Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d08f
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   5.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   7.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   9.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    20   9.5  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 146 DLGKLIMQGRQAKGMSQKDLATKICEKPQIV 238
           D  KL+   R+       DL   IC  PQ+V
Sbjct: 464 DGSKLVSIQRKCNHGLVYDLELNICNYPQVV 494


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 250 FIIIYNLWFFTNFSGEVFL 194
           +II+   W+  N S  +FL
Sbjct: 260 YIIVVIFWYTVNASTNIFL 278


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 250 FIIIYNLWFFTNFSGEVFL 194
           +II+   W+  N S  +FL
Sbjct: 260 YIIVVIFWYTVNASTNIFL 278


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = -3

Query: 337 LASXFSXKFYSNCPFNFSKNNVIWNATTSFIIIYNLWFFTNFSG 206
           L S +S   Y + PFN            S  +  N W+  + +G
Sbjct: 153 LGSVYSRHPYESWPFNTMSGATHHGGIKSDSVTSNAWWDVHSTG 196


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 280 NNVIWNATTSFIIIYNL 230
           NN  W     +I++Y L
Sbjct: 157 NNTTWRCLYRWIVLYTL 173


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 125 RHEKIPLDLGK 157
           +H KI LD+GK
Sbjct: 187 QHHKIVLDMGK 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,920
Number of Sequences: 336
Number of extensions: 1613
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)