Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d03r
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.5  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 691 TSNQLEVFKEQDVSESANTY 632
           T+  + V K+QDVS S N +
Sbjct: 42  TTQSVSVTKDQDVSSSVNRF 61


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 163 PARVSDPASVSLIFINSCTL 222
           P  +S+ + VSLIF+ +CTL
Sbjct: 234 PFLISNISLVSLIFLFNCTL 253


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 211 SCTLGMCSINT*ANGLDCSRSS 276
           +C LG   IN   N  DC+ +S
Sbjct: 10  TCPLGFSGINCQTNDEDCTETS 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,904
Number of Sequences: 336
Number of extensions: 2595
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)