Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d08f
         (378 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457566-1|AAL68796.1|  147|Anopheles gambiae multiprotein bridg...   180   1e-47
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    27   0.17 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    27   0.17 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   6.5  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    22   6.5  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    22   8.6  

>AF457566-1|AAL68796.1|  147|Anopheles gambiae multiprotein bridging
           factor-like proteinprotein.
          Length = 147

 Score =  180 bits (439), Expect = 1e-47
 Identities = 82/105 (78%), Positives = 94/105 (89%)
 Frame = +2

Query: 2   VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
           +N ARRQGIPV+T QK+ AGTNKQHV  KNTAKLDRET+ELRH+ +   + KLIMQGRQA
Sbjct: 28  INKARRQGIPVETTQKFNAGTNKQHVAAKNTAKLDRETDELRHKTLAPSVAKLIMQGRQA 87

Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
           KG+SQKDLAT+ICEKPQIVNDYEAGRG+PNN++LGKIER IGIKL
Sbjct: 88  KGLSQKDLATQICEKPQIVNDYEAGRGVPNNLILGKIERIIGIKL 132


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = +2

Query: 11  ARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELR--HEKIPLDLGKLIMQGRQAK 184
           AR + I  +  Q     T +Q  T +       E E++R  HE+    L KL+MQG  A 
Sbjct: 17  ARNERINEELTQMRILMTKQQEYTERRELIAREEMEKMRAAHERDRTALNKLLMQG--AG 74

Query: 185 GMSQKDLATKICEKPQ 232
             S +  AT     PQ
Sbjct: 75  TSSHRAAATPTTPTPQ 90


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 14  RRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHE-KIPLDLGKLIMQGRQAKGM 190
           +RQ + V TQQ+      +QH    N  +  R  E+LR+E + P  L +  +    A+G 
Sbjct: 83  QRQAV-VGTQQQQQRRQQQQHQQRSNATQAQRR-EQLRNEQRRPARLRQDQIIFEPAEGT 140

Query: 191 SQKDLATKICEKPQI 235
           S K L  KI   P++
Sbjct: 141 SYKVLYEKIRLNPRL 155


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 62  FQPHIFVAYQPEYLVAA 12
           F+  +FV YQPE +  A
Sbjct: 227 FRTDVFVRYQPETIACA 243


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 26  IPVDTQQKYGAGTNKQHVTTKNTA 97
           +P+DT  ++GA      +T K  A
Sbjct: 72  VPIDTANRFGADDGGASLTQKTCA 95


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 266 ECHDQLHNHL 237
           ECHD+L +HL
Sbjct: 211 ECHDKLADHL 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,801
Number of Sequences: 2352
Number of extensions: 6637
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)