Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d06r
(762 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071468-1|AAL49090.1| 393|Drosophila melanogaster RE54691p pro... 198 5e-51
AE013599-3747|AAF47112.1| 393|Drosophila melanogaster CG3803-PA... 198 5e-51
BT024354-1|ABC86416.1| 885|Drosophila melanogaster IP09037p pro... 31 1.7
BT022132-1|AAY51527.1| 885|Drosophila melanogaster IP08837p pro... 31 1.7
AY484701-1|AAR85347.1| 881|Drosophila melanogaster dysfusion pr... 31 1.7
AE014297-3920|AAF56569.3| 881|Drosophila melanogaster CG32474-P... 31 1.7
AB095028-1|BAE53416.1| 918|Drosophila melanogaster bHLH-PAS pro... 31 1.7
AY122253-1|AAM52765.1| 1776|Drosophila melanogaster SD06366p pro... 30 3.0
AY089220-1|AAL89958.1| 944|Drosophila melanogaster AT01839p pro... 30 3.0
AF312693-1|AAK28060.1| 1776|Drosophila melanogaster SPRINT-b pro... 30 3.0
AF312692-1|AAK28059.1| 1790|Drosophila melanogaster SPRINT-a pro... 30 3.0
AE014298-1467|AAO41647.1| 944|Drosophila melanogaster CG33175-P... 30 3.0
AE014298-1465|AAF46599.2| 1776|Drosophila melanogaster CG33175-P... 30 3.0
AE014298-1464|AAS65425.1| 1789|Drosophila melanogaster CG33175-P... 30 3.0
DQ418878-1|ABD77422.1| 1765|Drosophila melanogaster echinus spli... 30 4.0
DQ418877-1|ABD77421.1| 1746|Drosophila melanogaster echinus spli... 30 4.0
AY576488-1|AAS86754.1| 1712|Drosophila melanogaster echinus prot... 30 4.0
AL031130-3|CAA20016.1| 1761|Drosophila melanogaster EG:EG0002.3 ... 30 4.0
AE014298-564|AAF45898.2| 1712|Drosophila melanogaster CG2904-PA ... 30 4.0
AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA... 30 4.0
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB... 29 6.9
AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p pro... 29 9.2
AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-P... 29 9.2
>AY071468-1|AAL49090.1| 393|Drosophila melanogaster RE54691p
protein.
Length = 393
Score = 198 bits (484), Expect = 5e-51
Identities = 104/211 (49%), Positives = 125/211 (59%)
Frame = -2
Query: 731 EDRFHGPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITG 552
EDRF P+DVPRVSQYRLA+HL+ L P + + K+ +I G
Sbjct: 185 EDRFQDPNDVPRVSQYRLASHLAAAFVLYSLSLSKAMSLL--IPTNTFVIQAKKAFNIKG 242
Query: 551 LAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTV 372
L H KAM +TA+SGAFVAGLDAGLVYNSFPKMGD W+PDD+ F+P KN TENPTTV
Sbjct: 243 LTHLTKAMVLLTAISGAFVAGLDAGLVYNSFPKMGDKWIPDDMWTFAPIQKNITENPTTV 302
Query: 371 QFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTA 192
QF+HR+LG LGV TLL YVP
Sbjct: 303 QFNHRILGISTVTLTTALWLVTRRMQLPKRANWAINAVVAMAWTQATLGVTTLLNYVPVP 362
Query: 191 LAASHQAGSLVLLSLAVWLTHEVKLLKYIPK 99
LA +HQ+GSL+LLS A+WL+HEV+LLKY+PK
Sbjct: 363 LATAHQSGSLILLSFALWLSHEVRLLKYLPK 393
>AE013599-3747|AAF47112.1| 393|Drosophila melanogaster CG3803-PA
protein.
Length = 393
Score = 198 bits (484), Expect = 5e-51
Identities = 104/211 (49%), Positives = 125/211 (59%)
Frame = -2
Query: 731 EDRFHGPSDVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXLRPFPAAATLQKIKELKSITG 552
EDRF P+DVPRVSQYRLA+HL+ L P + + K+ +I G
Sbjct: 185 EDRFQDPNDVPRVSQYRLASHLAAAFVLYSLSLSKAMSLL--IPTNTFVIQAKKAFNIKG 242
Query: 551 LAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTV 372
L H KAM +TA+SGAFVAGLDAGLVYNSFPKMGD W+PDD+ F+P KN TENPTTV
Sbjct: 243 LTHLTKAMVLLTAISGAFVAGLDAGLVYNSFPKMGDKWIPDDMWTFAPIQKNITENPTTV 302
Query: 371 QFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVATLLCYVPTA 192
QF+HR+LG LGV TLL YVP
Sbjct: 303 QFNHRILGISTVTLTTALWLVTRRMQLPKRANWAINAVVAMAWTQATLGVTTLLNYVPVP 362
Query: 191 LAASHQAGSLVLLSLAVWLTHEVKLLKYIPK 99
LA +HQ+GSL+LLS A+WL+HEV+LLKY+PK
Sbjct: 363 LATAHQSGSLILLSFALWLSHEVRLLKYLPK 393
>BT024354-1|ABC86416.1| 885|Drosophila melanogaster IP09037p
protein.
Length = 885
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 105 YVLEQLDLVREPHGQRQQHQRARLVARRQRSGHVAQQRGHAQPRL 239
+ L+Q + PH Q+QQH + L ++Q+ H+ QQ+ H Q ++
Sbjct: 20 HALQQQQQQQHPH-QQQQHLQHVLQLQQQQQQHLQQQQHHLQHQM 63
>BT022132-1|AAY51527.1| 885|Drosophila melanogaster IP08837p
protein.
Length = 885
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 105 YVLEQLDLVREPHGQRQQHQRARLVARRQRSGHVAQQRGHAQPRL 239
+ L+Q + PH Q+QQH + L ++Q+ H+ QQ+ H Q ++
Sbjct: 20 HALQQQQQQQHPH-QQQQHLQHVLQLQQQQQQHLQQQQHHLQHQM 63
>AY484701-1|AAR85347.1| 881|Drosophila melanogaster dysfusion
protein.
Length = 881
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 105 YVLEQLDLVREPHGQRQQHQRARLVARRQRSGHVAQQRGHAQPRL 239
+ L+Q + PH Q+QQH + L ++Q+ H+ QQ+ H Q ++
Sbjct: 20 HALQQQQQQQHPH-QQQQHLQHVLQLQQQQQQHLQQQQHHLQHQM 63
>AE014297-3920|AAF56569.3| 881|Drosophila melanogaster CG32474-PA
protein.
Length = 881
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 105 YVLEQLDLVREPHGQRQQHQRARLVARRQRSGHVAQQRGHAQPRL 239
+ L+Q + PH Q+QQH + L ++Q+ H+ QQ+ H Q ++
Sbjct: 20 HALQQQQQQQHPH-QQQQHLQHVLQLQQQQQQHLQQQQHHLQHQM 63
>AB095028-1|BAE53416.1| 918|Drosophila melanogaster bHLH-PAS
protein similar to humanNXF protein.
Length = 918
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 105 YVLEQLDLVREPHGQRQQHQRARLVARRQRSGHVAQQRGHAQPRL 239
+ L+Q + PH Q+QQH + L ++Q+ H+ QQ+ H Q ++
Sbjct: 56 HALQQQQQQQHPH-QQQQHLQHVLQLQQQQQQHLQQQQHHLQHQM 99
>AY122253-1|AAM52765.1| 1776|Drosophila melanogaster SD06366p
protein.
Length = 1776
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 624 PEGAPPLPGGGYFA 583
P GAPPLPGGG F+
Sbjct: 629 PTGAPPLPGGGLFS 642
>AY089220-1|AAL89958.1| 944|Drosophila melanogaster AT01839p
protein.
Length = 944
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 624 PEGAPPLPGGGYFA 583
P GAPPLPGGG F+
Sbjct: 180 PTGAPPLPGGGLFS 193
>AF312693-1|AAK28060.1| 1776|Drosophila melanogaster SPRINT-b
protein.
Length = 1776
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 624 PEGAPPLPGGGYFA 583
P GAPPLPGGG F+
Sbjct: 629 PTGAPPLPGGGLFS 642
>AF312692-1|AAK28059.1| 1790|Drosophila melanogaster SPRINT-a
protein.
Length = 1790
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 624 PEGAPPLPGGGYFA 583
P GAPPLPGGG F+
Sbjct: 643 PTGAPPLPGGGLFS 656
>AE014298-1467|AAO41647.1| 944|Drosophila melanogaster CG33175-PH,
isoform H protein.
Length = 944
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 624 PEGAPPLPGGGYFA 583
P GAPPLPGGG F+
Sbjct: 180 PTGAPPLPGGGLFS 193
>AE014298-1465|AAF46599.2| 1776|Drosophila melanogaster CG33175-PG,
isoform G protein.
Length = 1776
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 624 PEGAPPLPGGGYFA 583
P GAPPLPGGG F+
Sbjct: 629 PTGAPPLPGGGLFS 642
>AE014298-1464|AAS65425.1| 1789|Drosophila melanogaster CG33175-PA,
isoform A protein.
Length = 1789
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 624 PEGAPPLPGGGYFA 583
P GAPPLPGGG F+
Sbjct: 642 PTGAPPLPGGGLFS 655
>DQ418878-1|ABD77422.1| 1765|Drosophila melanogaster echinus splice
form 3 protein.
Length = 1765
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 562 LFNSLIFCKVAAAGKGRSTLRAPPSNPAYNMNARLK 669
L +L+ C AAAG+ R+ + AP SNP AR+K
Sbjct: 729 LETALVLCN-AAAGRARAAMDAPYSNPHTMTFARMK 763
>DQ418877-1|ABD77421.1| 1746|Drosophila melanogaster echinus splice
form 1 protein.
Length = 1746
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 562 LFNSLIFCKVAAAGKGRSTLRAPPSNPAYNMNARLK 669
L +L+ C AAAG+ R+ + AP SNP AR+K
Sbjct: 710 LETALVLCN-AAAGRARAAMDAPYSNPHTMTFARMK 744
>AY576488-1|AAS86754.1| 1712|Drosophila melanogaster echinus
protein.
Length = 1712
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 562 LFNSLIFCKVAAAGKGRSTLRAPPSNPAYNMNARLK 669
L +L+ C AAAG+ R+ + AP SNP AR+K
Sbjct: 676 LETALVLCN-AAAGRARAAMDAPYSNPHTMTFARMK 710
>AL031130-3|CAA20016.1| 1761|Drosophila melanogaster EG:EG0002.3
protein.
Length = 1761
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 562 LFNSLIFCKVAAAGKGRSTLRAPPSNPAYNMNARLK 669
L +L+ C AAAG+ R+ + AP SNP AR+K
Sbjct: 725 LETALVLCN-AAAGRARAAMDAPYSNPHTMTFARMK 759
>AE014298-564|AAF45898.2| 1712|Drosophila melanogaster CG2904-PA
protein.
Length = 1712
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 562 LFNSLIFCKVAAAGKGRSTLRAPPSNPAYNMNARLK 669
L +L+ C AAAG+ R+ + AP SNP AR+K
Sbjct: 676 LETALVLCN-AAAGRARAAMDAPYSNPHTMTFARMK 710
>AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA,
isoform A protein.
Length = 1314
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -1
Query: 726 QVPWTFRCPEGLAIQARRALKSGVHIVRGITWRSPEGAPPLPGGGYFAENQGVEEHHRPR 547
Q+ TF+CP + A G +++ + + P +PG + N V+ HHR
Sbjct: 422 QLVATFKCPSEPKLSAYPVTMHGYPVMQFVQYSMPPPCSWVPGPPPSSGN--VDAHHRGS 479
Query: 546 ARRQG 532
A R G
Sbjct: 480 AHRHG 484
>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
protein.
Length = 5146
Score = 29.1 bits (62), Expect = 6.9
Identities = 22/79 (27%), Positives = 29/79 (36%)
Frame = +1
Query: 472 TRPASRPATKAPETAVMKVIALTACARPVMLFNSLIFCKVAAAGKGRSTLRAPPSNPAYN 651
T PAS A ++ V+ TA S + +AG G S+L PP +
Sbjct: 3193 TTPASGSNASATSSSTTSVVG-TAAPTATSSIASGLLANAVSAGSGSSSLVVPPVAASAT 3251
Query: 652 MNARLKCAASLYCETLGTS 708
R L TLG S
Sbjct: 3252 GGTRRSSIPVLISSTLGPS 3270
>AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p
protein.
Length = 593
Score = 28.7 bits (61), Expect = 9.2
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +1
Query: 31 SLTDDTDSIKKSIELFSASPPYYLGMYLSSLTSCVSHTASDSSTSEPAWWLAASAVGT*H 210
++ DD + SI ++ S +TS + T++ SSTS LAA
Sbjct: 25 AVDDDVATSTSSITSIGSASNSGFSASWSGITSFSTSTSTTSSTSTSVAALAAPLTSGPG 84
Query: 211 SSVATPSPA 237
S ATPSP+
Sbjct: 85 DSSATPSPS 93
>AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-PA
protein.
Length = 1424
Score = 28.7 bits (61), Expect = 9.2
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +1
Query: 31 SLTDDTDSIKKSIELFSASPPYYLGMYLSSLTSCVSHTASDSSTSEPAWWLAASAVGT*H 210
++ DD + SI ++ S +TS + T++ SSTS LAA
Sbjct: 856 AVDDDVATSTSSITSIGSASNSGFSASWSGITSFSTSTSTTSSTSTSVAALAAPLTSGPG 915
Query: 211 SSVATPSPA 237
S ATPSP+
Sbjct: 916 DSSATPSPS 924
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,609,893
Number of Sequences: 53049
Number of extensions: 574033
Number of successful extensions: 2105
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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