Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d05r
         (488 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011535-1|AAS15671.1|  126|Drosophila melanogaster LP20380p pro...   144   4e-35
AE014134-883|AAF52221.1|  126|Drosophila melanogaster CG8680-PA ...   144   4e-35
AY069143-1|AAL39288.1|  507|Drosophila melanogaster GH15894p pro...    29   4.5  
AE013599-4003|AAF47308.1|  507|Drosophila melanogaster CG2736-PA...    29   4.5  
AY060673-1|AAL28221.3|  446|Drosophila melanogaster GH10523p pro...    28   6.0  
AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-P...    28   6.0  
AE014297-1276|AAF54621.2|  446|Drosophila melanogaster CG31388-P...    28   6.0  

>BT011535-1|AAS15671.1|  126|Drosophila melanogaster LP20380p
           protein.
          Length = 126

 Score =  144 bits (350), Expect = 4e-35
 Identities = 59/85 (69%), Positives = 68/85 (80%)
 Frame = -2

Query: 292 THTGQKWDSDDYRLVRFTNAPKQVNPNWAVNLIAEIPPKEVTERVVWCDGGSGPEGHPRV 113
           THTGQ +D +DYR  RF NA + VN NW + LI E+PPKE TERVV+CDGG GP GHP+V
Sbjct: 40  THTGQVFDKEDYRNARFVNAKRYVNENWGIKLIEEVPPKECTERVVFCDGGDGPLGHPKV 99

Query: 112 YINLDKPGDHSCGYCGLRFIKKTGH 38
           YINLDKPG+H CGYCGLRF+KK  H
Sbjct: 100 YINLDKPGNHICGYCGLRFVKKDDH 124


>AE014134-883|AAF52221.1|  126|Drosophila melanogaster CG8680-PA
           protein.
          Length = 126

 Score =  144 bits (350), Expect = 4e-35
 Identities = 59/85 (69%), Positives = 68/85 (80%)
 Frame = -2

Query: 292 THTGQKWDSDDYRLVRFTNAPKQVNPNWAVNLIAEIPPKEVTERVVWCDGGSGPEGHPRV 113
           THTGQ +D +DYR  RF NA + VN NW + LI E+PPKE TERVV+CDGG GP GHP+V
Sbjct: 40  THTGQVFDKEDYRNARFVNAKRYVNENWGIKLIEEVPPKECTERVVFCDGGDGPLGHPKV 99

Query: 112 YINLDKPGDHSCGYCGLRFIKKTGH 38
           YINLDKPG+H CGYCGLRF+KK  H
Sbjct: 100 YINLDKPGNHICGYCGLRFVKKDDH 124


>AY069143-1|AAL39288.1|  507|Drosophila melanogaster GH15894p
           protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +3

Query: 318 KVRHNTGVLLSIFNFEHEVIIRDLFMTN*FYYLRFKYVGTYLQGIN 455
           KV+H     L+ F F+  +++ D+F+T+  YY  +++    LQ ++
Sbjct: 147 KVKHTAP--LAAFGFDAALMMEDIFVTDSVYYFLWEFTRPLLQTLS 190


>AE013599-4003|AAF47308.1|  507|Drosophila melanogaster CG2736-PA
           protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +3

Query: 318 KVRHNTGVLLSIFNFEHEVIIRDLFMTN*FYYLRFKYVGTYLQGIN 455
           KV+H     L+ F F+  +++ D+F+T+  YY  +++    LQ ++
Sbjct: 147 KVKHTAP--LAAFGFDAALMMEDIFVTDSVYYFLWEFTRPLLQTLS 190


>AY060673-1|AAL28221.3|  446|Drosophila melanogaster GH10523p
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
 Frame = -2

Query: 340 TPVLCRTLTNKIEDISTHTGQKWDSDDYRLVRFTNAPKQVNPNWAVNLIAEIPPKEVTER 161
           +PVL   L ++++ I     Q  ++D+   ++ T   + +N   +V      P      +
Sbjct: 108 SPVL--QLNDRMDFIFDPEPQDKNTDELASIKTTTTTEYMNAYQSVASPQSSPELSTDSQ 165

Query: 160 VV--WCDGGSGPEGHPR--VYINLDKPGDHSCGYCGLRF 56
           +     D G  PE  P      N D    H+C  CGL F
Sbjct: 166 LSNEHFDMGLSPESEPESEAIDNRDTSSSHTCSKCGLEF 204


>AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-PA
           protein.
          Length = 1960

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +3

Query: 132 GPLPPSHQTTLSVTSLGGISAIKFTAQFGFTCFG 233
           G   PS   T + TS GG S    T  FG + FG
Sbjct: 3   GGAKPSFGATPAATSFGGFSGTTTTTPFGQSAFG 36


>AE014297-1276|AAF54621.2|  446|Drosophila melanogaster CG31388-PA
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
 Frame = -2

Query: 340 TPVLCRTLTNKIEDISTHTGQKWDSDDYRLVRFTNAPKQVNPNWAVNLIAEIPPKEVTER 161
           +PVL   L ++++ I     Q  ++D+   ++ T   + +N   +V      P      +
Sbjct: 108 SPVL--QLNDRMDFIFDPEPQDKNTDELASIKTTTTTEYMNAYQSVASPQSSPELSTDSQ 165

Query: 160 VV--WCDGGSGPEGHPR--VYINLDKPGDHSCGYCGLRF 56
           +     D G  PE  P      N D    H+C  CGL F
Sbjct: 166 LSNEHFDMGLSPESEPESEAIDNRDTSSSHTCSKCGLEF 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,395,085
Number of Sequences: 53049
Number of extensions: 402351
Number of successful extensions: 896
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)