Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d03f
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.5  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 541 VLCVIFMIGEIVGGYLSNSLAIAT 612
           +LC +   G+ +G YLS+ + +AT
Sbjct: 111 LLCKVVKYGQTLGPYLSSYVLMAT 134


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/53 (20%), Positives = 25/53 (47%)
 Frame = -1

Query: 296 FSCPLTISLFPTRQPGVSDLSVMYWTSTSSNIAARSAFVLFNLSLDKLFDLYL 138
           F  P+ + L   +   V DLS +++   ++ + + +  +     +  LF +YL
Sbjct: 194 FGVPIFLVLVFVQMQSVQDLSDIFYYKDTAQLVSLALLMQLTQLVPALFVIYL 246


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 582 PAYYFPYHEYDAQHAGH 532
           PA++  Y  Y A++ GH
Sbjct: 438 PAFHNQYAHYPAEYYGH 454


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 467 ASEMLPFLFSESSPSALVSMTAQHPVDGF 381
           +S++LP LFS SS S    +     +D F
Sbjct: 222 SSKVLPLLFSVSSSSYNCEVLFSFLIDQF 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.132    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,729
Number of Sequences: 336
Number of extensions: 2819
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)