Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d08f
         (378 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132156-1|AAD34744.1|  145|Drosophila melanogaster unknown prot...   196   8e-51
AE014296-2756|AAN11755.1|  145|Drosophila melanogaster CG4143-PB...   196   8e-51
AE014296-2755|AAF49449.1|  145|Drosophila melanogaster CG4143-PA...   196   8e-51
AB031273-1|BAA83523.1|  145|Drosophila melanogaster Multiprotein...   196   8e-51
AY075562-1|AAL68369.1|  343|Drosophila melanogaster RH68403p pro...    28   3.5  
AF241834-1|AAF64492.1|  343|Drosophila melanogaster secretory ca...    28   3.5  
AF224720-1|AAF35367.1|  343|Drosophila melanogaster secretory ca...    28   3.5  
AE014298-2146|AAF48452.1|  343|Drosophila melanogaster CG9195-PA...    28   3.5  

>AF132156-1|AAD34744.1|  145|Drosophila melanogaster unknown
           protein.
          Length = 145

 Score =  196 bits (478), Expect = 8e-51
 Identities = 89/105 (84%), Positives = 99/105 (94%)
 Frame = +2

Query: 2   VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
           VN ARRQG+ VDTQQKYGAGTNKQHVTTKNTAKLDRETEELRH+KIPLD+GKLI QGRQ+
Sbjct: 26  VNQARRQGVAVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHDKIPLDVGKLIQQGRQS 85

Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
           KG+SQKDLATKICEK Q+V DYEAGRGIPNN++LGK+ER +GIKL
Sbjct: 86  KGLSQKDLATKICEKQQVVTDYEAGRGIPNNLILGKMERVLGIKL 130


>AE014296-2756|AAN11755.1|  145|Drosophila melanogaster CG4143-PB,
           isoform B protein.
          Length = 145

 Score =  196 bits (478), Expect = 8e-51
 Identities = 89/105 (84%), Positives = 99/105 (94%)
 Frame = +2

Query: 2   VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
           VN ARRQG+ VDTQQKYGAGTNKQHVTTKNTAKLDRETEELRH+KIPLD+GKLI QGRQ+
Sbjct: 26  VNQARRQGVAVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHDKIPLDVGKLIQQGRQS 85

Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
           KG+SQKDLATKICEK Q+V DYEAGRGIPNN++LGK+ER +GIKL
Sbjct: 86  KGLSQKDLATKICEKQQVVTDYEAGRGIPNNLILGKMERVLGIKL 130


>AE014296-2755|AAF49449.1|  145|Drosophila melanogaster CG4143-PA,
           isoform A protein.
          Length = 145

 Score =  196 bits (478), Expect = 8e-51
 Identities = 89/105 (84%), Positives = 99/105 (94%)
 Frame = +2

Query: 2   VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
           VN ARRQG+ VDTQQKYGAGTNKQHVTTKNTAKLDRETEELRH+KIPLD+GKLI QGRQ+
Sbjct: 26  VNQARRQGVAVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHDKIPLDVGKLIQQGRQS 85

Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
           KG+SQKDLATKICEK Q+V DYEAGRGIPNN++LGK+ER +GIKL
Sbjct: 86  KGLSQKDLATKICEKQQVVTDYEAGRGIPNNLILGKMERVLGIKL 130


>AB031273-1|BAA83523.1|  145|Drosophila melanogaster Multiprotein
           Bridging Factor 1 protein.
          Length = 145

 Score =  196 bits (478), Expect = 8e-51
 Identities = 89/105 (84%), Positives = 99/105 (94%)
 Frame = +2

Query: 2   VNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA 181
           VN ARRQG+ VDTQQKYGAGTNKQHVTTKNTAKLDRETEELRH+KIPLD+GKLI QGRQ+
Sbjct: 26  VNQARRQGVAVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHDKIPLDVGKLIQQGRQS 85

Query: 182 KGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 316
           KG+SQKDLATKICEK Q+V DYEAGRGIPNN++LGK+ER +GIKL
Sbjct: 86  KGLSQKDLATKICEKQQVVTDYEAGRGIPNNLILGKMERVLGIKL 130


>AY075562-1|AAL68369.1|  343|Drosophila melanogaster RH68403p
           protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/77 (25%), Positives = 29/77 (37%)
 Frame = +2

Query: 20  QGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQK 199
           Q IP       GA      +    + +L R  EEL  +   LD  +  +QG   +  +  
Sbjct: 70  QNIPPPQTSSLGASAPSTSIQI-TSEELQRRQEELDRKAAELDRREQQLQGNVPQLNNWP 128

Query: 200 DLATKICEKPQIVNDYE 250
            L    C KP    D+E
Sbjct: 129 PLPDNFCVKPCFYQDFE 145


>AF241834-1|AAF64492.1|  343|Drosophila melanogaster secretory
           carrier membrane protein protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/77 (25%), Positives = 29/77 (37%)
 Frame = +2

Query: 20  QGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQK 199
           Q IP       GA      +    + +L R  EEL  +   LD  +  +QG   +  +  
Sbjct: 70  QNIPPPQTSSLGASAPSTSIQI-TSEELQRRQEELDRKAAELDRREQQLQGNVPQLNNWP 128

Query: 200 DLATKICEKPQIVNDYE 250
            L    C KP    D+E
Sbjct: 129 PLPDNFCVKPCFYQDFE 145


>AF224720-1|AAF35367.1|  343|Drosophila melanogaster secretory
           carrier membrane protein protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/77 (25%), Positives = 29/77 (37%)
 Frame = +2

Query: 20  QGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQK 199
           Q IP       GA      +    + +L R  EEL  +   LD  +  +QG   +  +  
Sbjct: 70  QNIPPPQTSSLGASAPSTSIQI-TSEELQRRQEELDRKAAELDRREQQLQGNVPQLNNWP 128

Query: 200 DLATKICEKPQIVNDYE 250
            L    C KP    D+E
Sbjct: 129 PLPDNFCVKPCFYQDFE 145


>AE014298-2146|AAF48452.1|  343|Drosophila melanogaster CG9195-PA,
           isoform A protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/77 (25%), Positives = 29/77 (37%)
 Frame = +2

Query: 20  QGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQK 199
           Q IP       GA      +    + +L R  EEL  +   LD  +  +QG   +  +  
Sbjct: 70  QNIPPPQTSSLGASAPSTSIQI-TSEELQRRQEELDRKAAELDRREQQLQGNVPQLNNWP 128

Query: 200 DLATKICEKPQIVNDYE 250
            L    C KP    D+E
Sbjct: 129 PLPDNFCVKPCFYQDFE 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,558,946
Number of Sequences: 53049
Number of extensions: 279632
Number of successful extensions: 662
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)