Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d06r
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    31   0.051
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   2.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   5.9  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.8  

>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 30.7 bits (66), Expect = 0.051
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 495 HEGSGDGRDESHRLDGVREAGDALQLLDFLQSSRR--REGAEHPQGSA 632
           H G  D R   H +DG   AG+ L L+ + QS  +   E A HP G A
Sbjct: 97  HWGCSDSRGSEHTVDGESFAGE-LHLVHWNQSKYKSFAEAAGHPDGLA 143


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
 Frame = -1

Query: 378 YRAVRPPRAGRQHP----SGGQ 325
           YR  R PRA R+HP    SGGQ
Sbjct: 169 YRVRRAPRAERRHPYTRRSGGQ 190


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/30 (30%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +2

Query: 14  SLLVIFH*LMTLTRLRKVL-NCLVQVLPTT 100
           ++ ++ H L +L  +  +L NC++ ++PTT
Sbjct: 145 AIYILVHPLFSLFIITTILVNCILMIMPTT 174


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 435 KPIVSHFGEGIVDQACVQTRHEGS 506
           + I   +GE I+D   +QT H G+
Sbjct: 659 RAIYGDYGEAILDDVELQTAHRGA 682


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 132 REPHGQRQQHQRARLVARRQRSGHVAQQRGHAQPRL 239
           ++P  Q+Q  Q+ + + RRQ+     Q + +  P+L
Sbjct: 258 QQPQQQQQPQQKQQQLQRRQQQQQQHQGQRYVPPQL 293


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,834
Number of Sequences: 2352
Number of extensions: 12795
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)