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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d06r
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W1F5 Cluster: CG3803-PA; n=5; Endopterygota|Rep: CG38...   206   6e-52
UniRef50_UPI00015B48FD Cluster: PREDICTED: similar to ENSANGP000...   177   2e-43
UniRef50_UPI000058454A Cluster: PREDICTED: similar to cytochrome...   168   1e-40
UniRef50_Q7KZN9 Cluster: Cytochrome c oxidase assembly protein C...   166   6e-40
UniRef50_Q22251 Cluster: Putative uncharacterized protein; n=2; ...   148   2e-34
UniRef50_O76740 Cluster: Cytochrome c oxidase assembly protein; ...   146   7e-34
UniRef50_Q9FKT8 Cluster: Similarity to cytochrome oxidase assemb...   140   3e-32
UniRef50_Q5K7Z7 Cluster: Cytochrome c oxidase biogenesis-related...   112   1e-23
UniRef50_Q5D9X3 Cluster: SJCHGC06866 protein; n=1; Schistosoma j...   109   1e-22
UniRef50_Q6C0H5 Cluster: Yarrowia lipolytica chromosome F of str...   100   8e-20
UniRef50_Q82X64 Cluster: Cytochrome oxidase assembly; n=4; Prote...    90   6e-17
UniRef50_A2QVS0 Cluster: Contig An11c0080, complete genome; n=2;...    88   2e-16
UniRef50_A4AD07 Cluster: Cytochrome oxidase assembly protein; n=...    85   2e-15
UniRef50_A5DKK4 Cluster: Putative uncharacterized protein; n=1; ...    83   6e-15
UniRef50_A1CT55 Cluster: Cytochrome C oxidase assembly protein c...    83   6e-15
UniRef50_P40086 Cluster: Cytochrome c oxidase assembly protein C...    79   2e-13
UniRef50_A5Y0M4 Cluster: Putative cytochrome c oxidase assembly ...    77   5e-13
UniRef50_Q4Q7Z4 Cluster: Cytochrome oxidase assembly protein-lik...    75   1e-12
UniRef50_UPI00006CA44C Cluster: Cytochrome oxidase assembly prot...    75   2e-12
UniRef50_Q8G1D1 Cluster: Cytochrome c oxidase assembly protein, ...    74   4e-12
UniRef50_Q10361 Cluster: Electron transfer protein 1, mitochondr...    74   4e-12
UniRef50_Q5UF25 Cluster: Cytochrome c oxidase assembly protein, ...    73   6e-12
UniRef50_Q4ECP5 Cluster: Cytochrome c oxidase assembly protein; ...    73   6e-12
UniRef50_A0CRQ7 Cluster: Chromosome undetermined scaffold_25, wh...    73   8e-12
UniRef50_Q4UKQ2 Cluster: Cytochrome c oxidase assembly protein; ...    72   1e-11
UniRef50_A7AML1 Cluster: Cytochrome c oxidase assembly protein, ...    72   2e-11
UniRef50_Q6N660 Cluster: Possible cytochrome c oxidase assembly ...    71   4e-11
UniRef50_Q5DHU8 Cluster: SJCHGC09297 protein; n=1; Schistosoma j...    71   4e-11
UniRef50_Q2W552 Cluster: Uncharacterized protein required for cy...    70   5e-11
UniRef50_A5FXV4 Cluster: Cytochrome oxidase assembly; n=1; Acidi...    69   1e-10
UniRef50_A3K259 Cluster: Cytochrome oxidase assembly; n=1; Sagit...    66   9e-10
UniRef50_Q0BQ20 Cluster: Heme O monooxygenase; n=1; Granulibacte...    66   1e-09
UniRef50_Q89KD9 Cluster: Cytochrome oxidase assembly factor; n=3...    65   2e-09
UniRef50_A5NUF6 Cluster: Cytochrome oxidase assembly; n=2; Alpha...    65   2e-09
UniRef50_A5FA69 Cluster: Cytochrome oxidase assembly precursor; ...    65   2e-09
UniRef50_Q4MZC9 Cluster: Cytochrome c oxidase assembly protein, ...    65   2e-09
UniRef50_A5CF77 Cluster: Cytochrome c oxidase assembly protein; ...    63   8e-09
UniRef50_Q4P0H1 Cluster: Putative uncharacterized protein; n=1; ...    63   8e-09
UniRef50_Q5FG54 Cluster: Cytochrome C oxidase assembly protein; ...    62   2e-08
UniRef50_Q7RLI6 Cluster: Cytochrome c oxidase assembly protein; ...    62   2e-08
UniRef50_A7DDH6 Cluster: Cytochrome oxidase assembly; n=2; Methy...    60   6e-08
UniRef50_Q5PBP7 Cluster: Cytochrome C oxidase assembly protein; ...    58   2e-07
UniRef50_Q9A8H9 Cluster: Cytochrome c oxidase assembly protein, ...    58   3e-07
UniRef50_UPI0000E2263C Cluster: PREDICTED: similar to Cox15 prot...    56   7e-07
UniRef50_A3UCD7 Cluster: Cytochrome oxidase assembly; n=2; Hypho...    56   1e-06
UniRef50_Q4FLV1 Cluster: Cytochrome c oxidase assembly protein; ...    52   2e-05
UniRef50_A5FXV3 Cluster: Cytochrome oxidase assembly; n=1; Acidi...    52   2e-05
UniRef50_A3VUY2 Cluster: Cytochrome oxidase assembly factor; n=1...    52   2e-05
UniRef50_Q1GWK6 Cluster: Cytochrome oxidase assembly precursor; ...    51   3e-05
UniRef50_Q0BZT0 Cluster: Cytochrome c oxidase assembly protein; ...    48   3e-04
UniRef50_Q2GCS4 Cluster: Putative cytochrome oxidase assembly pr...    46   0.001
UniRef50_Q1NBL9 Cluster: Cytochrome oxidase assembly; n=4; Sphin...    46   0.001
UniRef50_Q66LN8 Cluster: Heme A synthase; n=26; Alphaproteobacte...    43   0.007
UniRef50_A3JBB5 Cluster: Cytochrome oxidase assembly protein; n=...    37   0.63 
UniRef50_Q10G34 Cluster: Putative uncharacterized protein; n=2; ...    36   1.4  
UniRef50_A7TGF4 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_A5GCT2 Cluster: Cytochrome oxidase assembly precursor; ...    34   4.4  
UniRef50_A1JIL2 Cluster: Putative membrane transport protein ATP...    33   5.8  
UniRef50_Q9C056 Cluster: Homeobox protein Nkx-6.2; n=27; Bilater...    33   5.8  
UniRef50_A7QGI3 Cluster: Chromosome undetermined scaffold_92, wh...    33   7.7  
UniRef50_Q4P3S6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q9W1F5 Cluster: CG3803-PA; n=5; Endopterygota|Rep:
           CG3803-PA - Drosophila melanogaster (Fruit fly)
          Length = 393

 Score =  206 bits (502), Expect = 6e-52
 Identities = 104/211 (49%), Positives = 125/211 (59%)
 Frame = -2

Query: 731 EDRFHGPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITG 552
           EDRF  P+DVPRVSQYRLA+HL+                L   P    + + K+  +I G
Sbjct: 185 EDRFQDPNDVPRVSQYRLASHLAAAFVLYSLSLSKAMSLL--IPTNTFVIQAKKAFNIKG 242

Query: 551 LAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTV 372
           L H  KAM  +TA+SGAFVAGLDAGLVYNSFPKMGD W+PDD+  F+P  KN TENPTTV
Sbjct: 243 LTHLTKAMVLLTAISGAFVAGLDAGLVYNSFPKMGDKWIPDDMWTFAPIQKNITENPTTV 302

Query: 371 QFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTA 192
           QF+HR+LG                                       LGV TLL YVP  
Sbjct: 303 QFNHRILGISTVTLTTALWLVTRRMQLPKRANWAINAVVAMAWTQATLGVTTLLNYVPVP 362

Query: 191 LAASHQAGSLVLLSLAVWLTHEVKLLKYIPK 99
           LA +HQ+GSL+LLS A+WL+HEV+LLKY+PK
Sbjct: 363 LATAHQSGSLILLSFALWLSHEVRLLKYLPK 393


>UniRef50_UPI00015B48FD Cluster: PREDICTED: similar to
           ENSANGP00000013266; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000013266 - Nasonia
           vitripennis
          Length = 399

 Score =  177 bits (431), Expect = 2e-43
 Identities = 98/218 (44%), Positives = 118/218 (54%), Gaps = 7/218 (3%)
 Frame = -2

Query: 731 EDRFHGPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITG 552
           E+RF GP+DVPRVSQYRLAAHL                 L P  +        ELK    
Sbjct: 182 ENRFDGPTDVPRVSQYRLAAHLGLAIFIYSGLLYTTLDQLIPVRSNTNNYNTSELKPTIK 241

Query: 551 -------LAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNF 393
                  LA + K + F+TA+SGAFVAGLDAGL+YN+FPKM + W+PDDIL  SP  KN 
Sbjct: 242 YNNRFRILAFSSKGLIFLTALSGAFVAGLDAGLIYNTFPKMCNKWIPDDILFMSPLYKNL 301

Query: 392 TENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATL 213
           TENPTTVQF+HR LG                                       LG+ TL
Sbjct: 302 TENPTTVQFNHRTLGMSTLLAVSAISWMSRKCNLPRRASTAVIVLTCAAYTQAILGIFTL 361

Query: 212 LCYVPTALAASHQAGSLVLLSLAVWLTHEVKLLKYIPK 99
           L +VPT LAA HQ+GSL+LLS A+WL HE+K +K + K
Sbjct: 362 LNHVPTYLAALHQSGSLLLLSSAIWLCHEIKYIKKLAK 399


>UniRef50_UPI000058454A Cluster: PREDICTED: similar to cytochrome
           oxidase assembly factor; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to cytochrome oxidase
           assembly factor - Strongylocentrotus purpuratus
          Length = 435

 Score =  168 bits (408), Expect = 1e-40
 Identities = 95/204 (46%), Positives = 112/204 (54%), Gaps = 1/204 (0%)
 Frame = -2

Query: 707 DVPRVSQYRLAAHL-SXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKA 531
           D+PRVSQYRLAAHL S                L+P     T+   K L  +   AH   A
Sbjct: 239 DIPRVSQYRLAAHLGSAFVLYSLMLWGGLSQILKPL----TIANSKNLSLLRKCAHGSMA 294

Query: 530 MTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVL 351
           + F TA+SGAFVAGLDAGLVYNSFPKM D W+P+DI+A  P  KN  ENPTTVQFDHR+L
Sbjct: 295 IIFTTAMSGAFVAGLDAGLVYNSFPKMADKWIPEDIMAHDPKYKNVFENPTTVQFDHRIL 354

Query: 350 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQA 171
           G                                       LG+ TLL +VPT+LAA+HQ+
Sbjct: 355 GTTTGATVAGLWLLARRVPLPSRARLAVNCMVGMVGVQITLGICTLLYFVPTSLAAAHQS 414

Query: 170 GSLVLLSLAVWLTHEVKLLKYIPK 99
           GSL LLSLA+W  HE   L+ IPK
Sbjct: 415 GSLTLLSLALWFAHE---LRRIPK 435


>UniRef50_Q7KZN9 Cluster: Cytochrome c oxidase assembly protein
           COX15 homolog; n=23; Eumetazoa|Rep: Cytochrome c oxidase
           assembly protein COX15 homolog - Homo sapiens (Human)
          Length = 410

 Score =  166 bits (403), Expect = 6e-40
 Identities = 88/203 (43%), Positives = 112/203 (55%)
 Frame = -2

Query: 707 DVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAM 528
           D+PRVSQYRLAAHL                 L P      L +  +L  +   AH    +
Sbjct: 214 DIPRVSQYRLAAHLGSALVLYCASLWTSLSLLLP---PHKLPETHQLLQLRRFAHGTAGL 270

Query: 527 TFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLG 348
            F+TA+SGAFVAGLDAGLVYNSFPKMG++W+P+D+  FSP ++N  ENPT VQFDHR+LG
Sbjct: 271 VFLTALSGAFVAGLDAGLVYNSFPKMGESWIPEDLFTFSPILRNVFENPTMVQFDHRILG 330

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAG 168
                                                  LG++TLL YVPT LAA+HQ+G
Sbjct: 331 ITSVTAITVLYFLSRRIPLPRRTKMAAVTLLALAYTQVGLGISTLLMYVPTPLAATHQSG 390

Query: 167 SLVLLSLAVWLTHEVKLLKYIPK 99
           SL LL+ A+WL +E   L+ +PK
Sbjct: 391 SLALLTGALWLMNE---LRRVPK 410


>UniRef50_Q22251 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 395

 Score =  148 bits (358), Expect = 2e-34
 Identities = 83/200 (41%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
 Frame = -2

Query: 710 SDVPRVSQYRLAAHLSXXXXXXXXXX-XXXXXXLRPFPAAATLQKIKELKSITGLAHAVK 534
           SDVPRVSQYRLA HL+                 ++P   +    K+  L+   G+ H  K
Sbjct: 197 SDVPRVSQYRLATHLTMAFVLYSIFFWNGLSHLVKPHDLSKVRSKLGALR---GMTHGSK 253

Query: 533 AMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRV 354
            M F TA+ GAFVAGLDAGLVYNS+PK  +NW+P+++L+ SPT KNF EN  TVQF HR 
Sbjct: 254 LMVFSTAIMGAFVAGLDAGLVYNSWPKFAENWIPENMLSRSPTWKNFFENDVTVQFVHRN 313

Query: 353 LGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQ 174
           L                                        LGV TL+ YVP  LAA HQ
Sbjct: 314 LAYLTVISVLSTFLIGRRAPIPKRTRMALNLTVAAVFGQAALGVFTLINYVPVWLAACHQ 373

Query: 173 AGSLVLLSLAVWLTHEVKLL 114
           +GS+ LLS  +WL+HE++ L
Sbjct: 374 SGSMALLSSVLWLSHELRRL 393


>UniRef50_O76740 Cluster: Cytochrome c oxidase assembly protein;
           n=2; Dictyostelium discoideum|Rep: Cytochrome c oxidase
           assembly protein - Dictyostelium discoideum (Slime mold)
          Length = 482

 Score =  146 bits (353), Expect = 7e-34
 Identities = 86/217 (39%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
 Frame = -2

Query: 710 SDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAA-ATLQKIKE------------ 570
           SD+PRVSQYRLAAHL                 +RP   + A +QK+K             
Sbjct: 264 SDIPRVSQYRLAAHLGSAFVIYMALLWFGLGLVRPSALSPAMMQKLKSAMSTLAQQKSSF 323

Query: 569 -LKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDIL--AFSPTIK 399
            ++ +   +H V  + F+TA+SGAFVAGLDAGLVYN+FPKMG  W+PDDI+     P  K
Sbjct: 324 TIEKMKKYSHQVSGLIFLTAMSGAFVAGLDAGLVYNTFPKMGHQWIPDDIINPKIKPAYK 383

Query: 398 NFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXLG 225
           N  E+  TVQF HRVL                                          LG
Sbjct: 384 NMFEHDVTVQFQHRVLATITYGSILALSAFAYRGRLALSPKARLATNCLLAVGTAQVALG 443

Query: 224 VATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVKLL 114
           + TLL +VP +L A+HQ GSL LLS+A+WL HE+K L
Sbjct: 444 ITTLLTFVPVSLGAAHQTGSLTLLSVAIWLLHELKKL 480


>UniRef50_Q9FKT8 Cluster: Similarity to cytochrome oxidase assembly
           factor; n=8; Viridiplantae|Rep: Similarity to cytochrome
           oxidase assembly factor - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 457

 Score =  140 bits (339), Expect = 3e-32
 Identities = 78/206 (37%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTF 522
           PRVS YRLAAHL+                + P P A +L  ++    +  LA  V  +  
Sbjct: 245 PRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLAWVRGAAKVKKLALPVSLIVG 304

Query: 521 ITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXX 342
           ITA+SGAFVAG DAG  +N+FPKMGD W+PD+I    P ++NF EN  TVQ DHR+L   
Sbjct: 305 ITAISGAFVAGNDAGRAFNTFPKMGDTWIPDNIFEMKPLLRNFFENTATVQLDHRLLATT 364

Query: 341 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSL 162
                                                LGV+TLL YVP +L ++HQAG+L
Sbjct: 365 TLIAIGTMWWFTRKLDIHPAVKALIGSTVGMTAVQVTLGVSTLLSYVPVSLGSAHQAGAL 424

Query: 161 VLLSLAVWLTHEVK-----LLKYIPK 99
            LL+L + L H ++     LLK +P+
Sbjct: 425 TLLTLMLLLNHTLRRPSPSLLKSLPQ 450


>UniRef50_Q5K7Z7 Cluster: Cytochrome c oxidase biogenesis-related
           protein, putative; n=1; Filobasidiella neoformans|Rep:
           Cytochrome c oxidase biogenesis-related protein,
           putative - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 452

 Score =  112 bits (269), Expect = 1e-23
 Identities = 77/201 (38%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
 Frame = -2

Query: 710 SDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPF-----PAAATLQKIKELKSITGLA 546
           + VPRVSQYRLAAH S                 R       PA  +   I  +K   GL 
Sbjct: 231 NSVPRVSQYRLAAHYSAAVALYLGMLSTAIGIQRDMKLAKNPAIVSALNIPAVKKFRGLV 290

Query: 545 HAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLP------DDILAFSPTIK---NF 393
           H    M  +TAV+GAFVAGLDAGLVYN FP MGD  +P      D   A S + K   N 
Sbjct: 291 HLSGMMVALTAVTGAFVAGLDAGLVYNEFPMMGDGLVPPKDELFDQRYARSGSDKIWRNM 350

Query: 392 TENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATL 213
            ENP T QFDHRVL                                        LG++TL
Sbjct: 351 LENPVTAQFDHRVL-ATTTFTILCTLPFAARRLPFPAARRLAALTTAAAVTQVTLGISTL 409

Query: 212 LCYVPTALAASHQAGSLVLLS 150
           L  VP +LA+ HQ GS+VLL+
Sbjct: 410 LYLVPISLASMHQTGSVVLLT 430


>UniRef50_Q5D9X3 Cluster: SJCHGC06866 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06866 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 221

 Score =  109 bits (261), Expect = 1e-22
 Identities = 55/120 (45%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
 Frame = -2

Query: 704 VPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMT 525
           VPRV  Y L AHL                 L   P       +K+LK+   L H  KA+T
Sbjct: 88  VPRVDHYWLCAHLISAIVLYSLLLWNSFSHLASHPEVKPFNGVKQLKA---LGHTGKALT 144

Query: 524 FITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILA--FSPTIKNFTENPTTVQFDHRVL 351
             T + GAFVAGLDAGL+YNS+PKM D W+PDD++   +  T+KNF +NPT VQF HR+L
Sbjct: 145 LATIIYGAFVAGLDAGLIYNSWPKMADRWIPDDLIVSRYGSTVKNFLDNPTAVQFTHRML 204


>UniRef50_Q6C0H5 Cluster: Yarrowia lipolytica chromosome F of strain
           CLIB122 of Yarrowia lipolytica; n=3; Ascomycota|Rep:
           Yarrowia lipolytica chromosome F of strain CLIB122 of
           Yarrowia lipolytica - Yarrowia lipolytica (Candida
           lipolytica)
          Length = 515

 Score = 99.5 bits (237), Expect = 8e-20
 Identities = 74/216 (34%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXLR-------PFPAAATLQKIKE--LKSITGL 549
           PRVS YRLA HL                 LR       P  A A   K+    LK     
Sbjct: 258 PRVSPYRLATHLGAAFVLYWAMLSTGVQVLRESRWIANPSSAVADFAKLNNPILKPFKRY 317

Query: 548 AHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI----------- 402
                 + F+TA+SGAFVAGLDAG++YN+FP MG+  +P       P             
Sbjct: 318 TTVFCGLVFLTAMSGAFVAGLDAGMIYNTFPFMGEGIVPPKTELMDPLFAQKNDKSDLWW 377

Query: 401 KNFTENPTTVQFDHRVLGXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 228
           +N  ENP TVQFDHRVL                                          L
Sbjct: 378 RNIFENPVTVQFDHRVLATTTFCASFALLLMSNRFKPFLPRKAFLACHSIMGIAMVQVTL 437

Query: 227 GVATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVK 120
           G++TL+  VPT LAA+HQAG+L LLS A +L  ++K
Sbjct: 438 GISTLIYLVPTPLAAAHQAGALALLSAAAYLGAQLK 473


>UniRef50_Q82X64 Cluster: Cytochrome oxidase assembly; n=4;
           Proteobacteria|Rep: Cytochrome oxidase assembly -
           Nitrosomonas europaea
          Length = 359

 Score = 89.8 bits (213), Expect = 6e-17
 Identities = 56/198 (28%), Positives = 83/198 (41%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G +D   VSQYRL AHL                 L P    +       ++ +   A  +
Sbjct: 163 GLADNVYVSQYRLTAHLGLAFIIYAAMFWVATGLLSPVNTHSA--DPASVRKLGRFARIL 220

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHR 357
             + F   +SG  VAG+ AG  YN+FP M   ++P  +    P  +NF +N TTVQFDHR
Sbjct: 221 TGLIFFMVLSGGLVAGIHAGKAYNTFPLMDGFFIPPALFVLEPWYRNFFDNITTVQFDHR 280

Query: 356 VLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASH 177
           ++                                        LG+ TLL  VP   AA+H
Sbjct: 281 MIAWLLMFTIPLFWFKARQLSLSWSGRLACHLLLIMLCTQVALGITTLLLSVPLTFAAAH 340

Query: 176 QAGSLVLLSLAVWLTHEV 123
           QAG+++L + A+W+  ++
Sbjct: 341 QAGAVLLFTAALWVCRKL 358


>UniRef50_A2QVS0 Cluster: Contig An11c0080, complete genome; n=2;
           Pezizomycotina|Rep: Contig An11c0080, complete genome -
           Aspergillus niger
          Length = 505

 Score = 88.2 bits (209), Expect = 2e-16
 Identities = 71/219 (32%), Positives = 88/219 (40%), Gaps = 25/219 (11%)
 Frame = -2

Query: 731 EDRFHGPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLR-------PFPAAATLQKIK 573
           +D    P   PRVSQYRL AHL                 LR       P      L  ++
Sbjct: 246 KDDLFAPGSHPRVSQYRLTAHLGAAFVCYTAMLWNGLAILRSHRLLADPEAGIKLLDALR 305

Query: 572 E--LKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI- 402
           +  LK       A+ A+ F+TA+SGA VAGLDAGL+YN FP MG+   P     F     
Sbjct: 306 DPKLKIFRRSVAALAALVFVTAMSGALVAGLDAGLIYNEFPFMGNGLAPPKSELFDERYS 365

Query: 401 ----------KNFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXX-----XXXXXX 267
                     +N  ENP+ VQ DHR L                                 
Sbjct: 366 RHEDRSDLWWRNMLENPSLVQLDHRALAITTFTSIMALLAYTRGSPTMKRLLPPAAKKGV 425

Query: 266 XXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLVLLS 150
                       LG++TLL  VPT LA++HQAGSL LL+
Sbjct: 426 HGVVAFACMQVGLGISTLLYLVPTPLASAHQAGSLFLLT 464


>UniRef50_A4AD07 Cluster: Cytochrome oxidase assembly protein; n=2;
           unclassified Gammaproteobacteria|Rep: Cytochrome oxidase
           assembly protein - Congregibacter litoralis KT71
          Length = 356

 Score = 85.0 bits (201), Expect = 2e-15
 Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 3/199 (1%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAH-- 543
           G  D P VSQYRL AHL                    +P A    K     S+ G+A   
Sbjct: 150 GLVDRPSVSQYRLTAHLGLAVALYAAILWQFLNL---WPKAGRRSKSSSTASLAGVARWS 206

Query: 542 -AVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQF 366
             +  + ++  +SG  VAG DAG  Y ++PKMG  ++P  + A +P+     E+ TT+QF
Sbjct: 207 PLLVVLVYLMILSGGLVAGTDAGYAYPTWPKMGPGFVPPGLYAATPSWLAAFEDVTTIQF 266

Query: 365 DHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALA 186
           +HR+                                         LG+ TLL  +   +A
Sbjct: 267 NHRLFAYLLFFLVGGFGLFLALKASGTALRLAGGAVMAALLLQITLGIGTLLTRMAIPVA 326

Query: 185 ASHQAGSLVLLSLAVWLTH 129
           A HQAG+++LL++ ++  H
Sbjct: 327 AGHQAGAILLLTVLLFTVH 345


>UniRef50_A5DKK4 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 495

 Score = 83.4 bits (197), Expect = 6e-15
 Identities = 53/144 (36%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
 Frame = -2

Query: 542 AVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI-----------KN 396
           A+  +TFITA+SG  VAGLDAGL+YN+FP MGD++LP      SP             +N
Sbjct: 322 ALLGLTFITALSGGMVAGLDAGLIYNTFPHMGDDYLPSSGELMSPVYARKEDLSDLWWRN 381

Query: 395 FTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXLGV 222
             ENPTTVQ  HR+                                           LG+
Sbjct: 382 LLENPTTVQLVHRIFATTTFFSILAAHMFVIKRKQYIPKPAQRALHGMMGLVLLQVSLGI 441

Query: 221 ATLLCYVPTALAASHQAGSLVLLS 150
            TL+  VP  LAA+HQAG+L LL+
Sbjct: 442 TTLIYLVPIPLAAAHQAGALALLT 465


>UniRef50_A1CT55 Cluster: Cytochrome C oxidase assembly protein
           cox15; n=13; Pezizomycotina|Rep: Cytochrome C oxidase
           assembly protein cox15 - Aspergillus clavatus
          Length = 503

 Score = 83.4 bits (197), Expect = 6e-15
 Identities = 74/223 (33%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
 Frame = -2

Query: 731 EDRFHGPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPF-----PAAAT--LQKIK 573
           ED F   S  PRVSQYRL AHL+                LR       P A T  L  ++
Sbjct: 245 EDLFAQGSH-PRVSQYRLTAHLAAAFVCYTAMLWNGLAILRSHRLLADPEAGTKVLDALR 303

Query: 572 ELK------SITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFS 411
           + K      S+ GLA     +TF+T +SG  VAGLDAGL+YN FP MG+   P     F 
Sbjct: 304 DPKLNIFRRSVAGLA----LLTFVTVMSGGLVAGLDAGLIYNEFPFMGNGLTPPKAELFD 359

Query: 410 PTI-----------KNFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXX-----XX 279
           P             +N  ENP+ VQ DHR++                             
Sbjct: 360 PRYSRHEDRSDLWWRNMLENPSLVQLDHRIMAMTTFTSIMALWAYTRRSPTMKRLLPPAA 419

Query: 278 XXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLVLLS 150
                           LG++TLL  VP  LA++HQAGSL LL+
Sbjct: 420 KKGVHGVVAFACVQVSLGISTLLYLVPLPLASAHQAGSLCLLT 462


>UniRef50_P40086 Cluster: Cytochrome c oxidase assembly protein
           COX15; n=10; Saccharomycetales|Rep: Cytochrome c oxidase
           assembly protein COX15 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 486

 Score = 78.6 bits (185), Expect = 2e-13
 Identities = 61/216 (28%), Positives = 88/216 (40%), Gaps = 22/216 (10%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXLR-------PFPAAATLQKIKE--LKSITGL 549
           P VSQYRL  HL                 LR       P  A +  +K+    +  +  +
Sbjct: 235 PTVSQYRLTTHLGTAFFLYMGMLWTGLEILRECKWIKNPVQAISLFKKLDNPAIGPMRKI 294

Query: 548 AHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI----------- 402
           + A+ A++F+TA+SG  VAGLDAG VYN++PKMG+ W P                     
Sbjct: 295 SLALLAVSFLTAMSGGMVAGLDAGWVYNTWPKMGERWFPSSRELMDENFCRREDKKDLWW 354

Query: 401 KNFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXL 228
           +N  ENP TVQ  HR                                            L
Sbjct: 355 RNLLENPVTVQLVHRTCAYVAFTSVLAAHMYAIKKKAVIPRNAMTSLHVMMGVVTLQATL 414

Query: 227 GVATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVK 120
           G+ T+L  VP +LA+ HQAG+L LL+ ++    +++
Sbjct: 415 GILTILYLVPISLASIHQAGALALLTSSLVFASQLR 450


>UniRef50_A5Y0M4 Cluster: Putative cytochrome c oxidase assembly
           protein; n=1; Starmerella bombicola|Rep: Putative
           cytochrome c oxidase assembly protein - Starmerella
           bombicola
          Length = 485

 Score = 77.0 bits (181), Expect = 5e-13
 Identities = 66/219 (30%), Positives = 89/219 (40%), Gaps = 24/219 (10%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXLR-------PFPAAATLQKIKELKSI--TGL 549
           PRVS YRLA HL                 LR       P  A +TL  +    +      
Sbjct: 252 PRVSHYRLATHLGAAFLLYMAMTMTGLGILRQHRFMKDPVKAMSTLTVLSSPLATWPRRF 311

Query: 548 AHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAF--------SPT---- 405
           + A+  + F+T++SG+FVAGLDAGL+YNSFP MG    P     F        +P+    
Sbjct: 312 SIALLCLGFLTSMSGSFVAGLDAGLLYNSFPMMGLGLTPSSSELFDKRYTGEQNPSAWTL 371

Query: 404 -IKNFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXX 234
             KN  +NP TVQ  HR+L                                         
Sbjct: 372 FYKNVLDNPVTVQLTHRILAVSTWTATLAFLLYATKRKSLLPIKVYKGAHGVFGFATLQA 431

Query: 233 XLGVATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVKL 117
            LG+ TL+  VP   AA HQAG+L  L+  + L + ++L
Sbjct: 432 ALGITTLVYVVPIETAALHQAGALAFLTSILILVNRLRL 470


>UniRef50_Q4Q7Z4 Cluster: Cytochrome oxidase assembly protein-like
           protein; n=5; Trypanosomatidae|Rep: Cytochrome oxidase
           assembly protein-like protein - Leishmania major
          Length = 415

 Score = 75.4 bits (177), Expect = 1e-12
 Identities = 59/190 (31%), Positives = 81/190 (42%), Gaps = 5/190 (2%)
 Frame = -2

Query: 695 VSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 516
           VS YRLAAHL                     P  A   ++ +++    ++ A   M F+T
Sbjct: 217 VSAYRLAAHLILAFTIYSFMLRMGYGLK--LPVMAPFPRMAKVQLWLRMSFA---MMFVT 271

Query: 515 AVSGAFVAGLDAGLVYN-SFPKMGDNWLP--DDILAFSPTIKNFTENPTTVQFDHRVLGX 345
           A+SGAFVAGLDAGL+YN  FP M     P  D + A  PT +NF EN + VQ  HRV+  
Sbjct: 272 AISGAFVAGLDAGLLYNDDFPWMAGGVFPPADHLFALEPTWRNFFENHSMVQTTHRVMAG 331

Query: 344 XXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQA 171
                                                   LG+ T++  V   +A SHQ 
Sbjct: 332 ATFLTITGLNVAASRRRGFIPPPVFRNLMFVNTALLFQVSLGMWTVMSTVYVPVAVSHQM 391

Query: 170 GSLVLLSLAV 141
           G+L+LL+  +
Sbjct: 392 GALILLTTLI 401


>UniRef50_UPI00006CA44C Cluster: Cytochrome oxidase assembly
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           Cytochrome oxidase assembly protein - Tetrahymena
           thermophila SB210
          Length = 447

 Score = 74.9 bits (176), Expect = 2e-12
 Identities = 50/195 (25%), Positives = 76/195 (38%), Gaps = 1/195 (0%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXLR-PFPAAATLQKIKELKSITGLAHAVKAMT 525
           PRVS YRL  HL+                +R P   A  L  +   K++ GL   +    
Sbjct: 233 PRVSVYRLFTHLNMAIVLYGALLWNGLTLIRKPQQQALQLSHLAGTKTMRGLGIGLLHFV 292

Query: 524 FITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGX 345
            +  +SGA VAG+DAG  +N++P M    +PD ++   P   NF EN   VQF+HR    
Sbjct: 293 ALNIMSGAIVAGIDAGKGFNTWPDMNGQMIPDGLMKRDPWYLNFFENRVLVQFNHRNCAY 352

Query: 344 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGS 165
                                                  G+  LL   P   ++ HQA +
Sbjct: 353 LTASWTGYMLYKSLSLNLAKHQRFQIGLLSFFILYQIASGITVLLHGAPPKESSGHQATA 412

Query: 164 LVLLSLAVWLTHEVK 120
           L+ +++A+   H  +
Sbjct: 413 LMTVTVALLTCHSFR 427


>UniRef50_Q8G1D1 Cluster: Cytochrome c oxidase assembly protein,
           putative; n=20; Alphaproteobacteria|Rep: Cytochrome c
           oxidase assembly protein, putative - Brucella suis
          Length = 358

 Score = 73.7 bits (173), Expect = 4e-12
 Identities = 54/192 (28%), Positives = 74/192 (38%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G S++  VSQYRLA HL+                        T  +    +SI   A  +
Sbjct: 162 GLSELTSVSQYRLAIHLTTACVIITAVFYIAR-------GLVTYSERPAERSIQRFAGWI 214

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHR 357
                +    G  VAGL AGL YN++P M    +P D+   +P  +N  ENP TVQF HR
Sbjct: 215 VFAVLVQIYLGGLVAGLHAGLTYNTWPLMDGAIIPSDLFTQAPWWRNLFENPKTVQFVHR 274

Query: 356 VLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASH 177
           +                                         +G+ATLL   P  L  +H
Sbjct: 275 MFAYTVLLLAILHAVQVWKNAPGTTHARRTIVLVGLVFIQAMIGIATLLMSAPLHLGLTH 334

Query: 176 QAGSLVLLSLAV 141
           Q  +LV+L+ AV
Sbjct: 335 QFFALVVLAFAV 346


>UniRef50_Q10361 Cluster: Electron transfer protein 1, mitochondrial
           precursor; n=22; cellular organisms|Rep: Electron
           transfer protein 1, mitochondrial precursor -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 631

 Score = 73.7 bits (173), Expect = 4e-12
 Identities = 62/219 (28%), Positives = 89/219 (40%), Gaps = 26/219 (11%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXX------XXXXXXXXXXXLRPFPAAATLQ------KIKELKSI 558
           PRVS YRLA HL+                      L+   + +T Q       ++++K  
Sbjct: 246 PRVSHYRLATHLAAAVALYIGLVWTGHGILQRHAFLKSMKSGSTSQLTSMVSSVQKMKGF 305

Query: 557 TGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWL-PDDILAFSPTI------- 402
               ++   +  IT +SGAFVAGLDAG++Y +FP+MG+  L P     F           
Sbjct: 306 RTSVNSFVGLVLITLLSGAFVAGLDAGMIYCTFPEMGEGRLAPSKSELFDQRFCRKDDKS 365

Query: 401 ----KNFTENPTTVQFDHRVLGXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
               +N  +NP+ VQ +HR+L                                       
Sbjct: 366 DLIWRNMIDNPSLVQLEHRILAITTFVAACGLFIFSRAKRNILPKKIKTSINVVTGVVTA 425

Query: 239 XXXLGVATLLCYVPTALAASHQAGSLVLLSLAVWLTHEV 123
              LG+ TL+  VP  LAA HQAGSLV L+ A+ L   +
Sbjct: 426 QATLGIMTLIYVVPVPLAALHQAGSLVTLTAALSLAQRL 464


>UniRef50_Q5UF25 Cluster: Cytochrome c oxidase assembly protein,
           putative; n=1; uncultured alpha proteobacterium
           EBAC2C11|Rep: Cytochrome c oxidase assembly protein,
           putative - uncultured alpha proteobacterium EBAC2C11
          Length = 354

 Score = 73.3 bits (172), Expect = 6e-12
 Identities = 61/196 (31%), Positives = 80/196 (40%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G ++   VSQYRLA HLS                   F       +       TG   A 
Sbjct: 158 GLTETASVSQYRLATHLSLALIIFSLLVWTG------FDLRDGCDRYP-----TGQGLAT 206

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHR 357
             +  IT V+GA VAG+DAGL+YN +P MGD+ LP +    +  +  F ENP + QF HR
Sbjct: 207 LILLGITIVAGALVAGMDAGLLYNEYPLMGDSLLPIE-YGEAGWLDPF-ENPASAQFHHR 264

Query: 356 VLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASH 177
            LG                                       LG+ TLL  VP +L   H
Sbjct: 265 WLG----ALTFAAVIVLGLKERSASSAFRSNLVVAAVSLQFTLGIVTLLHGVPVSLGGMH 320

Query: 176 QAGSLVLLSLAVWLTH 129
           QAG+++LL   + L H
Sbjct: 321 QAGAVILLGCLLALLH 336


>UniRef50_Q4ECP5 Cluster: Cytochrome c oxidase assembly protein;
           n=5; Wolbachia|Rep: Cytochrome c oxidase assembly
           protein - Wolbachia endosymbiont of Drosophila ananassae
          Length = 350

 Score = 73.3 bits (172), Expect = 6e-12
 Identities = 54/188 (28%), Positives = 74/188 (39%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTF 522
           P VS YRLA HL                    +       K+K   +    A  +  +  
Sbjct: 155 PHVSHYRLALHLLLALVIFALLSYQFFD----YQIRPQQTKLKVSGNTIYYARMILVLIV 210

Query: 521 ITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXX 342
           I  + GAFVAGL+AGL+YN+FP M    +P+D+    P   N  EN  TVQF HR L   
Sbjct: 211 IQIIFGAFVAGLNAGLIYNTFPLMDGQIVPEDLFFLQPIWLNIFENRATVQFIHRAL--- 267

Query: 341 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSL 162
                                                LGV TLL ++P A+A +HQ  S 
Sbjct: 268 ----ALLILTLVVILTVKNASIKPVYIMLLSVVIQIILGVITLLLHIPIAIAIAHQVFSF 323

Query: 161 VLLSLAVW 138
           +L   +++
Sbjct: 324 ILFGSSLY 331


>UniRef50_A0CRQ7 Cluster: Chromosome undetermined scaffold_25, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_25,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 413

 Score = 72.9 bits (171), Expect = 8e-12
 Identities = 51/195 (26%), Positives = 74/195 (37%), Gaps = 1/195 (0%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXX-XXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMT 525
           PRVS YRL  HLS                  +P     T +  K      GL   +  + 
Sbjct: 205 PRVSTYRLTVHLSMALSLYSLLIWNAATLFKKPQHLQITPENYKTHLKFRGLGIGLIHLV 264

Query: 524 FITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGX 345
            I  ++GA +AG+DAG V+N++P M    +P ++   SP  KNF EN   VQF+HR    
Sbjct: 265 AINLLTGAAMAGIDAGKVFNTWPTMNGQIVPANLFKASPFYKNFFENVVMVQFNHRNAAY 324

Query: 344 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGS 165
                                                  G+  LL  V     + HQ  +
Sbjct: 325 LTYTFGSYITYLAYKSNLPKQARYMCYALYGVLNYQLLTGIVALLNQVQVHSGSIHQFNA 384

Query: 164 LVLLSLAVWLTHEVK 120
           L +L+ ++ L H V+
Sbjct: 385 LNVLTASLLLCHSVR 399


>UniRef50_Q4UKQ2 Cluster: Cytochrome c oxidase assembly protein;
           n=8; Rickettsia|Rep: Cytochrome c oxidase assembly
           protein - Rickettsia felis (Rickettsia azadi)
          Length = 337

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 55/194 (28%), Positives = 78/194 (40%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTF 522
           P VS +RLA HL                         +   +K     +G+A  V    +
Sbjct: 147 PSVSHFRLAFHLIIAVIIYHILFYQLIKNRCDILLIPSQTDLKLPLIFSGIAITV---IY 203

Query: 521 ITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXX 342
           +    GA VAGLDAGL+YNSFP MGDN++P +I      + N   +P  +QF HR LG  
Sbjct: 204 VQIFLGAMVAGLDAGLIYNSFPLMGDNFIPMEIKDNFFNLANL-HDPVFIQFIHR-LGGY 261

Query: 341 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSL 162
                                                 G+ TLL  VP  +A+ HQ  ++
Sbjct: 262 SVFLVVVVLVICLLKIEHPKLNKIAYFLMIALLMQISTGIITLLYSVPIIIASIHQLFAI 321

Query: 161 VLLSLAVWLTHEVK 120
           +LLS+ +W    +K
Sbjct: 322 ILLSIIIWCYFIIK 335


>UniRef50_A7AML1 Cluster: Cytochrome c oxidase assembly protein,
           putative; n=1; Babesia bovis|Rep: Cytochrome c oxidase
           assembly protein, putative - Babesia bovis
          Length = 443

 Score = 71.7 bits (168), Expect = 2e-11
 Identities = 51/189 (26%), Positives = 76/189 (40%)
 Frame = -2

Query: 701 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTF 522
           PRVS YRL  H S                ++  P  A    + +++    +A    +  F
Sbjct: 254 PRVSPYRLCIHFSNALAMYSICFWNGFKIIKSQPLLAPAPALLKVRR---MAMITLSSMF 310

Query: 521 ITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXX 342
            T V G  VAG DAGL YN++PKM D ++P+D    + + K+  E    +QF+HR LG  
Sbjct: 311 CTMVYGTLVAGNDAGLAYNTWPKMMDTFIPNDYAEVN-SAKHLFEKTGVIQFNHRCLGYI 369

Query: 341 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSL 162
                                                +GV T+L  VP   A +H   ++
Sbjct: 370 TFLMSLATYYKARSPGVPRAVRSLAMGVTHAAVLQIVIGVITVLKTVPLHGAMAHHTNAM 429

Query: 161 VLLSLAVWL 135
           VL S+ + L
Sbjct: 430 VLWSMLLML 438


>UniRef50_Q6N660 Cluster: Possible cytochrome c oxidase assembly
           protein precursor; n=10; Rhizobiales|Rep: Possible
           cytochrome c oxidase assembly protein precursor -
           Rhodopseudomonas palustris
          Length = 368

 Score = 70.5 bits (165), Expect = 4e-11
 Identities = 60/194 (30%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G S    VSQ RLA HLS                      AA ++       +T LA  +
Sbjct: 151 GLSQRTEVSQVRLATHLSLALIIYAAIVWTLRRMADGARVAAPVRL-----RVTALA--L 203

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAF--SPTIKNFTENPTTVQFD 363
             +TF+   +GA VAGL AG +YN++P++    +PD    +  SP  KN  +N  TVQFD
Sbjct: 204 LGLTFVQLYAGALVAGLRAGRLYNTWPEIDGALIPDAARLWFESPWWKNLFDNHLTVQFD 263

Query: 362 HRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAA 183
           HR+L                                        LG+ T+L   P  LA 
Sbjct: 264 HRML---AYALWTLAALHMIDALRTRAAARGAVQLFLALTAQATLGIFTVLYAAPIDLAL 320

Query: 182 SHQAGSLVLLSLAV 141
            HQA +LV+L+LAV
Sbjct: 321 VHQAMALVVLTLAV 334


>UniRef50_Q5DHU8 Cluster: SJCHGC09297 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09297 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 120

 Score = 70.5 bits (165), Expect = 4e-11
 Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
 Frame = -2

Query: 452 MGDNWLPDDILA--FSPTIKNFTENPTTVQFDHRVLGXXXXXXXX---XXXXXXXXXXXX 288
           M D W+PDD++   +  T+KNF +NPT VQF HR+L                        
Sbjct: 1   MADRWIPDDLIVSRYGSTVKNFLDNPTAVQFTHRMLAYTTVLTTGLLWIKVMRLGVTCTG 60

Query: 287 XXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLVLLSLAVWLTH 129
                              LG+ TLL YVP +L + HQ G ++LLS  +W TH
Sbjct: 61  PRIRNAAHLVLGAAFGQSLLGITTLLYYVPVSLGSLHQCGGVILLSSLLWFTH 113


>UniRef50_Q2W552 Cluster: Uncharacterized protein required for
           cytochrome oxidase assembly; n=2; Magnetospirillum|Rep:
           Uncharacterized protein required for cytochrome oxidase
           assembly - Magnetospirillum magneticum (strain AMB-1 /
           ATCC 700264)
          Length = 354

 Score = 70.1 bits (164), Expect = 5e-11
 Identities = 52/198 (26%), Positives = 80/198 (40%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G  D P VS YRL AHL+                L    +    +   ++ ++      +
Sbjct: 157 GLVDNPAVSHYRLTAHLALAFLIHGWMFWLALDILADHRSTRR-RAHGDVGAVRSWMLGL 215

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHR 357
             +  +T + G  VAGL AGL+YN++P M    +P D+  F     +  E+  TVQF HR
Sbjct: 216 TGLVIVTLLFGGLVAGLKAGLIYNTWPLMDGAIVPKDL--FPEGFHSLFEDIKTVQFGHR 273

Query: 356 VLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASH 177
            L                                        LG+ TL+  VP  LA++H
Sbjct: 274 TL-AEITIVVALVGWFRTRARLGTQTPAAIHAVGLMALLQVGLGIGTLVMVVPVWLASAH 332

Query: 176 QAGSLVLLSLAVWLTHEV 123
           Q G++ LL+L +W  H++
Sbjct: 333 QMGAMALLTLCLWALHDL 350


>UniRef50_A5FXV4 Cluster: Cytochrome oxidase assembly; n=1;
           Acidiphilium cryptum JF-5|Rep: Cytochrome oxidase
           assembly - Acidiphilium cryptum (strain JF-5)
          Length = 367

 Score = 69.3 bits (162), Expect = 1e-10
 Identities = 47/192 (24%), Positives = 70/192 (36%)
 Frame = -2

Query: 695 VSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 516
           VS +RL+ H                  L+P       ++         +A     +  I 
Sbjct: 173 VSVFRLSVHYCFATLLAIAVFATALTVLKPAETRLPPEEAARYAGARRMAMGSIVLISIA 232

Query: 515 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 336
            V+G F++G  A  + N+FP M   W+P D  A  P  KNF  N    QFDHR+LG    
Sbjct: 233 IVAGTFLSGTHAYTIDNTFPLMQGRWVPPDYAALHPFWKNFFLNKAATQFDHRLLGTVAA 292

Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLVL 156
                                              LGV TL+  +   +   HQ  +++L
Sbjct: 293 VGVLAAVVAAIRADLPARARDAFLVMGALLIVQYILGVTTLVSKI-LDIGIVHQLNAVLL 351

Query: 155 LSLAVWLTHEVK 120
           L+ AVW   E++
Sbjct: 352 LAAAVWAWFELR 363


>UniRef50_A3K259 Cluster: Cytochrome oxidase assembly; n=1;
           Sagittula stellata E-37|Rep: Cytochrome oxidase assembly
           - Sagittula stellata E-37
          Length = 438

 Score = 66.1 bits (154), Expect = 9e-10
 Identities = 38/116 (32%), Positives = 54/116 (46%)
 Frame = -2

Query: 695 VSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 516
           V+ YRLA HL                  RP       +++ E K + G+   +    F+ 
Sbjct: 238 VASYRLATHLGVAFVILGYIAWYTYALARPERDLIQARRLGEAK-LFGMTTGLLHFAFLQ 296

Query: 515 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLG 348
            + GA VAG+DAG  + S+P M     P D+   +P  +NF ENP  VQF HR+ G
Sbjct: 297 ILLGALVAGIDAGRNFPSWPLMEGGLWPSDMFVETPVWRNFFENPGLVQFMHRMAG 352


>UniRef50_Q0BQ20 Cluster: Heme O monooxygenase; n=1; Granulibacter
           bethesdensis CGDNIH1|Rep: Heme O monooxygenase -
           Granulobacter bethesdensis (strain ATCC BAA-1260 /
           CGDNIH1)
          Length = 374

 Score = 65.7 bits (153), Expect = 1e-09
 Identities = 52/196 (26%), Positives = 76/196 (38%)
 Frame = -2

Query: 707 DVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAM 528
           D   VS YRL  HLS                L P P     + +     +  ++     +
Sbjct: 174 DSTAVSPYRLVVHLSFALLLYSALLWTALSVLNPEP-----RPLPGTVGLRRMSAVTLGL 228

Query: 527 TFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLG 348
             IT ++G FVAG+ AGL YN+FP M    +P+    +    +   EN  TVQFDHR+L 
Sbjct: 229 VCITIIAGGFVAGIHAGLDYNTFPLMDGRLVPE---GYGEGHRAMFENIPTVQFDHRLL- 284

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAG 168
                                                  LG+ATLL  V   +A  HQ  
Sbjct: 285 -ATLTALTALLTGLIGFRRGGNARRAVLPLMVAVILQYALGIATLLSVVAVPVAVVHQGM 343

Query: 167 SLVLLSLAVWLTHEVK 120
           +++LL+ A+   H ++
Sbjct: 344 AVLLLTAAIVTLHSLR 359


>UniRef50_Q89KD9 Cluster: Cytochrome oxidase assembly factor; n=3;
           Rhizobiales|Rep: Cytochrome oxidase assembly factor -
           Bradyrhizobium japonicum
          Length = 360

 Score = 65.3 bits (152), Expect = 2e-09
 Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G S+   VSQYRLA HL                 +R     A +     L+  + L   +
Sbjct: 150 GLSERVEVSQYRLATHL----VLALLIFAGIVWTVRRLKERAQIAAPARLRFTSAL---L 202

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPD-DILAF-SPTIKNFTENPTTVQFD 363
             +TF+    GA VAGL AG  YN++P++    +P  + L F +P  +N  +N  TVQF+
Sbjct: 203 LVVTFVQIYLGALVAGLRAGRAYNTWPEIDGALIPSAERLWFETPWWRNMFDNVLTVQFE 262

Query: 362 HRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAA 183
           HR +                                        LG+ TLL  VP  LA 
Sbjct: 263 HR-MTAYALFVLAALHAFDAVRSRAGLAASGALWLFAAVSLQAVLGILTLLNQVPIGLAL 321

Query: 182 SHQAGSLVLLSLAVWLTHEV 123
           +HQA ++ +L+LAV  T  +
Sbjct: 322 AHQAVAIAVLTLAVMQTERL 341


>UniRef50_A5NUF6 Cluster: Cytochrome oxidase assembly; n=2;
           Alphaproteobacteria|Rep: Cytochrome oxidase assembly -
           Methylobacterium sp. 4-46
          Length = 360

 Score = 65.3 bits (152), Expect = 2e-09
 Identities = 50/187 (26%), Positives = 75/187 (40%), Gaps = 2/187 (1%)
 Frame = -2

Query: 695 VSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 516
           V+  +LAAHL+                 RP  AAA     + L+ +T L   V   T + 
Sbjct: 170 VAPIKLAAHLTLASAIFAGLVWLAAGLDRPAEAAAP----RRLR-LTALLLPVA--TLLQ 222

Query: 515 AVSGAFVAGLDAGLVYNSFPKMGDNWLP--DDILAFSPTIKNFTENPTTVQFDHRVLGXX 342
              G  VAG  AGL YN++P M   ++P    + A +P I+NF +N   VQ +HR++   
Sbjct: 223 IALGGLVAGSKAGLTYNTWPLMDGAFIPPVSGLFAATPWIENFVDNVALVQLNHRLVAYA 282

Query: 341 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSL 162
                                                LG+ TLL  VP     +HQ  ++
Sbjct: 283 LLALALLHALDARRARPGSGAARRAAALAGLVAAQAMLGITTLLLAVPLWAGLAHQVTAM 342

Query: 161 VLLSLAV 141
           ++L +AV
Sbjct: 343 LVLGMAV 349


>UniRef50_A5FA69 Cluster: Cytochrome oxidase assembly precursor;
           n=5; Bacteroidetes|Rep: Cytochrome oxidase assembly
           precursor - Flavobacterium johnsoniae UW101
          Length = 341

 Score = 65.3 bits (152), Expect = 2e-09
 Identities = 56/200 (28%), Positives = 80/200 (40%), Gaps = 2/200 (1%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G  D P VS +RL+ HL+                + P      + KI  L++I    +A+
Sbjct: 146 GLIDNPDVSHFRLSLHLTFAFITFAYTLWVALDLIYP---ERNINKILPLRNIA--RYAL 200

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGD-NWLPDDI-LAFSPTIKNFTENPTTVQFD 363
            A+  I  + G FVAGL+AGL++N +P M D  ++ + + +  S  IKN  E  + VQF 
Sbjct: 201 AAL-LIQIIYGGFVAGLNAGLIHNHWPLMSDGEFIHESVFIEQSSLIKNLIEGKSGVQFV 259

Query: 362 HRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAA 183
           HR                                          LGV TLL  VP AL  
Sbjct: 260 HRTFAYAVVAVILFLFFKSKKYTLTRTQSNGINTLVVFVFIQFLLGVFTLLYSVPLALGL 319

Query: 182 SHQAGSLVLLSLAVWLTHEV 123
            HQ  +  LLS   +  H +
Sbjct: 320 IHQIMAFFLLSAMTYTLHRL 339


>UniRef50_Q4MZC9 Cluster: Cytochrome c oxidase assembly protein,
           putative; n=2; Theileria|Rep: Cytochrome c oxidase
           assembly protein, putative - Theileria parva
          Length = 435

 Score = 65.3 bits (152), Expect = 2e-09
 Identities = 51/193 (26%), Positives = 76/193 (39%)
 Frame = -2

Query: 698 RVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTFI 519
           RVS YRL  H                  L  F    ++   K+L  +  L+ A   +T +
Sbjct: 246 RVSPYRLCFHFFNALAIYSLCFYNSINLL--FGNLRSITPSKDLLRMKWLSGATAFLTLL 303

Query: 518 TAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXX 339
           T   G FVAG D+GL YN++P M   + PD +L+   + + F EN   +QF+HR L    
Sbjct: 304 TMAYGTFVAGNDSGLSYNTWPLMDGKFAPDQVLSIK-SPRQFFENDAVLQFNHRNLAYLT 362

Query: 338 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLV 159
                                               +GV T+L  VP   A +H   ++V
Sbjct: 363 VLSSLVTLVLSKKLNVPRSVSKLSMGVLHASLLQGLIGVLTVLNQVPLHGALAHHFNAVV 422

Query: 158 LLSLAVWLTHEVK 120
           L S+ + L   +K
Sbjct: 423 LWSVILALLRVLK 435


>UniRef50_A5CF77 Cluster: Cytochrome c oxidase assembly protein;
           n=1; Orientia tsutsugamushi Boryong|Rep: Cytochrome c
           oxidase assembly protein - Orientia tsutsugamushi
           (strain Boryong) (Rickettsia tsutsugamushi)
          Length = 359

 Score = 62.9 bits (146), Expect = 8e-09
 Identities = 40/128 (31%), Positives = 58/128 (45%)
 Frame = -2

Query: 506 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXX 327
           GA VAGLDAGL+YN FP MGD+ +P +IL  S     F +N   +QF HR  G       
Sbjct: 227 GALVAGLDAGLIYNEFPNMGDSLIPIEILNQSIDFTMF-DNQVLMQFIHRWFG-ILISGL 284

Query: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLVLLSL 147
                                            G+ TLL +VP   A +HQ G++++L+ 
Sbjct: 285 IICYAIWLIILNKHALRGMGMVAACLVLVQVTTGIITLLYHVPILAALTHQVGAILILTT 344

Query: 146 AVWLTHEV 123
            +++ + V
Sbjct: 345 FLFIQNIV 352


>UniRef50_Q4P0H1 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 653

 Score = 62.9 bits (146), Expect = 8e-09
 Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
 Frame = -2

Query: 569 LKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGD-------NWLPDDILA-- 417
           L+S + L   V  + F TA+SGA VAGLDAGLVYN FP MGD       + L DD  A  
Sbjct: 430 LRSHSRLTKLVAGLVFTTAMSGALVAGLDAGLVYNEFPTMGDGRIAPPMHELIDDRFAQR 489

Query: 416 ---FSPTIKNFTENPTTVQFDHRVL 351
                   +N T+NP TVQ  HR L
Sbjct: 490 ADRSDKVWRNLTQNPVTVQLIHRTL 514



 Score = 37.1 bits (82), Expect = 0.47
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = -2

Query: 227 GVATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVKLLKYIP 102
           G+ TL+  VP  LA++HQAGSL LLS+   L   +  L+ IP
Sbjct: 580 GITTLIYLVPIPLASAHQAGSLALLSV---LLASISALRPIP 618


>UniRef50_Q5FG54 Cluster: Cytochrome C oxidase assembly protein;
           n=6; canis group|Rep: Cytochrome C oxidase assembly
           protein - Ehrlichia ruminantium (strain Gardel)
          Length = 359

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 57/207 (27%), Positives = 82/207 (39%), Gaps = 3/207 (1%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELK-SITGLAHA 540
           G  D P VS YRLA HL                  + F  +   Q    +K + T + + 
Sbjct: 162 GLIDRPHVSHYRLAMHL-------LLALAIFYLLWKHFLLSVVHQIKCNIKVTNTSVFYI 214

Query: 539 VKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDH 360
           + ++  I    GA VAGL+AGL+    P + D    +D+L   P   N   NP TVQF H
Sbjct: 215 IISLITIQITCGALVAGLNAGLLSKDIPFLSDKVGLNDLLFIKPWWHNIYNNPITVQFIH 274

Query: 359 RVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAAS 180
            V+                                        LG+ T +  VP  LA+ 
Sbjct: 275 EVI------ALLILIIAVITLLVLKVRIFPMYLLLALLLIQLTLGILTFIYNVPIILASL 328

Query: 179 HQAGSLVLLSLAVWLTHEVKLL--KYI 105
           HQ  + +L + +++L H VKLL  KY+
Sbjct: 329 HQVTAFILFASSIYLLHYVKLLQIKYV 355


>UniRef50_Q7RLI6 Cluster: Cytochrome c oxidase assembly protein;
           n=6; Plasmodium|Rep: Cytochrome c oxidase assembly
           protein - Plasmodium yoelii yoelii
          Length = 433

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
 Frame = -2

Query: 506 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPT----IKNFTENPTTVQFDHRVLGXXX 339
           G FVAG DAG  YN++PKM D ++PD++  F        K   EN   VQF+HR+L    
Sbjct: 298 GGFVAGNDAGYAYNTWPKMIDKYIPDEVKKFYTNNITQYKQLFENTAIVQFNHRMLSYLI 357

Query: 338 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLV 159
                                                G++ L+ +VP  LA  HQ G   
Sbjct: 358 VLNSFLLYFYSKTMALTKKTKKHFMVLPFITTTQMITGISVLVHHVPIPLALVHQFGGFA 417

Query: 158 LLSLAVWL 135
           +L+  + L
Sbjct: 418 VLTTILHL 425


>UniRef50_A7DDH6 Cluster: Cytochrome oxidase assembly; n=2;
           Methylobacterium extorquens PA1|Rep: Cytochrome oxidase
           assembly - Methylobacterium extorquens PA1
          Length = 382

 Score = 60.1 bits (139), Expect = 6e-08
 Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 2/152 (1%)
 Frame = -2

Query: 551 LAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFS--PTIKNFTENPT 378
           +A  + A+  +    G  VAG  AGL+YN++P M    +P   + F   P I+NF +N  
Sbjct: 212 VAGLLPALVLVQIWLGGLVAGSKAGLLYNTWPDMDGVLVPPARVLFDKVPFIENFIDNLA 271

Query: 377 TVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVP 198
            VQF+HR+                                         LG+ATLL +VP
Sbjct: 272 LVQFNHRLFAYLVVVVAIAHAIQAARTASGSAAAGRAMGLAALATAQMGLGIATLLLHVP 331

Query: 197 TALAASHQAGSLVLLSLAVWLTHEVKLLKYIP 102
                +HQ  ++ +L +A   T   +L + +P
Sbjct: 332 LWAGLAHQVFAMAVLIMA---TVHARLARGVP 360


>UniRef50_Q5PBP7 Cluster: Cytochrome C oxidase assembly protein;
           n=2; Anaplasma|Rep: Cytochrome C oxidase assembly
           protein - Anaplasma marginale (strain St. Maries)
          Length = 341

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 42/122 (34%), Positives = 52/122 (42%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G  D PRVS YRLA HL                         T       +  T  A AV
Sbjct: 143 GLVDTPRVSHYRLAGHLFLTILLFSILWHSFLRCAGVRSTTTTTNA----RFFT--AAAV 196

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHR 357
             +T +  V GA VAGLDAGL YN+FP M    +P  + +       F  + T VQF HR
Sbjct: 197 VGLTVLQMVLGALVAGLDAGLTYNTFPLMDGAIIPQSLFSAKLWHGGFLHDVTAVQFLHR 256

Query: 356 VL 351
           ++
Sbjct: 257 LV 258


>UniRef50_Q9A8H9 Cluster: Cytochrome c oxidase assembly protein,
           putative; n=2; Caulobacter|Rep: Cytochrome c oxidase
           assembly protein, putative - Caulobacter crescentus
           (Caulobacter vibrioides)
          Length = 343

 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 1/155 (0%)
 Frame = -2

Query: 581 KIKELKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI 402
           +++E     G A A     F  ++ GA VAG DAG VYN +P M   + P D    +   
Sbjct: 188 RVEERSPWRGWALAFLGAVFFQSLLGALVAGNDAGFVYNDWPLMNGRFFPGD-YGGAGLW 246

Query: 401 KNFTENPTTVQFDHRVLG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLG 225
                +   VQF+HR+                                          LG
Sbjct: 247 GTLAHSQAAVQFNHRIFAYALLLAAVVLVVLARRDRLLVGQGKSLATAVAAVVFLQAALG 306

Query: 224 VATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVK 120
           V TL+  VP +L   HQAG+ VLL++A      V+
Sbjct: 307 VWTLMAAVPISLGVLHQAGAAVLLAVATAFAWRVR 341


>UniRef50_UPI0000E2263C Cluster: PREDICTED: similar to Cox15
           protein; n=1; Pan troglodytes|Rep: PREDICTED: similar to
           Cox15 protein - Pan troglodytes
          Length = 168

 Score = 56.4 bits (130), Expect = 7e-07
 Identities = 20/34 (58%), Positives = 28/34 (82%)
 Frame = -2

Query: 452 MGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVL 351
           MG++W+P+D+  FSP ++N  ENPT VQFDHR+L
Sbjct: 1   MGESWIPEDLFTFSPILRNVFENPTMVQFDHRIL 34



 Score = 52.0 bits (119), Expect = 2e-05
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -2

Query: 227 GVATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVKLLKYIPK 99
           G++TLL YVPT LAA+HQ+GSL LL+ A+WL +E   L+ +PK
Sbjct: 129 GISTLLMYVPTPLAATHQSGSLALLTGALWLMNE---LRRVPK 168


>UniRef50_A3UCD7 Cluster: Cytochrome oxidase assembly; n=2;
           Hyphomonadaceae|Rep: Cytochrome oxidase assembly -
           Oceanicaulis alexandrii HTCC2633
          Length = 361

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 50/180 (27%), Positives = 69/180 (38%)
 Frame = -2

Query: 695 VSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 516
           VSQYRLA HLS                      A T  ++    +I        A+ F  
Sbjct: 162 VSQYRLATHLSMAFLILGLTLWTALELRYGQAQALTRSRLFRPAAIFW-----GAVLFQI 216

Query: 515 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 336
           A+ GAFVAGLDAG ++N++P      +PDD L+  P  +   E+   VQF HR       
Sbjct: 217 AL-GAFVAGLDAGRIFNTWPGFYGQLIPDDYLSGMPFWQAIFESRPAVQFQHRWF-AYIL 274

Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLVL 156
                                              LG+ TL+   P +L+  HQAG ++L
Sbjct: 275 FVGGLWLGWRMIRSPAVELKRMGVVVSAALLVQVALGIITLIHVAPLSLSLMHQAGGIIL 334


>UniRef50_Q4FLV1 Cluster: Cytochrome c oxidase assembly protein;
           n=2; Candidatus Pelagibacter ubique|Rep: Cytochrome c
           oxidase assembly protein - Pelagibacter ubique
          Length = 336

 Score = 52.0 bits (119), Expect = 2e-05
 Identities = 34/121 (28%), Positives = 50/121 (41%)
 Frame = -2

Query: 512 VSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXX 333
           V GAF++GLD GL+YNS+P M  ++ P+D+            NP+ +QF HR        
Sbjct: 208 VLGAFLSGLDGGLIYNSWPDMNGSFFPNDVSYGDLITTQLFNNPSIIQFLHR---STAYL 264

Query: 332 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASHQAGSLVLL 153
                                             LG+ TL+  V    A+ HQ GS+++L
Sbjct: 265 LLFFIIILNFIYFKKQYDFKYVLFFDVAILFQIFLGIITLISGVEITYASLHQLGSILVL 324

Query: 152 S 150
           S
Sbjct: 325 S 325


>UniRef50_A5FXV3 Cluster: Cytochrome oxidase assembly; n=1;
           Acidiphilium cryptum JF-5|Rep: Cytochrome oxidase
           assembly - Acidiphilium cryptum (strain JF-5)
          Length = 358

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 30/72 (41%), Positives = 35/72 (48%)
 Frame = -2

Query: 569 LKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFT 390
           L  + GL      +   T   GA VA   A  VYN+FP M  + LP   LA  P   NF 
Sbjct: 193 LARLRGLLSVSIGLIIATIGLGALVAASGALKVYNTFPLMDGHALPPHALAMHPLWLNFL 252

Query: 389 ENPTTVQFDHRV 354
            N  TVQF+HRV
Sbjct: 253 ANKATVQFEHRV 264


>UniRef50_A3VUY2 Cluster: Cytochrome oxidase assembly factor; n=1;
           Parvularcula bermudensis HTCC2503|Rep: Cytochrome
           oxidase assembly factor - Parvularcula bermudensis
           HTCC2503
          Length = 315

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 49/198 (24%), Positives = 70/198 (35%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAV 537
           G SD   VS +RLA HL+                       A  + ++      GL+  +
Sbjct: 100 GLSDRVDVSHFRLALHLATAFLLFGLTLLQALSLWGALQPIAAPRPVR-----VGLS-VL 153

Query: 536 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHR 357
               F+  + GAFVAGL AG  YN++P M     P      SP   +   +   VQF+HR
Sbjct: 154 MGGVFLQIIFGAFVAGLRAGKTYNTWPLMDGEVFPRGYFVGSPDFGDTVNSIAAVQFNHR 213

Query: 356 VLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAASH 177
           +L                                        LG+ T++  VP AL   H
Sbjct: 214 LL--AYVLTGVAIWLLVAVWREHSSLRRWSALILAGIVLQMGLGIWTVVMAVPMALGLLH 271

Query: 176 QAGSLVLLSLAVWLTHEV 123
           Q  +L L  L +   + V
Sbjct: 272 QLAALCLFGLVLTAWYRV 289


>UniRef50_Q1GWK6 Cluster: Cytochrome oxidase assembly precursor;
           n=3; Sphingomonadales|Rep: Cytochrome oxidase assembly
           precursor - Sphingopyxis alaskensis (Sphingomonas
           alaskensis)
          Length = 355

 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 38/113 (33%), Positives = 53/113 (46%)
 Frame = -2

Query: 695 VSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 516
           VS YRLAAHL                  R   A A        + +TG A  V A+ F+ 
Sbjct: 164 VSHYRLAAHL----LTALFLLAGLVWTARDLGALARDPGAPPAR-LTGAAIGVIAILFVQ 218

Query: 515 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHR 357
            + GA+VAGL+AG V +S+P M D+++P+ I          T +P  + F HR
Sbjct: 219 LLLGAWVAGLNAGYVSSSWPLMNDHFVPEGIDWSGGAWLALTNDPFLIHFLHR 271


>UniRef50_Q0BZT0 Cluster: Cytochrome c oxidase assembly protein;
           n=1; Hyphomonas neptunium ATCC 15444|Rep: Cytochrome c
           oxidase assembly protein - Hyphomonas neptunium (strain
           ATCC 15444)
          Length = 351

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 23/66 (34%), Positives = 34/66 (51%)
 Frame = -2

Query: 548 AHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQ 369
           A A+  + F+   +GA VAGLDAG  Y  +P M     P   +     +++F E     Q
Sbjct: 201 AMALMGLIFVQMAAGALVAGLDAGRTYTDWPLMAGEVFPAHYIHAELGVRSFFEGREATQ 260

Query: 368 FDHRVL 351
           F+HR+L
Sbjct: 261 FNHRLL 266


>UniRef50_Q2GCS4 Cluster: Putative cytochrome oxidase assembly
           protein; n=1; Neorickettsia sennetsu str. Miyayama|Rep:
           Putative cytochrome oxidase assembly protein -
           Neorickettsia sennetsu (strain Miyayama)
          Length = 325

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 49/193 (25%), Positives = 70/193 (36%), Gaps = 1/193 (0%)
 Frame = -2

Query: 716 GPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELK-SITGLAHA 540
           G  DVP VS YRLA HL                       + T+ K    K  + G +  
Sbjct: 139 GLLDVPAVSHYRLALHLFCASLLFMVLVYEFL--------SPTVIKGSVFKWHLVGCS-- 188

Query: 539 VKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDH 360
           +  +  +  + G  VAGL AGL+ ++FP M   + P +I  F     N   +P  VQF H
Sbjct: 189 LMFLLSMQIILGGLVAGLKAGLICSTFPLMNGEFFPAEI--FHELSLNCFNDPVAVQFLH 246

Query: 359 RVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTALAAS 180
           R+                                          GV TLL ++P  +A  
Sbjct: 247 RM--SAFLLTFICLVCLVISFFYDRAFRARVFLVASMMLLQMFFGVLTLLFHIPIDIALL 304

Query: 179 HQAGSLVLLSLAV 141
           HQ  + +LL + V
Sbjct: 305 HQIMAFILLGICV 317


>UniRef50_Q1NBL9 Cluster: Cytochrome oxidase assembly; n=4;
           Sphingomonadales|Rep: Cytochrome oxidase assembly -
           Sphingomonas sp. SKA58
          Length = 374

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 35/140 (25%), Positives = 52/140 (37%)
 Frame = -2

Query: 548 AHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQ 369
           A AV     +  + GAF AGLDAG V +++P M D+ +P  I          + +P  V 
Sbjct: 232 ALAVLVTLGVQLMFGAFTAGLDAGYVSSTWPLMNDHLVPQGINWSGSFWATLSSDPYLVH 291

Query: 368 FDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTAL 189
           F HR                                          LG+AT++  +   L
Sbjct: 292 FIHR----WWAWIAAVMLMLLARRAKLARQRGASMALNAAVGTQILLGIATVMTGIALPL 347

Query: 188 AASHQAGSLVLLSLAVWLTH 129
           A  HQA   ++++ A W  H
Sbjct: 348 AVLHQAVGALVVAAAAWAAH 367


>UniRef50_Q66LN8 Cluster: Heme A synthase; n=26;
           Alphaproteobacteria|Rep: Heme A synthase - Rhodobacter
           sphaeroides (Rhodopseudomonas sphaeroides)
          Length = 391

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 46/203 (22%), Positives = 73/203 (35%), Gaps = 10/203 (4%)
 Frame = -2

Query: 707 DVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITGLAHAVKAM 528
           D   V   RLA HL                  R        ++ K+ + +T L   +  +
Sbjct: 177 DKVTVESTRLATHLGLAFIILGLIAWQALLLGRSESDLLQARRQKDGRLVT-LTTVLIGV 235

Query: 527 TFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIK----------NFTENPT 378
            F+  V GA VAG+DAG  + ++P M   +LP ++  + P ++             +NP 
Sbjct: 236 AFLQIVLGALVAGIDAGRGFPTWPDMNGTFLPAEMF-YVPGVETDWRNPAWWLGLLQNPG 294

Query: 377 TVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVP 198
            VQF HR+ G                                       LGV T+L    
Sbjct: 295 FVQFLHRMAG-YTLAALGLIFWIFGRRSRHRATRGAFDLLAMALLAQILLGVGTVLSAAE 353

Query: 197 TALAASHQAGSLVLLSLAVWLTH 129
             +A +HQ G++V+  L +   H
Sbjct: 354 WQVAIAHQVGAVVIWVLILHARH 376


>UniRef50_A3JBB5 Cluster: Cytochrome oxidase assembly protein; n=19;
           Gammaproteobacteria|Rep: Cytochrome oxidase assembly
           protein - Marinobacter sp. ELB17
          Length = 378

 Score = 36.7 bits (81), Expect = 0.63
 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -2

Query: 227 GVATLLCYVPTALAASHQA-GSLVLLSLAVWLTHEVKLLKYIPK**GGLALNNSI 66
           G+A ++ Y+P A+A +H A G+L+LLS+   + H+ +L + +P    G A NNS+
Sbjct: 315 GLANVILYIPLAVAVAHNATGALLLLSVIQLIWHQRQLSQGLPVQLSG-AKNNSM 368


>UniRef50_Q10G34 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 271

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 22/60 (36%), Positives = 27/60 (45%)
 Frame = +3

Query: 456 GEGIVDQACVQTRHEGSGDGRDESHRLDGVREAGDALQLLDFLQSSRRREGAEHPQGSAK 635
           G+G    A    R  GS  GR    R  G R  GD  +  D  + S RR G E  +GSA+
Sbjct: 54  GDGTASGAAGARR--GSARGRASGARAQGTRRRGDGARRRDSARGSGRRAGLEAARGSAR 111


>UniRef50_A7TGF4 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 230

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 28/123 (22%), Positives = 46/123 (37%)
 Frame = +1

Query: 37  TDDTDSIKKSIELFSASPPYYLGMYLSSLTSCVSHTASDSSTSEPAWWLAASAVGT*HSS 216
           +  T S   S    S++P        SS+TS  + T + SS+  P    ++S+V T  SS
Sbjct: 108 SSSTSSSSTSTSASSSAPATTSSSSSSSMTSSSAPTTTSSSSVAPTTSSSSSSVATTTSS 167

Query: 217 VATPSPACIQXXXXXXXXXXXXPGDSGLLRDSNHSVLAAARVLAPSTRWSNCTVVGFSVK 396
            +T +P                   S     ++H+V         +  +S   + G    
Sbjct: 168 SSTVAPTTSSTSTTPTSTTVSTSHTSSSSETASHTVTTQTENAGHAVEFSGSLLFGALAA 227

Query: 397 FLI 405
           FLI
Sbjct: 228 FLI 230


>UniRef50_A5GCT2 Cluster: Cytochrome oxidase assembly precursor;
           n=1; Geobacter uraniumreducens Rf4|Rep: Cytochrome
           oxidase assembly precursor - Geobacter uraniumreducens
           Rf4
          Length = 286

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 33/145 (22%), Positives = 47/145 (32%)
 Frame = -2

Query: 569 LKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFT 390
           LK    L   + A+ F  A  GA+V    AGL    FP    +WLP       P +    
Sbjct: 141 LKGYALLFFGLGALIFSQAALGAYVRHAQAGLACPDFPTCLGHWLP-------PLL---- 189

Query: 389 ENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLL 210
           + P  + F HR+L                                        +G   + 
Sbjct: 190 DGPMRIHFSHRLLAYLILITTAILYIAALMDERLRRQRKPALFLVITGILQIGVGAGVVQ 249

Query: 209 CYVPTALAASHQAGSLVLLSLAVWL 135
             +  A  A H A +L +LS  VW+
Sbjct: 250 SGLNFAATALHLAVALAMLSALVWM 274


>UniRef50_A1JIL2 Cluster: Putative membrane transport protein
           ATP-binding component precursor; n=3; Yersinia|Rep:
           Putative membrane transport protein ATP-binding
           component precursor - Yersinia enterocolitica serotype
           O:8 / biotype 1B (strain 8081)
          Length = 568

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +3

Query: 99  LGYVLEQLDLVREPHGQRQQHQRARLVARRQRSGHVAQQRGHAQPR 236
           +GY L QL++ R+   +R+   R+ L+ARR+ S  +A QRG    R
Sbjct: 203 IGYPLRQLNMDRQ---RREADYRSGLIARREASDAIAGQRGEYHER 245


>UniRef50_Q9C056 Cluster: Homeobox protein Nkx-6.2; n=27;
           Bilateria|Rep: Homeobox protein Nkx-6.2 - Homo sapiens
           (Human)
          Length = 277

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 651 IVRGITWRSPEGAPPLPGGGYFAENQGVEEHHRP 550
           +V+G  WR P  A P P GG   +  G ++H RP
Sbjct: 121 VVQGAPWRDPRLAGPAPAGGVL-DKDGKKKHSRP 153


>UniRef50_A7QGI3 Cluster: Chromosome undetermined scaffold_92, whole
           genome shotgun sequence; n=4; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_92, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 357

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 516 RDESHRLDGVREAGDALQLLDFLQSSRRREGAEHPQGSA 632
           R E+ R   V++    + L+DF++  R  +G  HP GS+
Sbjct: 141 RREAERAGAVKDTPIVMPLMDFVRQKRAAKGVSHPSGSS 179


>UniRef50_Q4P3S6 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 648

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +3

Query: 471 DQACVQTRHEGSGDGRDESHRLDGVREAGDALQLLDFLQSSRRREGAEHPQGSAK*SRVQ 650
           D A   +R  G  +    S R  G R  G A+  L  L +SRRR     P  S   S + 
Sbjct: 350 DNAASASRSGGGSNPTSRSRR-SGRRSGGTAVSSLGSLLNSRRRSAQSSPGSSGYASPIN 408

Query: 651 YERQT*VRGEPVL-RDPRDI 707
            E    VRG  +L +DP ++
Sbjct: 409 AEE---VRGALILWKDPEEV 425


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,959,349
Number of Sequences: 1657284
Number of extensions: 12310087
Number of successful extensions: 44320
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 42110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44223
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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