein H7; n=4;
Dictyostelium discoideum|Rep: Vegetative-specific
protein H7 - Dictyostelium discoideum (Slime mold)
Length = 104
Score = 74.9 bits (176), Expect = 4e-13
Identities = 37/95 (38%), Positives = 59/95 (62%)
Frame = +2
Query: 32 VDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLAT 211
+D Q KYGAG NK + N K+ E++ ++ + + I + R A M+QK+LA
Sbjct: 1 MDVQTKYGAGQNKV-LGGANQKKIAESEEDIALPELNPSVPQAIQRARNALKMTQKELAF 59
Query: 212 KICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
KI E+P ++N+YE+G IP+ VL K+E+A+ +KL
Sbjct: 60 KINERPGVINEYESGSAIPSQAVLSKLEKALNVKL 94
>UniRef50_Q4QDK2 Cluster: Putative uncharacterized protein; n=6;
Trypanosomatidae|Rep: Putative uncharacterized protein -
Leishmania major
Length = 163
Score = 69.7 bits (163), Expect = 2e-11
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 NAARRQGIPVDTQQKYGAGTNKQHVTT-KNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
N A + G V Q+K N+Q V+ N KLD + E L+ +K+ L IM+ RQA
Sbjct: 39 NRAMQSGQNVQVQRKEHQRFNQQTVSAGANAKKLDEDNETLKVKKVDPHLRVRIMKERQA 98
Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
SQ+DLA +I E+ +V +YE+G+ + V+ K+E+A+G+ L
Sbjct: 99 LNWSQQDLAQRISERVSVVAEYESGKAVQEERVIVKMEKALGVHL 143
>UniRef50_A7K9E3 Cluster: Putative uncharacterized protein Z533L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z533L - Chlorella virus ATCV-1
Length = 127
Score = 68.5 bits (160), Expect = 4e-11
Identities = 32/85 (37%), Positives = 52/85 (61%)
Frame = +2
Query: 62 TNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVN 241
T K+ TT N AK++R+T + + + L + I+ R AK M++ LA KI EKP+++
Sbjct: 39 TVKKTTTTTNMAKIERDTTDAAPKTVSTKLAQAIISARTAKKMTRDQLAVKINEKPKVIE 98
Query: 242 DYEAGRGIPNNIVLGKIERAIGIKL 316
YE + +P+ VL K+ RA+G+ L
Sbjct: 99 LYETKKAVPDPAVLSKMSRALGVSL 123
>UniRef50_Q871W6 Cluster: Multiprotein-bridging factor 1; n=16;
Ascomycota|Rep: Multiprotein-bridging factor 1 -
Neurospora crassa
Length = 160
Score = 68.1 bits (159), Expect = 5e-11
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGT--NKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGR 175
+NAA+R G + T++KY AG +K V + +DR + ++ + + ++G I + R
Sbjct: 33 LNAAQRSGNIIATEKKYAAGNTASKPGVEGQRLTMVDRSDDIVKPKTVSKEVGAAIQKAR 92
Query: 176 QA-----KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
A K M+QK+LAT+ I+ YE G G+P+ +LG +ER + +KL
Sbjct: 93 SAIMIGDKAMTQKELATRCNSTQAIIAQYERGEGVPDQKLLGNLERVLNVKL 144
>UniRef50_UPI000049A3A3 Cluster: Helix-turn-helix protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Helix-turn-helix
protein - Entamoeba histolytica HM-1:IMSS
Length = 125
Score = 67.3 bits (157), Expect = 9e-11
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +2
Query: 98 KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNI 277
K D L H+++ + I + RQ K ++QK+LA KI EKPQ + DYE+G+ IP+
Sbjct: 49 KADEGETPLVHKQVSHKVSLEIQRARQEKHLTQKELAQKINEKPQTIADYESGKAIPSQQ 108
Query: 278 VLGKIERAIGIKL 316
VL K+ER +G+KL
Sbjct: 109 VLAKLERILGVKL 121
>UniRef50_UPI00006CE504 Cluster: Helix-turn-helix family protein;
n=1; Tetrahymena thermophila SB210|Rep: Helix-turn-helix
family protein - Tetrahymena thermophila SB210
Length = 132
Score = 65.7 bits (153), Expect = 3e-10
Identities = 36/102 (35%), Positives = 57/102 (55%)
Frame = +2
Query: 11 ARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGM 190
A QG+ V+ +K N ++ + AK+ E +E + + + D + Q RQAKG
Sbjct: 26 ALHQGLAVEHVKK-NVTNNPSNLDGRYVAKVLNE-DEYKVDTVSHDFRIALQQARQAKGW 83
Query: 191 SQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+Q+ LA CEK +++DYE+GR IP+ + K E A+G KL
Sbjct: 84 TQEQLAKACCEKKSVISDYESGRAIPHPSTITKFESALGCKL 125
>UniRef50_Q2NF15 Cluster: Predicted transcriptional regulator; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Predicted
transcriptional regulator - Methanosphaera stadtmanae
(strain DSM 3091)
Length = 164
Score = 53.6 bits (123), Expect = 1e-06
Identities = 26/84 (30%), Positives = 48/84 (57%)
Frame = +2
Query: 65 NKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVND 244
N Q+ T + R+++E +E + D K I Q R+ K ++ K L KI E+ ++ +
Sbjct: 51 NNQNRRTNSNRPYTRKSKEEEYELVD-DYEKTIKQAREKKNLTHKQLGEKIYERESVIAN 109
Query: 245 YEAGRGIPNNIVLGKIERAIGIKL 316
E G+ +P+N + K+E+A+ IK+
Sbjct: 110 IETGKMVPDNKIAHKLEKALHIKI 133
>UniRef50_Q8PY59 Cluster: Zinc finger protein; n=4;
Methanosarcinaceae|Rep: Zinc finger protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 161
Score = 47.6 bits (108), Expect = 8e-05
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +2
Query: 23 GIPVDTQQKYGAGTNKQHVTTKNTAKLDRETE-ELRHEKIPLDLGKLIMQGRQAKGMSQK 199
G PVD + + T T K ++ ++ +++ D +I + R+A+G SQ+
Sbjct: 34 GKPVDKRSPVSRKVSPVVRTVPRTEKRPKKDFFDILKDELLDDYDHIIREAREARGWSQE 93
Query: 200 DLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
DLA I EK ++ E +P + V K+E A+ IKL
Sbjct: 94 DLAENIKEKASLIKKIERSEIVPEDSVRKKLEHALNIKL 132
>UniRef50_A5UK32 Cluster: Predicted transcription factor; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Predicted
transcription factor - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 160
Score = 47.6 bits (108), Expect = 8e-05
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +2
Query: 68 KQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDY 247
K++ TTK D EEL D I + R++K +S+++L KI EK ++N
Sbjct: 52 KKNKTTKQNYSKDEPKEELVE-----DFNVKIRKARESKNLSREELGQKIYEKVSVINRI 106
Query: 248 EAGRGIPNNIVLGKIERAIGIKL 316
E+G+ IP+ + K+E A+ I L
Sbjct: 107 ESGKMIPDIRLTKKLENALNITL 129
>UniRef50_Q5V4J9 Cluster: HTH DNA-binding protein; n=5;
Halobacteriaceae|Rep: HTH DNA-binding protein -
Haloarcula marismortui (Halobacterium marismortui)
Length = 175
Score = 45.6 bits (103), Expect = 3e-04
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+++ D I +GR+++G+SQ++LA ++ EK ++ E G +P++ V K+E A+ I
Sbjct: 84 DEVAQDYDDRIRKGRESQGLSQEELAKQLNEKASLIRKLEQGNSLPSDDVQKKLESALEI 143
Query: 311 KL 316
L
Sbjct: 144 SL 145
>UniRef50_A2DR49 Cluster: Helix-turn-helix family protein; n=1;
Trichomonas vaginalis G3|Rep: Helix-turn-helix family
protein - Trichomonas vaginalis G3
Length = 112
Score = 45.2 bits (102), Expect = 4e-04
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +2
Query: 53 GAGTNKQHVTT--KNTAKLDRETEEL--RHEKIPLDLGKLIMQGRQAKGMSQKDLATKIC 220
GAG K+HV + K A ++ + + +K+ +++ I R AK +QKDLA
Sbjct: 21 GAG-QKKHVDSHAKKFAMIENDNDHFGDHRQKVGIEMANKIKNLRNAKEWTQKDLALHAG 79
Query: 221 EKPQIVNDYEAGRGIPNNIVLGKIERAI 304
K +V DYE+G PN ++ + E+ +
Sbjct: 80 VKIDVVKDYESGNAEPNAKIIKRFEQVL 107
>UniRef50_Q6KZQ6 Cluster: HTH DNA binding protein; n=4;
Thermoplasmatales|Rep: HTH DNA binding protein -
Picrophilus torridus
Length = 146
Score = 44.8 bits (101), Expect = 5e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
D LI R+ M+Q+DLA K+ E+ ++++ E G +P+ K+E+ +GIKL
Sbjct: 85 DYASLIKSARERLSMTQEDLARKVLERKNVISNIERGDLLPSIETAKKLEKVLGIKL 141
>UniRef50_Q64BZ3 Cluster: Predicted transcription factor; n=2;
environmental samples|Rep: Predicted transcription
factor - uncultured archaeon GZfos26E7
Length = 147
Score = 44.4 bits (100), Expect = 7e-04
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +2
Query: 47 KYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEK 226
K AG +T + ++ + + +++ D G I + R+A+GMSQ++LA I EK
Sbjct: 53 KVSAGRVPAGITFRTGSRRRPDMFDQMTDELLSDYGFAIRRAREARGMSQEELALAIKEK 112
Query: 227 PQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
++ E P + V K+ER +GI L
Sbjct: 113 ASLLKKLEREDLRPEDSVRKKLERVLGISL 142
>UniRef50_A6T130 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 109
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +2
Query: 134 KIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
K+ + LG + Q R+A+G SQ+ LA K V + E G+ IP+ I L K+ A+G+K
Sbjct: 23 KLCVSLGLAVRQLREAQGWSQEALAEKAQLNRSYVGEVERGKTIPSLITLDKLASALGLK 82
Query: 314 L 316
+
Sbjct: 83 V 83
>UniRef50_A5D4E1 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Pelotomaculum thermopropionicum SI
Length = 355
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/56 (32%), Positives = 36/56 (64%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+G+ + R+A G+S ++LA ++ PQ ++ YE G IP++ VL ++ A+G+ +
Sbjct: 2 VGERLRLARRAAGLSLRELANRVGVSPQAISKYERGLDIPSSGVLLRLAEALGVNV 57
>UniRef50_Q8TY57 Cluster: Predicted transcription factor, homolog of
eukaryotic MBF1; n=1; Methanopyrus kandleri|Rep:
Predicted transcription factor, homolog of eukaryotic
MBF1 - Methanopyrus kandleri
Length = 171
Score = 42.7 bits (96), Expect = 0.002
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
E +P D + + + R+ +G SQ+DLA KI EK ++ E+G+ P+ + K+ER + I
Sbjct: 81 EVVP-DYDERVREARERRGWSQEDLAKKIGEKVSVIRRIESGKMEPDVELARKLERVLEI 139
Query: 311 KL 316
+L
Sbjct: 140 EL 141
>UniRef50_Q38Y87 Cluster: Putative DNA-binding protein, XRE family;
n=1; Lactobacillus sakei subsp. sakei 23K|Rep: Putative
DNA-binding protein, XRE family - Lactobacillus sakei
subsp. sakei (strain 23K)
Length = 284
Score = 41.5 bits (93), Expect = 0.005
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKI 292
LG+ I R+A+ +SQK LA IC +P +++ E G IPN I+L KI
Sbjct: 11 LGQRIALERRAQHLSQKQLAADICSQP-MISQIEKGTYIPNAILLAKI 57
>UniRef50_A7IDH2 Cluster: Helix-turn-helix domain protein; n=1;
Xanthobacter autotrophicus Py2|Rep: Helix-turn-helix
domain protein - Xanthobacter sp. (strain Py2)
Length = 425
Score = 41.5 bits (93), Expect = 0.005
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNI-VLGKIERAIGIK 313
+L ++++Q R A GMSQ DLA K+ KPQ V YEA + ++ L +I +A+G+K
Sbjct: 75 ELPRVLVQARIASGMSQTDLAEKLRMKPQQVQRYEATDYMGASLGRLIEISKALGVK 131
>UniRef50_O26825 Cluster: Conserved protein; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Conserved protein - Methanobacterium thermoautotrophicum
Length = 155
Score = 41.1 bits (92), Expect = 0.007
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
D G++I R+ + S++DLA +I EK ++N E+ R P+ + K+ER + IKL
Sbjct: 68 DYGRIIRTEREKRDWSREDLAERINEKVSVINRIESERMEPDIKLARKLERLLKIKL 124
>UniRef50_Q73HP0 Cluster: Transcriptional regulator, putative; n=14;
Wolbachia|Rep: Transcriptional regulator, putative -
Wolbachia pipientis wMel
Length = 312
Score = 40.3 bits (90), Expect = 0.012
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 74 HVTTKNTA-KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 250
HV ++ T+ +D + + IP +G+ I + R +G +Q+DLA+K+ Q + +YE
Sbjct: 144 HVISQTTSLSIDEYDNDEKKISIPYKVGQRIKEWRLRRGYTQEDLASKVGIINQRIYEYE 203
Query: 251 AGRGIPNNIVLGKIERAIGIKL 316
GR + +L +I + + I +
Sbjct: 204 QGRAAVSLEMLNEIAKVLLINI 225
Score = 33.5 bits (73), Expect = 1.3
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG 256
+G+ + R AKG +QKDLA KI Q++ YE G
Sbjct: 16 IGQEVRNRRLAKGYTQKDLAKKIDTTYQVILQYEKG 51
>UniRef50_A0LPM5 Cluster: Transcriptional regulator of molybdate
metabolism, XRE family; n=2; Deltaproteobacteria|Rep:
Transcriptional regulator of molybdate metabolism, XRE
family - Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB)
Length = 374
Score = 40.3 bits (90), Expect = 0.012
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2
Query: 161 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+ R+A+G+SQ +LA ++ K Q + D E+GR +PN + I R +G ++
Sbjct: 14 LKSARKARGLSQSELAGRVGVKRQAIYDMESGRYLPNTALALYIARELGCRV 65
>UniRef50_A5N9B0 Cluster: Predicted phage transcriptional regulator;
n=1; Clostridium kluyveri DSM 555|Rep: Predicted phage
transcriptional regulator - Clostridium kluyveri DSM 555
Length = 268
Score = 39.9 bits (89), Expect = 0.015
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+++G+ I + R KG++QK+LA I P + +YE R P+ L KI + +G+ +
Sbjct: 1 MNIGENIKRIRTQKGLTQKELAKSIHVTPTTIQNYENNRRKPSVDTLDKIAKVLGVTI 58
>UniRef50_Q980M2 Cluster: Multiprotein Bridging Factor (MBP-like),
putative; n=5; Sulfolobaceae|Rep: Multiprotein Bridging
Factor (MBP-like), putative - Sulfolobus solfataricus
Length = 165
Score = 39.9 bits (89), Expect = 0.015
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = +2
Query: 83 TKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRG 262
T+ A L E +I D K+I R+ G+SQ+ LA K+ IV +E+G+
Sbjct: 56 TRKKATLKPPKMENAELEIVTDYYKIIKTAREQLGISQQQLAQKLKVSENIVKRFESGKL 115
Query: 263 IPNNIVLGKIERAIGIKL 316
P ++E+ +GIKL
Sbjct: 116 KPTISQARQLEKILGIKL 133
>UniRef50_Q2FQ48 Cluster: Transcriptional regulator, XRE family;
n=3; Methanomicrobiales|Rep: Transcriptional regulator,
XRE family - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 172
Score = 39.9 bits (89), Expect = 0.015
Identities = 27/99 (27%), Positives = 42/99 (42%)
Frame = +2
Query: 20 QGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQK 199
QG T T+ +T+ + R+ + + D I R GM+QK
Sbjct: 43 QGAVPRTSAAQAVRTSAYSGSTRPQVQRSRDLFDRMGGDLVEDYADRIRDARMKLGMTQK 102
Query: 200 DLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
DLA + E+ +V E G IP + V K+E+ + I L
Sbjct: 103 DLALAMMERELLVKKLEKGELIPEDEVRKKLEKILNISL 141
>UniRef50_A6TTI0 Cluster: Putative transcriptional regulator, XRE
family; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Putative transcriptional regulator, XRE family -
Alkaliphilus metalliredigens QYMF
Length = 89
Score = 39.5 bits (88), Expect = 0.020
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +2
Query: 98 KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNI 277
++ RE ++L K+ + K I+Q R A+G+SQK+LA K+ K ++ E G P+
Sbjct: 15 EVKREYDDL---KVLYAIKKEIIQLRLAQGLSQKELAEKVGTKQSAISRLEGGEYNPSIE 71
Query: 278 VLGKIERAIG 307
L K+ A+G
Sbjct: 72 FLSKVAHALG 81
>UniRef50_A2BLW5 Cluster: Conserved archaeal protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Conserved archaeal
protein - Hyperthermus butylicus (strain DSM 5456 / JCM
9403)
Length = 200
Score = 39.5 bits (88), Expect = 0.020
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +2
Query: 125 RHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
R+E + D + I + RQ G++Q++LA K+ ++ EAG +P + ++ER +
Sbjct: 105 RYEVVE-DYAERIRRARQRLGLTQRELAQKVRVGENVIKRIEAGTLVPPIDLARRLERVL 163
Query: 305 GIKL 316
G+KL
Sbjct: 164 GVKL 167
>UniRef50_A0B6C6 Cluster: Transcriptional regulator, XRE family;
n=1; Methanosaeta thermophila PT|Rep: Transcriptional
regulator, XRE family - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 165
Score = 39.5 bits (88), Expect = 0.020
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
E +P D G +I R++ +S +DLA +I EK ++ E +P + V K+E+ + I
Sbjct: 76 EVVP-DYGNIIKNARESMNLSLEDLALRIKEKASLLRKIEREELVPEDDVRKKLEKELKI 134
Query: 311 KL 316
KL
Sbjct: 135 KL 136
>UniRef50_Q047Y9 Cluster: Transcriptional regulator, xre family;
n=2; Lactobacillus delbrueckii subsp. bulgaricus|Rep:
Transcriptional regulator, xre family - Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC BAA-365)
Length = 119
Score = 39.1 bits (87), Expect = 0.027
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+GK + R+ +GMSQ++LA + Q ++++E GR +P + KI G+
Sbjct: 6 IGKYLRDLRRRRGMSQQELALALGVSKQTISNWEVGRKVPRMKAVDKIANIFGV 59
>UniRef50_Q8SWK3 Cluster: Putative uncharacterized protein
ECU01_0955; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU01_0955 - Encephalitozoon
cuniculi
Length = 95
Score = 39.1 bits (87), Expect = 0.027
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
+G I R KGMS+KDLA K+ + I++ +E G + N + + E + +K
Sbjct: 37 VGDAIANARAQKGMSRKDLAQKMKKNVSIIDSWERGEAVYNEKIAKEFESILEVK 91
>UniRef50_Q88UW0 Cluster: Putative uncharacterized protein lp_2342;
n=1; Lactobacillus plantarum|Rep: Putative
uncharacterized protein lp_2342 - Lactobacillus
plantarum
Length = 298
Score = 38.3 bits (85), Expect = 0.047
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
LG+ + Q R+ KGMSQK+LA IC + I + E IP+ ++ KI +GI+L
Sbjct: 4 LGEKVRQFRKRKGMSQKELADGICTQATI-SLIEKKSKIPSMKIMMKICNRLGIRL 58
>UniRef50_A5CZG2 Cluster: Hypothetical transcriptional regulator;
n=1; Pelotomaculum thermopropionicum SI|Rep:
Hypothetical transcriptional regulator - Pelotomaculum
thermopropionicum SI
Length = 97
Score = 38.3 bits (85), Expect = 0.047
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 125 RHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
R LDL I++ R+ KGM+QKD+A K Q+V+ E+ +PN L KI A+
Sbjct: 29 RQASAELDLIAQIIKTRKEKGMTQKDVADKAGLTQQMVSRIESREHLPNYRNLVKIADAL 88
Query: 305 GIKL 316
K+
Sbjct: 89 DSKI 92
>UniRef50_Q74N97 Cluster: NEQ143; n=1; Nanoarchaeum equitans|Rep:
NEQ143 - Nanoarchaeum equitans
Length = 148
Score = 38.3 bits (85), Expect = 0.047
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
E +P + +LI + R+ KG++Q DLA + ++ E+G P+ + KIE+ +GI
Sbjct: 61 EFVP-NFNELIKKAREEKGLTQSDLAKLLHTDINTISKIESGDYYPSEKLAKKIEKLLGI 119
Query: 311 KL 316
K+
Sbjct: 120 KI 121
>UniRef50_Q0W256 Cluster: Putative transcription factor; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
transcription factor - Uncultured methanogenic archaeon
RC-I
Length = 166
Score = 37.9 bits (84), Expect = 0.062
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +2
Query: 116 EELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIE 295
++++ E + GK I R+A+ M+ ++LA K K I+ E G P + ++ K+E
Sbjct: 69 DKIKDELVEDYAGK-IKSAREARHMTDEELAAKTGTKVNIIRKVERGELAPEDALVKKLE 127
Query: 296 RAIGIKL 316
R + IKL
Sbjct: 128 RELDIKL 134
>UniRef50_UPI00015BB0A5 Cluster: transcriptional regulator, XRE
family; n=1; Ignicoccus hospitalis KIN4/I|Rep:
transcriptional regulator, XRE family - Ignicoccus
hospitalis KIN4/I
Length = 157
Score = 37.1 bits (82), Expect = 0.11
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
D + + + R+ G+S+++L K+ E ++ E GR P+ + K+ER +G++L
Sbjct: 70 DYAERVRKARERLGLSRRELGMKVGEHETVIKRIELGRLEPDLELARKLERVLGVEL 126
>UniRef50_Q3DNV7 Cluster: Transcriptional regulator, Cro/CI family;
n=1; Streptococcus agalactiae 515|Rep: Transcriptional
regulator, Cro/CI family - Streptococcus agalactiae 515
Length = 117
Score = 37.1 bits (82), Expect = 0.11
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 173 RQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
R+ KG+SQK+LA KI PQ +++ E +G P L KI R +
Sbjct: 13 RKQKGLSQKELAKKIGMLPQTISNIENQKGYPTFSNLDKIARYFNV 58
>UniRef50_A3H8F8 Cluster: Transcriptional regulator, XRE family;
n=1; Caldivirga maquilingensis IC-167|Rep:
Transcriptional regulator, XRE family - Caldivirga
maquilingensis IC-167
Length = 182
Score = 37.1 bits (82), Expect = 0.11
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +2
Query: 68 KQHVTTKNTAKLDRETEELRHEKIPL--DLGKLIMQGRQAKGMSQKDLATKICEKPQIVN 241
++++T K E + E++ + + G++I R GMS+ LA+ + K +
Sbjct: 63 QRYITPVRQVKRRNEVNVNQAERLEVIDNYGEVIKDARSRLGMSRDVLASMLGIKESTLR 122
Query: 242 DYEAGRGIPNNIVLGKIERAIGIKL 316
+ E G+ IP+ + K+E+ +GIKL
Sbjct: 123 NIEDGKLIPDINLARKMEKVLGIKL 147
>UniRef50_Q9X8B2 Cluster: Putative DNA-binding protein; n=1;
Streptomyces coelicolor|Rep: Putative DNA-binding
protein - Streptomyces coelicolor
Length = 390
Score = 36.7 bits (81), Expect = 0.14
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
G + Q R+ G ++K+LATKI P V YEAG P + ++ A+G+
Sbjct: 19 GARLTQARRLAGWTKKELATKINVTPAAVGQYEAGAIRPRPEQVRRLAEALGM 71
>UniRef50_A6LAD6 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 120
Score = 36.7 bits (81), Expect = 0.14
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+ +LI + KGMSQK LA +I P VNDY +GR P + + R + I
Sbjct: 59 VAELIELSLEEKGMSQKQLAGEIGISPSRVNDYISGRSEPTLKIARLLCRVLNI 112
>UniRef50_O28302 Cluster: Putative uncharacterized protein; n=1;
Archaeoglobus fulgidus|Rep: Putative uncharacterized
protein - Archaeoglobus fulgidus
Length = 159
Score = 36.7 bits (81), Expect = 0.14
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 158 LIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+I + R+ +G SQ+ LA KI EK ++ E P V+ K+E+ IKL
Sbjct: 77 IIRREREKRGWSQEQLAKKIQEKESLIKKIENAEITPEPEVVEKLEKLFNIKL 129
>UniRef50_O30257 Cluster: Uncharacterized HTH-type transcriptional
regulator AF_2414; n=1; Archaeoglobus fulgidus|Rep:
Uncharacterized HTH-type transcriptional regulator
AF_2414 - Archaeoglobus fulgidus
Length = 229
Score = 36.7 bits (81), Expect = 0.14
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
G+ + + R SQ DLA K+ P +++DYE+GR P L K A+
Sbjct: 21 GEALRKWRSIFNASQSDLARKLGISPSVISDYESGRRKPGTAFLKKFVCAL 71
>UniRef50_A5KM56 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 429
Score = 36.3 bits (80), Expect = 0.19
Identities = 15/53 (28%), Positives = 35/53 (66%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
G+ I + R+ +GM+QK++A + + V+ +E +G+P+ +L ++ +A+G+
Sbjct: 48 GEFIARKRKERGMTQKEMAELLGVTNKAVSKWETSQGMPDIGILPELGKALGV 100
>UniRef50_A3VUS8 Cluster: Putative uncharacterized protein; n=1;
Parvularcula bermudensis HTCC2503|Rep: Putative
uncharacterized protein - Parvularcula bermudensis
HTCC2503
Length = 486
Score = 36.3 bits (80), Expect = 0.19
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIV-LGKIERAIGIKL 316
+L +++ R A G++Q+DLA ++ KPQ + YEA R ++ L +I +A+G+++
Sbjct: 79 ELADGLIKARIASGLTQQDLAERVGLKPQQIQRYEAERYAGASLTRLIEIVKALGVRI 136
>UniRef50_A0Q3S9 Cluster: Transcriptional regulator, MerR family;
n=1; Clostridium novyi NT|Rep: Transcriptional
regulator, MerR family - Clostridium novyi (strain NT)
Length = 147
Score = 36.3 bits (80), Expect = 0.19
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+++G+ I + R+ KG++Q +LA K + YE G P VL KI A+GI
Sbjct: 1 MNVGENIRKYRKEKGLTQSELAEKTHLATNTIQRYEKGHRQPTMQVLEKIADALGI 56
>UniRef50_Q3ER79 Cluster: Transcriptional regulator; n=2; Bacillus
cereus group|Rep: Transcriptional regulator - Bacillus
thuringiensis serovar israelensis ATCC 35646
Length = 143
Score = 35.9 bits (79), Expect = 0.25
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
G + + R+ KG SQ+ LATKI Q V+ +E G+ PN V+ + GI +
Sbjct: 4 GDKLKKEREKKGWSQEYLATKIHVSRQSVSKWETGKNYPNIGVIIDLSDLFGITI 58
>UniRef50_A6TK93 Cluster: Plasmid maintenance system antidote
protein, XRE family; n=1; Alkaliphilus metalliredigens
QYMF|Rep: Plasmid maintenance system antidote protein,
XRE family - Alkaliphilus metalliredigens QYMF
Length = 254
Score = 35.9 bits (79), Expect = 0.25
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +2
Query: 68 KQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDY 247
+Q + ++ A + E++ I ++GK I R+ M + LA I KPQ + DY
Sbjct: 88 EQDLVAESEASYFHQVEDIVRYNI--EIGKNITHVREDAKMDVEQLAAAINIKPQALKDY 145
Query: 248 EAGRGIPNNIVLGKIERAIGI 310
E+G+ + + V+ +I + + +
Sbjct: 146 ESGKKVIPSYVIHRICKELSV 166
>UniRef50_A6NZM6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 296
Score = 35.9 bits (79), Expect = 0.25
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+ K I R+AKGMSQ+++A K+ Q V+ +E G +P+ VL ++ + + +
Sbjct: 4 IDKNIKHFRKAKGMSQEEMAVKLNVVRQTVSKWENGLSVPDADVLIRMAELLNVSV 59
>UniRef50_Q2Y8T7 Cluster: Transcriptional regulator, XRE family;
n=1; Nitrosospira multiformis ATCC 25196|Rep:
Transcriptional regulator, XRE family - Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849)
Length = 189
Score = 35.5 bits (78), Expect = 0.33
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
+D+ ++I +GR+ ++Q +LA + PQ V +E+G P L KI +
Sbjct: 6 MDIARIIREGREKLKLNQSELAELVGVSPQAVQQWESGATQPRGKRLNKIAEVL 59
>UniRef50_Q4UUY9 Cluster: Transcriptional regulator, HTH_3 family;
n=3; Proteobacteria|Rep: Transcriptional regulator,
HTH_3 family - Xanthomonas campestris pv. campestris
(strain 8004)
Length = 412
Score = 35.1 bits (77), Expect = 0.44
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 113 TEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKI 292
T +H I + + R+ +GM +++LA KI + V++YEAG P + L K+
Sbjct: 14 TSSEKHNGIVMFNPLRLTLARKRRGMKKRELAEKIGLTEKSVSNYEAGSQEPESTTLSKL 73
Query: 293 ERAI 304
A+
Sbjct: 74 SEAL 77
>UniRef50_Q03IY6 Cluster: Transcriptional regulator, xre family;
n=8; Streptococcus|Rep: Transcriptional regulator, xre
family - Streptococcus thermophilus (strain ATCC BAA-491
/ LMD-9)
Length = 289
Score = 35.1 bits (77), Expect = 0.44
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
L I R+ MSQK+LA IC++ QI + E G IP +++L ++ R + + +
Sbjct: 5 LASRIKNRRKELKMSQKELAEGICKQGQI-SRLENGEYIPGSVLLHELSRKLNVSM 59
>UniRef50_Q039U4 Cluster: Transcriptional regulator, xre family;
n=1; Lactobacillus casei ATCC 334|Rep: Transcriptional
regulator, xre family - Lactobacillus casei (strain ATCC
334)
Length = 185
Score = 35.1 bits (77), Expect = 0.44
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
G+ + Q R+ KG+SQ DLA I Q ++ YE G P+ + K+ +G+
Sbjct: 3 GERLTQLRKQKGLSQNDLAEAIGISRQAISKYENGLAEPDLDKIAKLRDILGV 55
>UniRef50_A6P2G2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 297
Score = 35.1 bits (77), Expect = 0.44
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
G+LI R+ KGM+QK+LA K+ + V+ +E G P +L + A+G
Sbjct: 7 GQLIRDLRKEKGMTQKELADKLHITDRAVSKWERGLCAPEISLLEPLAEALG 58
>UniRef50_A6G6R0 Cluster: Transcriptional regulator; n=2;
Plesiocystis pacifica SIR-1|Rep: Transcriptional
regulator - Plesiocystis pacifica SIR-1
Length = 113
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 119 ELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIER 298
EL HE +LG + + R+ G+SQ+ LA K + + E G G P+ + K+
Sbjct: 11 ELTHE----ELGDRVRERRRELGLSQEKLAEKAQVSKETIGRLEQGGGTPSLFTVRKVAN 66
Query: 299 AIG 307
A+G
Sbjct: 67 ALG 69
>UniRef50_Q52BY4 Cluster: Multiprotein-bridging factor 1; n=1;
Magnaporthe grisea|Rep: Multiprotein-bridging factor 1 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 161
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 VNAARRQGIPVDTQQKYGAGTNKQHVTTKN--TAKLDRETEELRHEKIPLDLGKLIMQGR 175
+NAA+R G V T++KYG + + K+DR + ++ + +LG IMQ R
Sbjct: 34 LNAAQRAGGIVGTEKKYGTANSSRSEAGSGQFLTKVDRSDDIVKPKTGDKELGMYIMQNR 93
Query: 176 QAKGMSQK 199
+ K + +
Sbjct: 94 EQKKLGNR 101
>UniRef50_UPI000045E701 Cluster: COG1396: Predicted transcriptional
regulators; n=1; Rickettsia rickettsii|Rep: COG1396:
Predicted transcriptional regulators - Rickettsia
rickettsii
Length = 92
Score = 34.7 bits (76), Expect = 0.58
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 134 KIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
K+ ++ +++ R A M+Q D+A K+ + E+G IPN + L K +A+ K
Sbjct: 25 KMEFEIASTLIKVRLASNMTQADVAKKMSNSQAQIARMESGHHIPNFLSLQKYTKAVNQK 84
Query: 314 L 316
+
Sbjct: 85 I 85
>UniRef50_Q81S88 Cluster: DNA-binding protein; n=15; Bacillus|Rep:
DNA-binding protein - Bacillus anthracis
Length = 181
Score = 34.7 bits (76), Expect = 0.58
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+D+GK I Q R+ KG++ K+LA P +++ E G P+ L + +A+ +
Sbjct: 4 IDIGKKIEQQRKEKGLTSKELAKMADITPSMLSQIERGSANPSIQTLKVLAKALDV 59
>UniRef50_O53463 Cluster: POSSIBLE TRANSCRIPTIONAL REGULATORY
PROTEIN; n=8; Mycobacterium tuberculosis complex|Rep:
POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN -
Mycobacterium tuberculosis
Length = 346
Score = 34.7 bits (76), Expect = 0.58
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
LG ++ R+A+G++Q +LA + +N YE+G P+ ++ K+ +G+
Sbjct: 4 LGDVLAVARKARGLTQIELAELVGLTQPAINRYESGDRDPDQHIVAKLAEILGV 57
>UniRef50_Q41GJ6 Cluster: Helix-turn-helix motif; n=1;
Exiguobacterium sibiricum 255-15|Rep: Helix-turn-helix
motif - Exiguobacterium sibiricum 255-15
Length = 139
Score = 34.7 bits (76), Expect = 0.58
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
LGK IMQ R+ +QK LA + E ++ YE G+ +PN L ++ A+
Sbjct: 5 LGKKIMQLRKQHQYTQKHLAERCGETVTSISAYERGQRMPNTQTLERLALAL 56
>UniRef50_Q085U7 Cluster: Putative uncharacterized protein; n=1;
Shewanella frigidimarina NCIMB 400|Rep: Putative
uncharacterized protein - Shewanella frigidimarina
(strain NCIMB 400)
Length = 325
Score = 34.7 bits (76), Expect = 0.58
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +2
Query: 98 KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 250
+++++ E+ K + G ++ R+AKG+S + +AT++ +P+I+ND E
Sbjct: 6 EVEQDAEKAPLLKDVVTAGAILKAAREAKGLSLETVATQLHLRPKIINDLE 56
>UniRef50_A7B1X5 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 387
Score = 34.7 bits (76), Expect = 0.58
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +2
Query: 89 NTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIP 268
+T K ++ + R + L +GK I R+ KG++Q+ +A + V+ +E P
Sbjct: 8 DTIKAAKDQRKERCRWMELKIGKRIQDLRKQKGLTQEQVAAALNISAAAVSKWETDTTYP 67
Query: 269 NNIVLGKIERAIGIKL 316
+ +L + R +G+ +
Sbjct: 68 DITILNPLARLLGVSV 83
>UniRef50_A5I039 Cluster: DNA-binding protein; n=6; Clostridium|Rep:
DNA-binding protein - Clostridium botulinum A str. ATCC
3502
Length = 373
Score = 34.7 bits (76), Expect = 0.58
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
L++GK I+ R+ KG++Q+ LA I V+ +E+G P+ ++L ++ I +
Sbjct: 4 LNIGKCIIHKRKEKGITQEQLANYIGVSKASVSKWESGSSYPDIVLLPELATYFNISV 61
>UniRef50_A0V350 Cluster: Plasmid maintenance system antidote
protein, XRE family; n=2; Clostridium|Rep: Plasmid
maintenance system antidote protein, XRE family -
Clostridium cellulolyticum H10
Length = 233
Score = 34.7 bits (76), Expect = 0.58
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+G+ I + R KGM+ K LA + + V D E+G+ I ++ ++G++ +A+ +L
Sbjct: 7 IGQEINKLRLKKGMTPKQLARALGVSEKFVLDIESGKKIVSDDMIGRVSKALDFEL 62
>UniRef50_Q8ZYG8 Cluster: Conserved helix-turn-helix protein; n=4;
Pyrobaculum|Rep: Conserved helix-turn-helix protein -
Pyrobaculum aerophilum
Length = 161
Score = 34.7 bits (76), Expect = 0.58
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +2
Query: 158 LIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+I + R+ G+S++ LA + K ++ EAG+ P+ + K+E+A+GI+L
Sbjct: 75 IIKRARENLGLSRETLAAMLGVKETVLRRIEAGQLQPDFSLAKKLEKALGIRL 127
>UniRef50_Q5DUQ9 Cluster: Putative uncharacterized protein; n=1;
Bacillus mycoides|Rep: Putative uncharacterized protein
- Bacillus mycoides
Length = 240
Score = 34.3 bits (75), Expect = 0.76
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPN 271
+D+GK I R M+Q+D+A+++ Q+++ +E G+ +P+
Sbjct: 20 MDIGKKIKHLRLINNMTQEDVASQLFISRQVISKWELGKSLPD 62
>UniRef50_Q1FJM3 Cluster: Helix-turn-helix motif; n=1; Clostridium
phytofermentans ISDg|Rep: Helix-turn-helix motif -
Clostridium phytofermentans ISDg
Length = 163
Score = 34.3 bits (75), Expect = 0.76
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+GK I R+ +G++Q+ LA + + ++ +E G+G+P+ L + +GI
Sbjct: 6 IGKFIADRRKVRGLTQQQLADDLGLTNKAISKWETGQGMPDITTLPILAEMLGI 59
>UniRef50_A5TRU5 Cluster: MerR family transcriptional regulator;
n=3; Fusobacterium nucleatum|Rep: MerR family
transcriptional regulator - Fusobacterium nucleatum
subsp. polymorphum ATCC 10953
Length = 184
Score = 34.3 bits (75), Expect = 0.76
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+ +G+ + + R KGMS ++LATK+ ++ E G+ P+ L KI + +++
Sbjct: 1 MTIGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRV 58
>UniRef50_A5N1F8 Cluster: Predicted transcriptional regulator; n=1;
Clostridium kluyveri DSM 555|Rep: Predicted
transcriptional regulator - Clostridium kluyveri DSM 555
Length = 162
Score = 34.3 bits (75), Expect = 0.76
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
+ +G+ I R+ ++Q+ LA KI + ++V YE+ P+ +L KIE A+ IK
Sbjct: 1 MTIGESIKYYRKNNKLTQETLANKINKSLRMVQKYESDEVTPSIEILNKIEDALCIK 57
>UniRef50_A3I0P0 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 289
Score = 34.3 bits (75), Expect = 0.76
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
+LGK I + R+AKG++Q++L + + EAG P + + + A+GI+
Sbjct: 33 ELGKKISEMRKAKGLTQEELVEMCNLNVRTIQRIEAGEVTPRSYTVKTLFEALGIR 88
>UniRef50_A1BF09 Cluster: Helix-turn-helix domain protein; n=2;
Chlorobium|Rep: Helix-turn-helix domain protein -
Chlorobium phaeobacteroides (strain DSM 266)
Length = 155
Score = 34.3 bits (75), Expect = 0.76
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 161 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
I++ +AK +SQK+LA KI PQ VN GR + K+E A+ I L
Sbjct: 45 ILRTLRAKNVSQKELAEKIGVSPQQVNKIVKGRENLTLETISKLEGALDIVL 96
>UniRef50_A0YJB7 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 92
Score = 34.3 bits (75), Expect = 0.76
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +2
Query: 158 LIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
LI+ R+ G+SQ+ LAT++ Q VN +E GR P+++ L I++ +
Sbjct: 15 LILTLRKRLGLSQEKLATQLGVSFQTVNRWERGRTQPSHLALQAIKQKL 63
>UniRef50_Q00US1 Cluster: Chromosome 15 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 15 contig 1, DNA
sequence - Ostreococcus tauri
Length = 255
Score = 34.3 bits (75), Expect = 0.76
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -1
Query: 312 FIPIALSIFPRTMLFGMPRPAS*SFTICGFSQILVARSF*LIPLACLPCIISF 154
F P S P+ FG+ P S S TICGFS I A + A PC ++F
Sbjct: 28 FTPRMRSSLPKICWFGIALPDSYSCTICGFSLICCASCACVSFFARRPCRMAF 80
>UniRef50_Q8Y3P3 Cluster: Lmo2792 protein; n=13; Listeria|Rep:
Lmo2792 protein - Listeria monocytogenes
Length = 252
Score = 33.9 bits (74), Expect = 1.0
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 71 QHVTTKNTAKLDRETEELRH--EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVND 244
Q T KN A E E + H E LGK I R K SQ DLA K P I+
Sbjct: 167 QFETLKNKAL---ENEGIAHYLESFSASLGKYIFSKRMEKKWSQLDLALKSDLSPVIIGR 223
Query: 245 YEAGRGIPNNIVLGKIERAIGIK 313
EAG + K+ +G+K
Sbjct: 224 LEAGDPDLTLRMYQKVCTVLGVK 246
>UniRef50_Q2B6Z1 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
protein - Bacillus sp. NRRL B-14911
Length = 299
Score = 33.9 bits (74), Expect = 1.0
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+LGK I R ++G+ Q +L+ IC + QI + E G IP + L I R +G+ +
Sbjct: 7 NLGKKIKDLRVSRGLKQSELSEGICTQAQI-SKIERGDIIPLSSTLYLIARRLGVDI 62
>UniRef50_Q18XJ5 Cluster: Transcriptional regulator, XRE family;
n=2; Desulfitobacterium hafniense|Rep: Transcriptional
regulator, XRE family - Desulfitobacterium hafniense
(strain DCB-2)
Length = 361
Score = 33.9 bits (74), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
LD+GK+I R+ K +Q+ LA + V+ +E G P+ +L I RA+
Sbjct: 3 LDMGKVITAKRKEKSWTQEQLAQAVGVSTPAVSKWETGATYPDITLLPPIARAL 56
>UniRef50_Q03I41 Cluster: Transcriptional regulator, xre family;
n=1; Pediococcus pentosaceus ATCC 25745|Rep:
Transcriptional regulator, xre family - Pediococcus
pentosaceus (strain ATCC 25745 / 183-1w)
Length = 190
Score = 33.9 bits (74), Expect = 1.0
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+ +G + + RQA+ ++Q+++AT++ Q ++ +E G+ +PN L + + + L
Sbjct: 1 MSIGTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSL 58
>UniRef50_Q02WQ6 Cluster: Transcriptional regulator, xre family;
n=2; Lactococcus lactis subsp. cremoris|Rep:
Transcriptional regulator, xre family - Lactococcus
lactis subsp. cremoris (strain SK11)
Length = 175
Score = 33.9 bits (74), Expect = 1.0
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+G I + R+ K ++Q+ LA + K +++YE G IP L ++ A+G+ +
Sbjct: 10 VGMKIKEFRKNKKLTQQGLADLVGVKNSAISNYEQGTRIPKRDFLFRVANALGVSI 65
>UniRef50_Q7QPV1 Cluster: GLP_433_12991_13314; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_433_12991_13314 - Giardia lamblia
ATCC 50803
Length = 107
Score = 33.9 bits (74), Expect = 1.0
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +2
Query: 62 TNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVN 241
TN + T D + I ++ + + + R AKGM++K LA K +
Sbjct: 16 TNNANKKPAGTYDKDPGDNAFGPKAIEFEVRRNLERARAAKGMNRKQLADAAYIKESQLA 75
Query: 242 DYEAGRGIPNNIVLGKIERAIGIKL 316
+E+G + V+ K+E+ +G KL
Sbjct: 76 AWESGSAPIPDAVIPKLEKVLGTKL 100
>UniRef50_Q5QYA8 Cluster: Predicted transcriptional regulator,
contains N-terminal xre-type HTH domain; n=1; Idiomarina
loihiensis|Rep: Predicted transcriptional regulator,
contains N-terminal xre-type HTH domain - Idiomarina
loihiensis
Length = 365
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/61 (24%), Positives = 36/61 (59%)
Frame = +2
Query: 71 QHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 250
++ +T++ K + E + +K G+++ + R+AKG+ Q+++A ++ + QI+ E
Sbjct: 4 ENESTQDNKKPESEAAQETEQKPSKGPGEILREAREAKGLEQREVADQLRLRKQIIELLE 63
Query: 251 A 253
A
Sbjct: 64 A 64
>UniRef50_Q2RSF5 Cluster: Transcriptional Regulator, XRE family;
n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Transcriptional Regulator, XRE family - Rhodospirillum
rubrum (strain ATCC 11170 / NCIB 8255)
Length = 196
Score = 33.5 bits (73), Expect = 1.3
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+++GK I + R+ +GMSQ LA + + YE GR P ++ + R + +
Sbjct: 2 IEIGKRIAEARKDQGMSQYALAKLLGVNQSTIAYYERGRNTPKPWIVEDLARILNV 57
>UniRef50_Q2RLW5 Cluster: Transcriptional regulator, XRE family;
n=1; Moorella thermoacetica ATCC 39073|Rep:
Transcriptional regulator, XRE family - Moorella
thermoacetica (strain ATCC 39073)
Length = 115
Score = 33.5 bits (73), Expect = 1.3
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKI-CEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
L G+ + + RQ KG+ Q+D+A + E+P + N +E G P L ++ R G+ L
Sbjct: 2 LRFGESLKELRQRKGLRQEDVARMVGVERPTVAN-WERGTKQPGLETLVRLSRLFGVSL 59
>UniRef50_O69902 Cluster: Putative transcriptional regulator; n=1;
Streptomyces coelicolor|Rep: Putative transcriptional
regulator - Streptomyces coelicolor
Length = 63
Score = 33.5 bits (73), Expect = 1.3
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
G+ + + R +GMSQ +A ++ V+ +E GR PN + + + RA+G +L
Sbjct: 4 GRKLKEARNKRGMSQAAVAARMGLSGLYVSYWENGRYAPNGVNMVLLLRALGCEL 58
>UniRef50_Q3Y0J1 Cluster: Helix-turn-helix motif; n=1; Enterococcus
faecium DO|Rep: Helix-turn-helix motif - Enterococcus
faecium DO
Length = 111
Score = 33.5 bits (73), Expect = 1.3
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 155 KLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
K+I + R+A G +QK+LA KI Q V +E PN L + RA+G
Sbjct: 8 KVIREKRKALGWTQKELAKKIFSTQQAVARWENSVTEPNLDSLTALSRALG 58
>UniRef50_Q11WW9 Cluster: Transcriptional regulator; n=2;
Bacteroidetes|Rep: Transcriptional regulator - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 79
Score = 33.5 bits (73), Expect = 1.3
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+++ +G +++ R+ KG SQ DLA + Q + E+G+ P L +I A+G+
Sbjct: 12 QEVQKRIGLRVIELREHKGWSQSDLARACNKDRQAIEKIESGKVNPTIFSLYEIAIALGV 71
Query: 311 KL 316
L
Sbjct: 72 SL 73
>UniRef50_Q08UC5 Cluster: Putative transcriptional repressor; n=2;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
transcriptional repressor - Stigmatella aurantiaca
DW4/3-1
Length = 172
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 119 ELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPN 271
E+R ++P+ L + Q R+ GM+Q + A I P++ E G +P+
Sbjct: 47 EIRQRRLPVTLSAALKQARKRAGMTQAEAAEGIGIAPEVYGRMERGGVLPS 97
>UniRef50_A7HQ26 Cluster: Helix-turn-helix domain protein; n=1;
Parvibaculum lavamentivorans DS-1|Rep: Helix-turn-helix
domain protein - Parvibaculum lavamentivorans DS-1
Length = 422
Score = 33.5 bits (73), Expect = 1.3
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 95 AKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGR 259
AK D + +R +K D G ++ R A+G++Q+DLA ++ K Q V YEA R
Sbjct: 68 AKDDGNYKNMR-QKAGGDPGLALIVARIARGLTQRDLAWRLGLKEQQVQRYEADR 121
>UniRef50_A7FXB8 Cluster: DNA-binding protein; n=2; Clostridium
botulinum A|Rep: DNA-binding protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 183
Score = 33.5 bits (73), Expect = 1.3
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +2
Query: 146 DLGKLIMQGRQAKG------MSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
DLGKLI + R+ K +QK LA +I + + D E GR P+ L I RA
Sbjct: 6 DLGKLIKKAREYKSKKTYKLFTQKMLADEIGKSRSYICDIERGRTYPSFATLSAIARACD 65
Query: 308 IKL 316
+ L
Sbjct: 66 VPL 68
>UniRef50_A6DY12 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. TM1035|Rep: Putative uncharacterized
protein - Roseovarius sp. TM1035
Length = 157
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
D G+ + + R + +SQ++L+ I + D EAGR P+ L +++ G++
Sbjct: 5 DFGQSLREWRVTQKLSQRELSAAIGVSRGYIGDIEAGRSEPSRNFLERLQERFGLR 60
>UniRef50_A6CG08 Cluster: Transcriptional regulator, XRE family
protein; n=1; Planctomyces maris DSM 8797|Rep:
Transcriptional regulator, XRE family protein -
Planctomyces maris DSM 8797
Length = 160
Score = 33.5 bits (73), Expect = 1.3
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +2
Query: 71 QHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 250
Q T + LD E E +K +GK I + R+A MSQ+ L+ K ++ E
Sbjct: 73 QEPITVSRLDLDHEPGE-EIQKWMNFVGKKIHRYRKAAKMSQEVLSEKTGLPQSHISRLE 131
Query: 251 AGRGIPNNIVLGKIERAIGIKL 316
+G+ P+N L KI A+ I++
Sbjct: 132 SGKHSPSNATLKKIAAALDIEI 153
>UniRef50_A4NX31 Cluster: Putative uncharacterized protein; n=1;
Haemophilus influenzae 22.4-21|Rep: Putative
uncharacterized protein - Haemophilus influenzae 22.4-21
Length = 178
Score = 33.5 bits (73), Expect = 1.3
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 316 KFYSNCPFNFSKNNVIWNATTSFIIIYNLWFFTNFSGEVFLTHSFSLSALHYKFP 152
KFY N + K ++W+ +T +I +N+W F N +F++ YKFP
Sbjct: 57 KFYINT--SIEKGKMMWSLSTDWISAFNIWLFNN-------NIAFNVDGTIYKFP 102
>UniRef50_A3I6C0 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 182
Score = 33.5 bits (73), Expect = 1.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
L++G I Q R+ MSQ DLA++I ++ E G+ P+ + L KI + +
Sbjct: 4 LEVGVKIKQMRKKNKMSQDDLASQINLTKSHISKIENGKATPSLVTLSKIAEIFDVPM 61
>UniRef50_Q54K09 Cluster: G-protein-coupled receptor (GPCR) family
protein; n=1; Dictyostelium discoideum AX4|Rep:
G-protein-coupled receptor (GPCR) family protein -
Dictyostelium discoideum AX4
Length = 1095
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 286 SKNNVIWNATTSFIIIYNLWFFTNFSGEVFLTHS 185
SK NVIW + + I++YN F+ N S +V HS
Sbjct: 380 SKGNVIWCTSNAIIVVYNTTFY-NVSSKVINIHS 412
>UniRef50_A3H5L3 Cluster: Transcriptional regulator, XRE family;
n=1; Caldivirga maquilingensis IC-167|Rep:
Transcriptional regulator, XRE family - Caldivirga
maquilingensis IC-167
Length = 243
Score = 33.5 bits (73), Expect = 1.3
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG-RGIPNNIVLGKIERAI 304
GK + + R+ + Q +LA K+ P +++DYE+G R P + + K +A+
Sbjct: 28 GKELKRWREYFNIPQTELAIKLSTTPSVISDYESGRRKSPGSYFIKKFVKAL 79
>UniRef50_A2SSN6 Cluster: Helix-turn-helix domain protein; n=1;
Methanocorpusculum labreanum Z|Rep: Helix-turn-helix
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 177
Score = 33.5 bits (73), Expect = 1.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
D + I R AKG +QKDLA + + + +E G P K+E+ +GI L
Sbjct: 92 DYPQRIASARLAKGYTQKDLAFILKMQEGDIKKFERGERAPTEAERKKLEKELGIVL 148
>UniRef50_Q81TU5 Cluster: DNA-binding protein; n=14; Bacillus cereus
group|Rep: DNA-binding protein - Bacillus anthracis
Length = 294
Score = 33.1 bits (72), Expect = 1.8
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
DLG I + R K +SQ +L IC + QI + E G P++I+L ++ +GI
Sbjct: 5 DLGITIKELRIKKNISQSELCHGICSQSQI-SKIEKGVIYPSSILLYQLSERLGI 58
>UniRef50_Q733K6 Cluster: Helix-turn-helix domain protein; n=6;
Bacillaceae|Rep: Helix-turn-helix domain protein -
Bacillus cereus (strain ATCC 10987)
Length = 262
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNN---IVLGKI 292
+ G+ + + R+ KG+SQ+ LA K+ Q V+ +E G+G P I++G +
Sbjct: 1 MGFGEKLFKLRKEKGLSQEALAEKLNTTRQAVSKWENGQGFPETEKLIMIGNV 53
>UniRef50_Q0HYT8 Cluster: Transcriptional regulator, XRE family;
n=1; Shewanella sp. MR-7|Rep: Transcriptional regulator,
XRE family - Shewanella sp. (strain MR-7)
Length = 96
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
L++G+ I+ R+ +GM+Q DLA ++ P+ ++ E G + ++ L I A+G
Sbjct: 6 LEIGQWIVDQRKKRGMTQLDLAEEVGVSPRTLSKIENGYDMKMSLFLA-ITEAVG 59
>UniRef50_A3Y8G1 Cluster: Transcriptional regulator, putative; n=1;
Marinomonas sp. MED121|Rep: Transcriptional regulator,
putative - Marinomonas sp. MED121
Length = 184
Score = 33.1 bits (72), Expect = 1.8
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+D+G+ ++ R+ KG+SQ+DLA + ++ E R P+ L KI +G+ L
Sbjct: 1 MDIGERLLTIRRNKGLSQRDLAKRAGVTNSAISMIETNRVSPSVSSLEKILAGMGMSL 58
>UniRef50_A0NKA2 Cluster: Transcriptional regulator,
helix-turn-helix XRE-family; n=1; Oenococcus oeni ATCC
BAA-1163|Rep: Transcriptional regulator,
helix-turn-helix XRE-family - Oenococcus oeni ATCC
BAA-1163
Length = 143
Score = 33.1 bits (72), Expect = 1.8
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIER 298
+G+ + + RQ G+SQ+ +A K+ Q V+ +E R IP+ L K+ +
Sbjct: 3 IGQKLQEQRQRNGLSQQQVAQKLNVTRQTVSSWEKDRTIPDPNSLKKLSK 52
>UniRef50_Q82Z07 Cluster: Zinc-binding transcriptional regulator,
Cro/CI family; n=3; Lactobacillales|Rep: Zinc-binding
transcriptional regulator, Cro/CI family - Enterococcus
faecalis (Streptococcus faecalis)
Length = 379
Score = 32.7 bits (71), Expect = 2.3
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 155 KLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIP 268
K + R A+G++ K+LA K Q++++YE+G+ IP
Sbjct: 10 KQLTSARIARGLTMKELAEKAELSRQMISNYESGKTIP 47
>UniRef50_Q7NYR0 Cluster: Putative uncharacterized protein; n=1;
Chromobacterium violaceum|Rep: Putative uncharacterized
protein - Chromobacterium violaceum
Length = 115
Score = 32.7 bits (71), Expect = 2.3
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
E++ +G+ + + R+A GM+Q+DLA K+ + ++ E GR P + L ++ +G
Sbjct: 7 EQLNQRIGQAVARHRKALGMNQEDLAEKLGVGLEAISRLERGRIKPTLVRLLELAEVLG 65
>UniRef50_Q392E3 Cluster: Transcriptional regulator, XRE family;
n=4; Burkholderia|Rep: Transcriptional regulator, XRE
family - Burkholderia sp. (strain 383) (Burkholderia
cepacia (strain ATCC 17760/ NCIB 9086 / R18194))
Length = 281
Score = 32.7 bits (71), Expect = 2.3
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 140 PLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
P +LG+L+ R +G+SQ DL+ + ++ E+GR +P L + + + + L
Sbjct: 12 PHELGQLLRYWRDVRGVSQLDLSLDAGISQRQISFIESGRSVPGRDTLLTLAQTLDVPL 70
>UniRef50_Q46240 Cluster: NanH gene & ORF1,2,3 & 4; n=2; Clostridium
perfringens|Rep: NanH gene & ORF1,2,3 & 4 - Clostridium
perfringens
Length = 265
Score = 32.7 bits (71), Expect = 2.3
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPN 271
+ L + + R+ +G+SQ+DLA K+ Q V+ +E+G+ +P+
Sbjct: 1 MKLAEKLQLMRKREGLSQEDLAEKLGISRQAVSKWESGQSVPD 43
>UniRef50_Q41GZ0 Cluster: Helix-turn-helix motif; n=1;
Exiguobacterium sibiricum 255-15|Rep: Helix-turn-helix
motif - Exiguobacterium sibiricum 255-15
Length = 292
Score = 32.7 bits (71), Expect = 2.3
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+ +P +G I + R+ K M+QK+L IC + +I + E GR P +L +I + + +
Sbjct: 3 KSLPHMIGNEIKRIRKEKKMTQKELCDGICSQAEI-SKIENGRNSPTIDLLQQISKRLRV 61
Query: 311 KL 316
L
Sbjct: 62 PL 63
>UniRef50_Q3ETE5 Cluster: Transcriptional regulator, MerR family;
n=1; Bacillus thuringiensis serovar israelensis ATCC
35646|Rep: Transcriptional regulator, MerR family -
Bacillus thuringiensis serovar israelensis ATCC 35646
Length = 194
Score = 32.7 bits (71), Expect = 2.3
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
++GK+I + R+AKG+S L I Q ++ YE G+ + VL I +A+ + +
Sbjct: 4 NIGKVIKEIRKAKGISAFVLGEMIGVSQQAISQYENGKRKISFEVLNNIAKALNVPM 60
>UniRef50_Q212H0 Cluster: Transcriptional regulator, XRE family;
n=2; Alphaproteobacteria|Rep: Transcriptional regulator,
XRE family - Rhodopseudomonas palustris (strain BisB18)
Length = 98
Score = 32.7 bits (71), Expect = 2.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 161 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
I + R+ G+SQ +LA ++ V E+GRG P+ L + +A G KL
Sbjct: 34 IAKARRRAGLSQAELARRMNTTQSTVARLESGRGQPSTRTLLRFAKATGHKL 85
>UniRef50_Q0LS22 Cluster: Helix-turn-helix type 3; n=1; Caulobacter
sp. K31|Rep: Helix-turn-helix type 3 - Caulobacter sp.
K31
Length = 251
Score = 32.7 bits (71), Expect = 2.3
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPN---NIVLGKIERAI 304
G+ + R A G+S+ DLA +I + + D+EAGR P +VL IER +
Sbjct: 7 GEDVKAFRDAHGLSRLDLADRIGGAVRTIEDWEAGRRQPPPLLRLVLAAIERKL 60
>UniRef50_A4MJV9 Cluster: Transcriptional regulator, XRE family;
n=1; Petrotoga mobilis SJ95|Rep: Transcriptional
regulator, XRE family - Petrotoga mobilis SJ95
Length = 105
Score = 32.7 bits (71), Expect = 2.3
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
+K LDL I + R G++QKDLA ++ I++ +E G P + L ++ +G
Sbjct: 13 KKALLDLVYEIKKRRLQMGITQKDLAERMGTTQAIISKFEKGNYNPTYLFLQRLTEVLG 71
>UniRef50_A7SWI9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 112
Score = 32.7 bits (71), Expect = 2.3
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 345 CSGWPLSFPRSFIPIALSIFPRTM-LFGMP 259
CS +SFP SFIP +S FP TM LF P
Sbjct: 61 CSFILISFPMSFIPYTVSFFPYTMSLFPYP 90
>UniRef50_Q747E3 Cluster: Transcriptional regulator, Cro/CI family;
n=5; Geobacter|Rep: Transcriptional regulator, Cro/CI
family - Geobacter sulfurreducens
Length = 212
Score = 32.3 bits (70), Expect = 3.1
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
LG I + RQA+GM+QK A + ++ E GR +P++ ++ + R G+ +
Sbjct: 12 LGGRIRKLRQARGMTQKAFADSLGIVQGFLSSIERGRKVPSDTLVIALCRTYGVNV 67
>UniRef50_Q3YQT0 Cluster: Transcriptional regulator; n=9; canis
group|Rep: Transcriptional regulator - Ehrlichia canis
(strain Jake)
Length = 215
Score = 32.3 bits (70), Expect = 3.1
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +2
Query: 20 QGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLD--LGKLIMQGRQAKGMS 193
+GI +D A N + ++T +L T+ H P+D +GK I + R +GMS
Sbjct: 41 EGIRLDVDDY--ASKNFKKEGAESTKELKSATKVRPH---PVDECVGKEIKRQRIMRGMS 95
Query: 194 QKDLATKICEKPQIVNDYEAGRGIPNNIVLGKI 292
Q LA K+ Q V YE G N IV+ ++
Sbjct: 96 QNQLANKLGITFQQVQKYEKG---TNRIVISRL 125
>UniRef50_Q18WP6 Cluster: Transcriptional regulator, XRE family;
n=4; Clostridiales|Rep: Transcriptional regulator, XRE
family - Desulfitobacterium hafniense (strain DCB-2)
Length = 198
Score = 32.3 bits (70), Expect = 3.1
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
+G+LI+Q R+ KG++Q+ +A + + ++ +E G G P+ + + +G
Sbjct: 6 VGRLILQLRKEKGLTQQQVADMLNISNKTISKWERGLGCPDVTLWSGLSAVLG 58
>UniRef50_Q03G62 Cluster: Putative uncharacterized protein; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Putative
uncharacterized protein - Pediococcus pentosaceus
(strain ATCC 25745 / 183-1w)
Length = 69
Score = 32.3 bits (70), Expect = 3.1
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 113 TEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEK-PQIVNDYEAGRGIP-NNIVLG 286
TEE+ E L+L I R+ KGM+Q+ L I EK P +V+ G P + V
Sbjct: 2 TEEMALENQALELQLKIEIARKRKGMTQEQLTAAIGEKWPSVVSRAIRGDQSPKSKRVRE 61
Query: 287 KIERAIGI 310
KI + +GI
Sbjct: 62 KIYKVLGI 69
>UniRef50_A0QLC0 Cluster: Transcriptional regulatory protein; n=1;
Mycobacterium avium 104|Rep: Transcriptional regulatory
protein - Mycobacterium avium (strain 104)
Length = 86
Score = 32.3 bits (70), Expect = 3.1
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 104 DRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVL 283
D ++ ++ + LDL LI + R GM+Q LA + V +E+G +P +L
Sbjct: 9 DSDSLDIHEAGLALDLPDLIFETRAGAGMNQAALAQALGVPRASVAAWESGTEVPRVDML 68
Query: 284 GKIERAIGIKL 316
++ + G +L
Sbjct: 69 QRLAQVCGKRL 79
>UniRef50_A1RY29 Cluster: Helix-turn-helix domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Helix-turn-helix domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 134
Score = 32.3 bits (70), Expect = 3.1
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 131 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
E I + G++I R+ G ++ LA + EK + EAG+ P + K+E+ + +
Sbjct: 40 EIIVENYGEIIRSARERMGWTRDVLAAMVGEKESTIRRIEAGQLEPTIDLARKLEKVLKV 99
Query: 311 KL 316
KL
Sbjct: 100 KL 101
>UniRef50_Q5ZSF5 Cluster: Phage repressor; n=5; Legionella
pneumophila|Rep: Phage repressor - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 225
Score = 31.9 bits (69), Expect = 4.1
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICE-KPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+GK I + R+AKG++++ LA + KP +N++E G +P + ++ +A+ +
Sbjct: 7 IGKRIHEARKAKGLTRQALADLTDDIKPSRINNWEHGTRMPGPEEITQLAQALEV 61
>UniRef50_Q2RGY9 Cluster: Transcriptional regulator, XRE family with
cupin sensor domain; n=1; Moorella thermoacetica ATCC
39073|Rep: Transcriptional regulator, XRE family with
cupin sensor domain - Moorella thermoacetica (strain
ATCC 39073)
Length = 178
Score = 31.9 bits (69), Expect = 4.1
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
LGK I Q R+ +GMS KD+A K ++ E P+ L KI A+ I +
Sbjct: 2 LGKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPI 57
>UniRef50_Q68VM1 Cluster: BzdR; n=1; Azoarcus sp. CIB|Rep: BzdR -
Azoarcus sp. CIB
Length = 298
Score = 31.9 bits (69), Expect = 4.1
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +2
Query: 86 KNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGI 265
+N+++L R L L LG I R +GM++K LA + + + E G G
Sbjct: 5 ENSSRLKRPDLSLEENNYLLMLGDRIRDLRAQRGMTRKMLAQQSGVSERYLAQLETGHGN 64
Query: 266 PNNIVLGKIERAIGIKL 316
+ I+L +I + +G +
Sbjct: 65 ISIILLRQIAQGLGFPI 81
>UniRef50_Q4AJJ7 Cluster: Helix-turn-helix motif; n=1; Chlorobium
phaeobacteroides BS1|Rep: Helix-turn-helix motif -
Chlorobium phaeobacteroides BS1
Length = 157
Score = 31.9 bits (69), Expect = 4.1
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 161 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+++ +++ MSQKDLA + PQ ++ GR + K+E A+GI L
Sbjct: 50 VLRSLRSRKMSQKDLAEMMGVTPQHISKIVKGRENLTLETIAKLEAALGIAL 101
>UniRef50_Q24R89 Cluster: Putative uncharacterized protein; n=1;
Desulfitobacterium hafniense Y51|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain Y51)
Length = 103
Score = 31.9 bits (69), Expect = 4.1
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+GKLI + R+AKG+SQK LA K + E+ + P L KI +G L
Sbjct: 38 IGKLI-EAREAKGLSQKQLADLAGLKQPAIARLESMKATPQIDTLFKILHPLGYTL 92
>UniRef50_Q1D7T5 Cluster: Conserved domain protein; n=2;
Cystobacterineae|Rep: Conserved domain protein -
Myxococcus xanthus (strain DK 1622)
Length = 128
Score = 31.9 bits (69), Expect = 4.1
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGR--GIPNNIVLGKIERA 301
+D GK + Q R+ +G+S+ D+A + P ++ EAG+ +P+ I + RA
Sbjct: 4 VDFGKYLSQQRELRGLSRDDVARETKIPPTLITALEAGQVERLPSRIFVVNYIRA 58
>UniRef50_Q184G8 Cluster: Putative uncharacterized protein; n=2;
Clostridium difficile|Rep: Putative uncharacterized
protein - Clostridium difficile (strain 630)
Length = 773
Score = 31.9 bits (69), Expect = 4.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 68 KQHVTTKNTAKLDRETEELRH------EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKP 229
K+ V N A+L TE++RH I +LGK+I G K + + EK
Sbjct: 413 KRGVMNSNLAELTCNTEKIRHCVSIVENSIDENLGKIIQSGMNKKVLVIVNTVKSAVEKY 472
Query: 230 QIVNDYEAGRGIPNNIVL 283
+++ + +GI N+ L
Sbjct: 473 ELIEEIVKPKGIDVNLNL 490
>UniRef50_A7D9D6 Cluster: Shikimate kinase; n=3;
Alphaproteobacteria|Rep: Shikimate kinase -
Methylobacterium extorquens PA1
Length = 384
Score = 31.9 bits (69), Expect = 4.1
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+LG+ + R +G+S+K L+ + + E+G+G + I+L ++ A+G++L
Sbjct: 99 ELGRRVRHARTVRGLSRKLLSQASGLSERYIAQLESGQGNVSIILLRRVANAMGMRL 155
>UniRef50_A6NW39 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 210
Score = 31.9 bits (69), Expect = 4.1
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKI 292
++L + I R+A GMSQ+ L + Q V+ +E+G+ P+ +GK+
Sbjct: 1 MELNERIAAARRAAGMSQEQLGEALGVSRQAVSKWESGQTKPDLEAVGKM 50
>UniRef50_A6GA55 Cluster: Transcriptional regulator, XRE family
protein; n=1; Plesiocystis pacifica SIR-1|Rep:
Transcriptional regulator, XRE family protein -
Plesiocystis pacifica SIR-1
Length = 266
Score = 31.9 bits (69), Expect = 4.1
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
G+ + R+ +G+SQ DLA + P+ ++ E GR P ++ ++ A+ + L
Sbjct: 10 GERLRAWRKRRGLSQMDLAIEADSTPRYISFIETGRSRPGRELVLRLVEALQLSL 64
>UniRef50_A4YW73 Cluster: Putative HTH-type transcriptional
regulator; n=1; Bradyrhizobium sp. ORS278|Rep: Putative
HTH-type transcriptional regulator - Bradyrhizobium sp.
(strain ORS278)
Length = 184
Score = 31.9 bits (69), Expect = 4.1
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
+++G + + R +KGM +DLA + +++ EAG+ +P+ +L K+ A+
Sbjct: 1 MNIGPRLRRARLSKGMRMRDLAQIVGCDESMISKIEAGKVMPSLPMLDKMVHAL 54
>UniRef50_A4BMI1 Cluster: Transcriptional regulator, XRE family
protein; n=1; Nitrococcus mobilis Nb-231|Rep:
Transcriptional regulator, XRE family protein -
Nitrococcus mobilis Nb-231
Length = 128
Score = 31.9 bits (69), Expect = 4.1
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2
Query: 95 AKLDRETEELRHEKIPLDLGKLIMQG-------RQAKGMSQKDLATKICEKPQIVNDYEA 253
A L R EEL IP +LG +MQG RQ +G++Q LA V+ EA
Sbjct: 43 AALKRGEEEL----IPAELGDALMQGESPIRVWRQYRGVTQAALANAAGITAAYVSQLEA 98
Query: 254 GRGIPNNIVLGKIERAIGIKL 316
G+ P+ VL + R + + +
Sbjct: 99 GKRQPSVEVLRAMARKLSVDI 119
>UniRef50_A3W916 Cluster: Probable transcriptional regulator; n=3;
Rhodobacteraceae|Rep: Probable transcriptional regulator
- Roseovarius sp. 217
Length = 373
Score = 31.9 bits (69), Expect = 4.1
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 125 RHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEK--PQIVNDYEAGRGIPNNIVLGKIER 298
R E+I G+ + R+ G+S + LA ++ Q ++ YEA + +P++ VL + +
Sbjct: 10 RRERIMF--GQRLRLARKRAGLSMQALAERVTPSVSAQAISKYEADKMMPSSSVLVGLGK 67
Query: 299 AIGIKL 316
A+G+ L
Sbjct: 68 ALGVSL 73
>UniRef50_A1IGF9 Cluster: Putative uncharacterized protein; n=1;
Enterococcus faecium|Rep: Putative uncharacterized
protein - Enterococcus faecium (Streptococcus faecium)
Length = 105
Score = 31.9 bits (69), Expect = 4.1
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPN 271
+ + K+I Q R K ++Q+DLA + + ++++E GR IP+
Sbjct: 1 MTISKVIKQKRIEKQLTQEDLAEMLLVSKKTISNWENGRTIPD 43
>UniRef50_A1HTM8 Cluster: Transcriptional regulator, XRE family;
n=1; Thermosinus carboxydivorans Nor1|Rep:
Transcriptional regulator, XRE family - Thermosinus
carboxydivorans Nor1
Length = 110
Score = 31.9 bits (69), Expect = 4.1
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 161 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
I Q R G+SQ+ LA + K + +E GR PN+ + KI A G+
Sbjct: 8 IRQARHLAGLSQEKLADVVGVKRVTLAAWETGRNEPNSEHIRKIALACGV 57
>UniRef50_UPI00005100D5 Cluster: COG1396: Predicted transcriptional
regulators; n=1; Brevibacterium linens BL2|Rep: COG1396:
Predicted transcriptional regulators - Brevibacterium
linens BL2
Length = 197
Score = 31.5 bits (68), Expect = 5.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+G LI R++ GM+ DL+ +++ E GRG P + L KI +A +
Sbjct: 18 MGALIRSLRESAGMTLTDLSRMAGVSQGLLSQIERGRGNPAYLTLLKIAKAFDV 71
>UniRef50_Q5WCS3 Cluster: Transcriptional regulator; n=1; Bacillus
clausii KSM-K16|Rep: Transcriptional regulator -
Bacillus clausii (strain KSM-K16)
Length = 193
Score = 31.5 bits (68), Expect = 5.4
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 116 EEL-RHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKI 292
EEL ++++ +GK + Q R +KGMS + LA +I + E G G P V+ KI
Sbjct: 7 EELSKNQEAGKQIGKNLRQLRTSKGMSIEALAQQIGVSKLTLLKIEQGEGNPTLSVIWKI 66
Query: 293 ERAIGIKL 316
+ I +
Sbjct: 67 ANGLHIPI 74
>UniRef50_Q5FQ46 Cluster: Putative uncharacterized protein; n=1;
Gluconobacter oxydans|Rep: Putative uncharacterized
protein - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 203
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
L+LG+ I R+ G+SQ+ LA K+ V +E GR LG + + +G++
Sbjct: 81 LELGRRIRLLREMAGLSQQQLADKVGISRSAVAFWETGRSGHVGKHLGSLAQVLGVE 137
>UniRef50_Q30ZR3 Cluster: Transcriptional regulator, XRE family;
n=1; Desulfovibrio desulfuricans G20|Rep:
Transcriptional regulator, XRE family - Desulfovibrio
desulfuricans (strain G20)
Length = 328
Score = 31.5 bits (68), Expect = 5.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGR 259
+LG+ + Q R+A+GMS KD + +I++ E GR
Sbjct: 5 ELGQALRQAREARGMSLKDAEKRTKIAARIISSIEEGR 42
>UniRef50_Q4J1C7 Cluster: Helix-turn-helix motif; n=15;
Pseudomonadaceae|Rep: Helix-turn-helix motif -
Azotobacter vinelandii AvOP
Length = 139
Score = 31.5 bits (68), Expect = 5.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 173 RQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
R+A+ MSQ+ LA + P ++ E G P++ + + RA+GI
Sbjct: 87 REAQNMSQEQLARAVGISPSYLDMIETGERQPDSAIQRALARALGI 132
>UniRef50_Q0I2C4 Cluster: Putative uncharacterized protein; n=1;
Haemophilus somnus 129PT|Rep: Putative uncharacterized
protein - Haemophilus somnus (strain 129Pt) (Histophilus
somni (strain 129Pt))
Length = 141
Score = 31.5 bits (68), Expect = 5.4
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 110 ETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDY-EAGRGIPNNIVLG 286
++E +++ ++LGKLI R+ KG SQ+ LA K + P Y E G P+ V
Sbjct: 2 KSENEDKKRLKVELGKLIKSNRETKGDSQRGLA-KFIDLPNSNLKYIEDGINAPSPEVYK 60
Query: 287 KI 292
KI
Sbjct: 61 KI 62
>UniRef50_A7HXN4 Cluster: SH3 type 3 domain protein; n=1;
Parvibaculum lavamentivorans DS-1|Rep: SH3 type 3 domain
protein - Parvibaculum lavamentivorans DS-1
Length = 293
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGR 259
++G+ + RQA G+S KD+A ++ +P + EAG+
Sbjct: 10 EIGETLRDARQAAGLSLKDIADRLRIRPVYLQAIEAGQ 47
>UniRef50_A6PMA5 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 999
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 23 GIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHE-KIPLDLGKLIMQGRQAKGMSQK 199
G+ D++++YG +V T N + + EEL E P ++GKL+++GR+ + ++
Sbjct: 316 GLKFDSRKRYGF---HDYVATLNRWRDGVKPEELAAEVAFPPEIGKLVLKGRENRKIAVG 372
Query: 200 DLATKICEK 226
++A + ++
Sbjct: 373 EVAALLAKQ 381
>UniRef50_A5KNK7 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 223
Score = 31.5 bits (68), Expect = 5.4
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 128 HEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
+EK LG+ I R+ +GM Q++LA KI Q ++ E G P L KI +G
Sbjct: 4 YEKKISFLGENIQIIRKHRGMKQQELANKIGINMQSLSKIERGVNYPTFDTLEKIMDVLG 63
Query: 308 I 310
+
Sbjct: 64 V 64
>UniRef50_A4F7C1 Cluster: Putative DNA-binding protein; n=2;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
DNA-binding protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 399
Score = 31.5 bits (68), Expect = 5.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
L +G+ + R+ G+SQ LAT+ +V E GR + + RA+GI+
Sbjct: 8 LTIGERLAMARKVAGLSQHALATRAAYSVSMVRAVEQGREPASPAFVAAAARALGIE 64
>UniRef50_A1SKA3 Cluster: Helix-turn-helix domain protein; n=1;
Nocardioides sp. JS614|Rep: Helix-turn-helix domain
protein - Nocardioides sp. (strain BAA-499 / JS614)
Length = 104
Score = 31.5 bits (68), Expect = 5.4
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+G + + R+ G + D+A Q +++ E GR P++ VLG + A+G++L
Sbjct: 27 VGYELREERRTAGRTLADVAGAAGVSTQYLSEVERGRKEPSSEVLGAVAGALGLRL 82
>UniRef50_A0THR7 Cluster: Transcriptional regulator, XRE family;
n=1; Burkholderia ambifaria MC40-6|Rep: Transcriptional
regulator, XRE family - Burkholderia ambifaria MC40-6
Length = 207
Score = 31.5 bits (68), Expect = 5.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGR 259
LG+ + Q R+A+G++Q LAT + Q YE GR
Sbjct: 84 LGERMAQFRKARGITQVQLATTLGVSQQTYQSYEVGR 120
>UniRef50_A0NHQ3 Cluster: Transcriptional regulator,
helix-turn-helix XRE-family; n=1; Oenococcus oeni ATCC
BAA-1163|Rep: Transcriptional regulator,
helix-turn-helix XRE-family - Oenococcus oeni ATCC
BAA-1163
Length = 122
Score = 31.5 bits (68), Expect = 5.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 173 RQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
R K +SQKDLA K+ Q ++ +E+G P+ L K+ + + L
Sbjct: 12 RNKKNLSQKDLAGKLFISRQAISKWESGETTPDLNNLIKLSELLDVSL 59
>UniRef50_Q7S7B9 Cluster: Putative uncharacterized protein
NCU01273.1; n=4; Pezizomycotina|Rep: Putative
uncharacterized protein NCU01273.1 - Neurospora crassa
Length = 561
Score = 31.5 bits (68), Expect = 5.4
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 83 TKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQ--IVNDYEAG 256
+K T +L+RE E L+ + ++ L M + K +++ + K CEK I + G
Sbjct: 405 SKKTKRLERENENLKRKHEQVNGNILKMAEERNKYLAEIEDLKKKCEKLNGIIKQMQQQG 464
Query: 257 RGIPNNIVLGKIE 295
RGIP + G +E
Sbjct: 465 RGIPQGLA-GAVE 476
>UniRef50_Q6MW32 Cluster: Related to muscle-derived protein; n=23;
Ascomycota|Rep: Related to muscle-derived protein -
Neurospora crassa
Length = 497
Score = 31.5 bits (68), Expect = 5.4
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 83 TKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQ--IVNDYEAG 256
+K T +L+RE E L+ + ++ L M + K +++ + K CEK I + G
Sbjct: 341 SKKTKRLERENENLKRKHEQVNGNILKMAEERNKYLAEIEDLKKKCEKLNGIIKQMQQQG 400
Query: 257 RGIPNNIVLGKIE 295
RGIP + G +E
Sbjct: 401 RGIPQGLA-GAVE 412
>UniRef50_UPI00015B8E96 Cluster: UPI00015B8E96 related cluster; n=1;
unknown|Rep: UPI00015B8E96 UniRef100 entry - unknown
Length = 251
Score = 31.1 bits (67), Expect = 7.1
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
LG +I + R+A+G++Q D+A+ + V +E+G P+ L + R + + L
Sbjct: 12 LGPVIREARKARGLTQGDIASALKISRPAVGQWESGDTGPDRDRLPALARLLRVDL 67
>UniRef50_Q9X153 Cluster: LacI family transcriptional regulator,
putative; n=2; Thermotoga|Rep: LacI family
transcriptional regulator, putative - Thermotoga
maritima
Length = 111
Score = 31.1 bits (67), Expect = 7.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 116 EELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIE 295
EE ++ +G ++ R+ ++QKDLA K+ +V+ E G + VL KI
Sbjct: 8 EEKVFIEVMSQIGGQLLAYRKMHNLTQKDLAKKLGVSQSMVSKIETGEKNISIRVLAKIV 67
Query: 296 RAIGIKL 316
A+G K+
Sbjct: 68 AALGGKI 74
>UniRef50_Q9RN15 Cluster: PXO2-17; n=4; Bacillus cereus group|Rep:
PXO2-17 - Bacillus anthracis
Length = 626
Score = 31.1 bits (67), Expect = 7.1
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +2
Query: 68 KQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVND 244
K+ + + ++ +++ +E+ EK+ L+ L +Q R +G +KD +I E I+ D
Sbjct: 512 KEEIQAERISEQEKQRQEMEREKLELEKQALHLQMRNQEGAEKKD-KERIRELQNIIED 569
>UniRef50_Q9KBW0 Cluster: BH1814 protein; n=1; Bacillus
halodurans|Rep: BH1814 protein - Bacillus halodurans
Length = 297
Score = 31.1 bits (67), Expect = 7.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
L +G I RQ+ G+SQ+DLA IC + +++ E + P V I + +G
Sbjct: 4 LSVGHKIKTLRQSLGLSQRDLAEGICTQ-ALISHIEKNKTTPTVDVFFNIAKKLG 57
>UniRef50_Q9F2J9 Cluster: Putative regulatory protein; n=2;
Streptomyces|Rep: Putative regulatory protein -
Streptomyces coelicolor
Length = 449
Score = 31.1 bits (67), Expect = 7.1
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
D+G+ + + R +GM+Q+ LA + P ++ EAGR P++ L + +G+
Sbjct: 9 DIGRRVQRLRAERGMTQRQLA-EPAYTPAYISTLEAGRVRPSDEALRHLADRLGV 62
>UniRef50_Q5WC17 Cluster: Transcriptional regulator; n=1; Bacillus
clausii KSM-K16|Rep: Transcriptional regulator -
Bacillus clausii (strain KSM-K16)
Length = 303
Score = 31.1 bits (67), Expect = 7.1
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+G I R GMSQ+++++ + + I + E G+ IPN IVL I +G+
Sbjct: 5 IGMEIRNLRMKLGMSQENISSSVVSQSAI-SKIENGKYIPNIIVLEAIASKLGV 57
>UniRef50_Q2IJ13 Cluster: Transcriptional regulator, XRE family;
n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
Transcriptional regulator, XRE family - Anaeromyxobacter
dehalogenans (strain 2CP-C)
Length = 81
Score = 31.1 bits (67), Expect = 7.1
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +2
Query: 77 VTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG 256
+ TK + D EELR LG+ + + R+ +GM+Q+ LA + V+ E G
Sbjct: 1 MATKMKTQRDPRREELRR------LGERVREHRRGRGMTQEALAEALDLSVAYVSLIERG 54
Query: 257 RGIPNNIVLGKIERAIGI 310
P + I RA+GI
Sbjct: 55 GRNPPYTTVVAIARALGI 72
>UniRef50_Q4CA00 Cluster: Helix-turn-helix motif; n=3; Bacteria|Rep:
Helix-turn-helix motif - Crocosphaera watsonii
Length = 360
Score = 31.1 bits (67), Expect = 7.1
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG 256
G+++ + +A+G +QKDLA + PQ++N+ G
Sbjct: 14 GRILKRELEARGWTQKDLANIMNRPPQVINEIIKG 48
>UniRef50_A7MGV6 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 338
Score = 31.1 bits (67), Expect = 7.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 113 TEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 250
TE E P G+ + R+ G+SQ+ +A ++C K V D E
Sbjct: 3 TEATHEENAPHTTGERLRLAREQLGLSQQVVAERLCLKVSTVRDIE 48
>UniRef50_A6T9S4 Cluster: Putative regulator; n=3;
Enterobacteriaceae|Rep: Putative regulator - Klebsiella
pneumoniae subsp. pneumoniae MGH 78578
Length = 193
Score = 31.1 bits (67), Expect = 7.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 173 RQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
R+++G S DLA + +++ E G P +LG++ A GI +
Sbjct: 20 RESRGWSLNDLAERAGASRAMIHKIERGESSPTASMLGRLSGAFGISM 67
>UniRef50_A6NZ97 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 451
Score = 31.1 bits (67), Expect = 7.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
G I R+ KGM+QK+LA+ + + V+ +E G P + + +G+
Sbjct: 41 GSFIASLRREKGMTQKELASLLGISDKAVSKWERGESYPEITLFPALGATLGV 93
>UniRef50_A5MYI9 Cluster: Predicted transcriptional regulator with
an addtional conserved domain; n=1; Clostridium kluyveri
DSM 555|Rep: Predicted transcriptional regulator with an
addtional conserved domain - Clostridium kluyveri DSM
555
Length = 381
Score = 31.1 bits (67), Expect = 7.1
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 161 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
I + R+++G+S +L+ I Q ++ YE G P+ VL K+ A+ +
Sbjct: 13 IKEARESRGLSMSELSELIEVTSQAISQYEKGIMNPSVFVLKKMSNALNFPI 64
>UniRef50_A5I3V7 Cluster: Putative DNA-binding protein; n=3;
Clostridium botulinum A|Rep: Putative DNA-binding
protein - Clostridium botulinum A str. ATCC 3502
Length = 155
Score = 31.1 bits (67), Expect = 7.1
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIP 268
+ LG+ ++ R+ G+SQ+D+A K+ Q V+ +E + +P
Sbjct: 1 MSLGEKLLYLRKKAGLSQEDVAEKLSVSRQTVSKWETDQTVP 42
>UniRef50_A4EMV4 Cluster: Putative transcriptional regulator; n=1;
Roseobacter sp. CCS2|Rep: Putative transcriptional
regulator - Roseobacter sp. CCS2
Length = 143
Score = 31.1 bits (67), Expect = 7.1
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG-RGI 265
L LGK + Q R+ G++Q++ AT + + +++ EAG RG+
Sbjct: 36 LQLGKRLKQAREYIGVTQEEAATHLKVRRSAISEMEAGKRGV 77
>UniRef50_A3DFN6 Cluster: Transcriptional regulator, XRE family;
n=1; Clostridium thermocellum ATCC 27405|Rep:
Transcriptional regulator, XRE family - Clostridium
thermocellum (strain ATCC 27405 / DSM 1237)
Length = 374
Score = 31.1 bits (67), Expect = 7.1
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+++ + I++ R+ KG++Q+D+A I V+ +E G+ P+ L ++ I +
Sbjct: 4 INIARTIVKMRREKGLTQEDIANYIGVSKASVSKWETGQSYPDITFLPQLATLFNISI 61
>UniRef50_A3CPI8 Cluster: Transcriptional regulator, XRE family,
putative; n=1; Streptococcus sanguinis SK36|Rep:
Transcriptional regulator, XRE family, putative -
Streptococcus sanguinis (strain SK36)
Length = 197
Score = 31.1 bits (67), Expect = 7.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIP---NNIVLGKI 292
+ +GK I R+ K +SQ DLA I Q ++++E G P N ++L K+
Sbjct: 1 MQVGKQIQHYRKEKNLSQDDLAEIIFVSRQSISNWERGATYPDIQNLLLLSKV 53
>UniRef50_A1R204 Cluster: Putative helix-turn-helix domain protein;
n=1; Arthrobacter aurescens TC1|Rep: Putative
helix-turn-helix domain protein - Arthrobacter aurescens
(strain TC1)
Length = 133
Score = 31.1 bits (67), Expect = 7.1
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
+G+LI + R A+G+SQ LA + + V E+G I K+E A+G
Sbjct: 10 IGRLIKEERLAQGLSQVQLAKQAGTAIKTVRTLESGTRRTQEINQRKLEHALG 62
>UniRef50_A0ZBZ7 Cluster: Transcriptional Regulator of molybdate
metabolism, XRE family protein; n=5; Cyanobacteria|Rep:
Transcriptional Regulator of molybdate metabolism, XRE
family protein - Nodularia spumigena CCY 9414
Length = 379
Score = 31.1 bits (67), Expect = 7.1
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+L + Q R GMSQ+DLA Q ++ E+G+ P+ + ++ +A+G ++
Sbjct: 6 ELRNKLKQTRIRLGMSQQDLANLANVTRQTISGVESGQYAPSTTIALRLAKALGCQV 62
>UniRef50_Q9YAC8 Cluster: Putative HTH-type transcriptional
regulator; n=1; Aeropyrum pernix|Rep: Putative HTH-type
transcriptional regulator - Aeropyrum pernix
Length = 171
Score = 31.1 bits (67), Expect = 7.1
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +2
Query: 125 RHEKIPLDLGKL-------IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVL 283
R ++PLD+ L I + R+A+G S LA K+ ++ E+G+ P+ +
Sbjct: 68 RPRRVPLDMYDLVEDYPERIREAREARGWSTAVLAQKLRISETMLRRIESGKLKPSLDLA 127
Query: 284 GKIERAIGIKL 316
++E+ +G+KL
Sbjct: 128 KRMEKMLGVKL 138
>UniRef50_Q58006 Cluster: Uncharacterized HTH-type transcriptional
regulator MJ0586; n=6; Methanococcales|Rep:
Uncharacterized HTH-type transcriptional regulator
MJ0586 - Methanococcus jannaschii
Length = 170
Score = 31.1 bits (67), Expect = 7.1
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 68 KQHVTTKNTAKLDRETEELRHEKIPL---DLGKLIMQGRQAKGMSQKDLATKICEKPQIV 238
K +TT K + + +P+ D G +I + R+ +G+S ++LA K+ K +
Sbjct: 56 KGTITTNKQVKKPIKRRRDIFDTLPMLREDYGDVIREAREKRGLSIEELAKKLKMKASTL 115
Query: 239 NDYEAGRGIPNNIVLGKIERAIGIKL 316
+E PN + +E+ + I L
Sbjct: 116 QKFERYELEPNEKEIKILEKELKISL 141
>UniRef50_Q6MSW2 Cluster: Hypothetical transmembrane protein; n=1;
Mycoplasma mycoides subsp. mycoides SC|Rep: Hypothetical
transmembrane protein - Mycoplasma mycoides subsp.
mycoides SC
Length = 122
Score = 30.7 bits (66), Expect = 9.4
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = -3
Query: 346 LQWLASXFSXKFYSNCPFNFSKNNVIWNATTSFIII---YNLWFFTNFSGEVFL 194
L W ++ F +C FNFS NN+I+++ ++F +I + F+NFS V L
Sbjct: 24 LYWFSNCNLINF--SCWFNFSFNNLIFDSNSNFWLINCSNSFLLFSNFSISVLL 75
>UniRef50_Q63A79 Cluster: Possible transcriptional regulator/TPR
domain protein; n=2; Bacillus cereus group|Rep: Possible
transcriptional regulator/TPR domain protein - Bacillus
cereus (strain ZK / E33L)
Length = 423
Score = 30.7 bits (66), Expect = 9.4
Identities = 14/57 (24%), Positives = 33/57 (57%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 313
+++G+ I R KG++Q +L + IC + + E+G+ P++ + K+ + + +K
Sbjct: 1 MEIGERIRHVRMQKGLTQGELVSGICSITYL-SRIESGKITPSSSFIQKVSKKLEVK 56
>UniRef50_Q5Z3T1 Cluster: Putative DNA-binding protein; n=1;
Nocardia farcinica|Rep: Putative DNA-binding protein -
Nocardia farcinica
Length = 202
Score = 30.7 bits (66), Expect = 9.4
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
D+G++I R+A G+ Q++L+ ++ + + YE+G P + RA+
Sbjct: 4 DIGEIIRDRREALGLGQRELSERVGVTERQIGRYESGAQEPAASTCRLLARAL 56
>UniRef50_Q4JVR7 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium jeikeium K411|Rep: Putative
uncharacterized protein - Corynebacterium jeikeium
(strain K411)
Length = 294
Score = 30.7 bits (66), Expect = 9.4
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 128 HEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 307
H + G+ + R +G+SQ LA IC ++ +EAG +P + + +G
Sbjct: 4 HSSTGAEFGRRLRHARLDRGLSQNALAEGIC-SASAISRWEAGVHLPPEDAIWSLANRLG 62
Query: 308 I 310
I
Sbjct: 63 I 63
>UniRef50_Q2RLS7 Cluster: Transcriptional regulator, XRE family;
n=1; Moorella thermoacetica ATCC 39073|Rep:
Transcriptional regulator, XRE family - Moorella
thermoacetica (strain ATCC 39073)
Length = 128
Score = 30.7 bits (66), Expect = 9.4
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +2
Query: 143 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 304
+ +GK I + R+ G++Q++LA ++ + +YE+G P +L + +A+
Sbjct: 1 MSIGKRIKELREKIGLTQEELAERVQISRSALANYESGYREPKGEILVRFAKAL 54
>UniRef50_Q2RI10 Cluster: Transcriptional regulator, XRE family;
n=1; Moorella thermoacetica ATCC 39073|Rep:
Transcriptional regulator, XRE family - Moorella
thermoacetica (strain ATCC 39073)
Length = 300
Score = 30.7 bits (66), Expect = 9.4
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +2
Query: 11 ARRQGIPVD--TQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAK 184
+RR G+ + ++ + T K A L+ T L LG + + R+
Sbjct: 92 SRRSGVSLAHISEIERSRSTASLKTLEKLAAVLEVSTSSLLRSGQQDSLGAKLKRLREKI 151
Query: 185 GMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
G++QK+LA ++ ++ E R P+ L + A+G+
Sbjct: 152 GLTQKELAQQVGISHSLIGQIETDRIQPSLSTLSSLAEALGV 193
>UniRef50_Q2BF28 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
protein - Bacillus sp. NRRL B-14911
Length = 292
Score = 30.7 bits (66), Expect = 9.4
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 310
+G+ I R+ G+SQK+LA IC + QI + E G P L I + +G+
Sbjct: 6 IGQKIRDLRKLLGLSQKELAEGICTQAQI-SKIEKGDVYPYASTLYLISQKLGV 58
>UniRef50_Q184B4 Cluster: Putative phage DNA-binding protein; n=1;
Clostridium difficile 630|Rep: Putative phage
DNA-binding protein - Clostridium difficile (strain 630)
Length = 387
Score = 30.7 bits (66), Expect = 9.4
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPN-NIVLGKIERAIG 307
G+ + + R +GM+ +LA +I + Q V+ YE + PN N V+ +I R +G
Sbjct: 12 GERLKKARIYRGMTVAELAERIDCQRQTVSMYENNKSKPNDNNVVKRIARVLG 64
>UniRef50_Q039Z5 Cluster: Transcriptional regulator, xre family;
n=1; Lactobacillus casei ATCC 334|Rep: Transcriptional
regulator, xre family - Lactobacillus casei (strain ATCC
334)
Length = 295
Score = 30.7 bits (66), Expect = 9.4
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 149 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
LG + R+ KG+SQ +LA IC + I + E +P+ +L ++ +GI+L
Sbjct: 11 LGDKVRYYRKLKGLSQAELAANICTQATI-SLIEKRNKVPSMNILMRLIGRLGIQL 65
>UniRef50_A6AXT1 Cluster: HTH-type transcriptional regulator PuuR;
n=3; Vibrio|Rep: HTH-type transcriptional regulator PuuR
- Vibrio parahaemolyticus AQ3810
Length = 185
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
++GK I+Q R+ G+SQ++LA + ++ E G+ P+ L KI + L
Sbjct: 5 EIGKNIVQLRKKHGLSQRELAERAGITHSAISSIENGKVSPSVSSLQKIVNVFSLSL 61
>UniRef50_A5VKC5 Cluster: Transcriptional regulator, XRE family;
n=1; Lactobacillus reuteri F275|Rep: Transcriptional
regulator, XRE family - Lactobacillus reuteri F275
Length = 264
Score = 30.7 bits (66), Expect = 9.4
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG-RGIPNNIVLGKIERAIG 307
G I R+ K M+QK+L KI + +++YE G R IP L K+ A+G
Sbjct: 87 GNNIYVERKKKHMTQKELGMKIGVTREYISEYELGIRPIPIE-TLKKLSEALG 138
>UniRef50_A6N3H0 Cluster: XRE transcription regulator; n=2;
unclassified Myoviridae|Rep: XRE transcription regulator
- Burkholderia phage BcepNY3
Length = 67
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +2
Query: 161 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
+++ R A+ S +L+ + + ++ D+EA + +PN L ++ A+G+ L
Sbjct: 7 LIKARNARAWSAPELSRRAGVRHSLIYDFEADKRLPNLKTLLRLADALGVTL 58
>UniRef50_A2FKP9 Cluster: CAMK family protein kinase; n=1;
Trichomonas vaginalis G3|Rep: CAMK family protein kinase
- Trichomonas vaginalis G3
Length = 328
Score = 30.7 bits (66), Expect = 9.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 137 IPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNI 277
IP +L K ++ G K Q+ A+ IC P +V++YE + + N++
Sbjct: 281 IPQEL-KDVIAGLLEKNPDQRMTASDICNNPWLVSEYEESQNLYNSL 326
>UniRef50_A0DEA8 Cluster: Chromosome undetermined scaffold_479,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_479,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 266
Score = 30.7 bits (66), Expect = 9.4
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 373 IPLFLSARRLQWLASXFSXKFYSNCPFNFSKNNVIWNATTSFII--IYNLWFFTNFSGEV 200
+PLFL A L L S F + YS C F + V+ + +F+ YNL+ +
Sbjct: 93 LPLFLLAHYLIILTSYFQYQQYSGCKFLYYCQIVLIFRSQAFVFKTDYNLYINRLVDVYI 152
Query: 199 FLTHSFSLSAL 167
+L F++ +L
Sbjct: 153 YLMFIFNVGSL 163
>UniRef50_Q12UR4 Cluster: Transcriptional regulator, XRE family;
n=9; Methanomicrobia|Rep: Transcriptional regulator, XRE
family - Methanococcoides burtonii (strain DSM 6242)
Length = 246
Score = 30.7 bits (66), Expect = 9.4
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 152 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG-RGIPNNIVLGKIERAI 304
G+ + + R ++Q DL+ + P +++DYE+G R P +++ KI A+
Sbjct: 29 GEALKKWRLNFEIAQTDLSGYLKVSPSVISDYESGRRKSPGTLIVSKIVAAL 80
>UniRef50_P44030 Cluster: Uncharacterized HTH-type transcriptional
regulator HI0659; n=25; Bacteria|Rep: Uncharacterized
HTH-type transcriptional regulator HI0659 - Haemophilus
influenzae
Length = 98
Score = 30.7 bits (66), Expect = 9.4
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 116 EELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIE 295
EE+R + + L K ++ RQ G+SQK L T K ++ E G+ P L K+
Sbjct: 22 EEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKLL 81
Query: 296 RAIG 307
+G
Sbjct: 82 APLG 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,144,075
Number of Sequences: 1657284
Number of extensions: 6199639
Number of successful extensions: 18409
Number of sequences better than 10.0: 192
Number of HSP's better than 10.0 without gapping: 17962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18391
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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