Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d03f
(629 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47415| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_21595| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_57583| Best HMM Match : DUF572 (HMM E-Value=2.1) 31 0.77
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_14902| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_43100| Best HMM Match : Metallophos (HMM E-Value=0.63) 29 3.1
SB_46128| Best HMM Match : VQ (HMM E-Value=4.6) 28 5.4
SB_21913| Best HMM Match : C2 (HMM E-Value=0.31) 28 5.4
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 28 5.4
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19) 28 7.2
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 28 7.2
SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_1743| Best HMM Match : DUF563 (HMM E-Value=3.7) 28 7.2
SB_12920| Best HMM Match : zf-CCHC (HMM E-Value=6.2e-05) 27 9.5
SB_24101| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25) 27 9.5
SB_434| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_47415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 584
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = +1
Query: 475 HCHRSRNEEIDKRARRKLIVASVLCVIFMIGEIVGGYLSNSLAIATDAAHL 627
HCH + ++R R+KL ASV+C+ F++ E+VGGYL++SLAI TDAAH+
Sbjct: 129 HCHEFKPIHSNRRTRKKLTTASVVCLFFVVAEVVGGYLAHSLAIMTDAAHM 179
>SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1
Query: 520 RKLIVASVLCVIFMIGEIVGGYLSNSLAIATDAAHL 627
R+L +AS LC+ FMI E VGGY SNSLAI TDAAH+
Sbjct: 10 RRLRIASFLCLFFMIAEFVGGYFSNSLAIMTDAAHM 45
>SB_21595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 58 INEKYHNDTKINTLNAFTDKNLVPLSGRYRSKSLSSDKLNKTNA 189
+NEKY ND +N F K ++P+ + ++ +SD++NK +
Sbjct: 98 LNEKYRNDIDLNDA-MFASKRILPVR-EFNTRRYTSDEVNKVRS 139
>SB_57583| Best HMM Match : DUF572 (HMM E-Value=2.1)
Length = 638
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 289 QLNINGYNDGHVSYGTDNQIRGRRVIFCVHGNPSTGCCAVIETSADGD 432
Q + Y G YG D+ + G V+ C GNP G A+ DG+
Sbjct: 495 QTRDSSYTSGVCCYGEDHDVIGVVVVLC--GNPPCGFKALFTVDIDGE 540
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 30.3 bits (65), Expect = 1.3
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 10/166 (6%)
Frame = +1
Query: 58 INEKYHNDTKINTLNAFTDKNLVPLSGRYRSKSLSSDKLNKTNADRAAILEDVEVQYITD 237
+ E DT I TLN + + + + L+ D+A I E+ Q
Sbjct: 1456 VEEIQEKDTSIKTLNDEKNNLTIDMDALRNEVETLRNSLDSEQTDKAEI-ENENFQLKRK 1514
Query: 238 KSETPGCLVG--------NRDMVSGQLNINGYNDGHVSYGTD-NQIRGRRVIFCVHGNPS 390
+E G L G M+ Q I + D +Y + RG++ G+P+
Sbjct: 1515 ITEVEGRLHGILMEKEKLKESMLHYQKRILKFKDDVQNYSKEYTSPRGKK------GDPN 1568
Query: 391 TGCCAVIETSADG-DDSEKRNGSISEAERHCHRSRNEEIDKRARRK 525
T +IE G DD +R S +++ RSR+ ++R R K
Sbjct: 1569 T----LIEDKQFGLDDDRRRKRSSKSSKKRDRRSRSRSRERRRRSK 1610
>SB_14902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 469 ERHCHRSRNEEIDKRARRKLIVASVLC-VIFMIGEIVGGYLSNSLAI 606
+ H + E + +A + S+ C V+ +IG+IV YLS SL+I
Sbjct: 128 DEHLESADITEANDKAVALAVRLSLFCNVLLLIGKIVASYLSGSLSI 174
>SB_43100| Best HMM Match : Metallophos (HMM E-Value=0.63)
Length = 234
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 295 NINGYNDGHVSYGTDNQIRGRRVIFCVHGNPSTGCCAVIET 417
N++GY GH+ Y + +++G + ++C G+ C A++ET
Sbjct: 164 NVDGYICGHIHYAS-FRLQGEK-LYCNDGDWVEHCTALVET 202
>SB_46128| Best HMM Match : VQ (HMM E-Value=4.6)
Length = 333
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 413 SMTAQHPVDGFPWTQNMTLRPRI*LSVPYDTCP 315
S+T Q P P N T RP + L PY P
Sbjct: 290 SVTLQQPHSALPSRYNTTQRPSVTLQQPYSVLP 322
>SB_21913| Best HMM Match : C2 (HMM E-Value=0.31)
Length = 987
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +1
Query: 397 CCAVIETSADGDDSEKRNGSISEAERHCHRSRNEEIDKRARRKLIVASVLCVIFMI 564
CC V++T GDD E+ + E E + + EE DK+ LI+ L VI I
Sbjct: 444 CCVVVDTVVVGDDDEEND---VEDEDDDNENDKEE-DKKKLIILIMTICLAVITFI 495
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 418 SADGDDSEKRNGSISEAERHCHRSRNEEIDKRARRK 525
S+D DD +R S +++ RSR+ ++R R K
Sbjct: 5 SSDSDDDRRRKRSSKSSKKRDRRSRSRSRERRRRSK 40
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = +1
Query: 31 TTRAMSSHLINEK---YHNDTKINTLNAFTDKNLVPLSGRYRSKSLSSDKLNKTNADRAA 201
TT A+S ++ N +HN T + T + + + + D N + +
Sbjct: 4 TTTALSRYVNNNNNNIHHNKTPMTTTTTALSRYVNNNNNNIHHNKNTDDNNNNSFVKKGE 63
Query: 202 ILEDVEVQYITDKSETPGCLVGNRDMVSG 288
+L E Q + TPG GN + G
Sbjct: 64 LLNLAEQQLLDCTWSTPGVYHGNNGCLGG 92
>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
Length = 1199
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 480 SQIAKRRDRQESEKETHRGQRAVRHIHDRGNSRRVLVQQLSDSDRRR 620
SQI +R + + + G+R R D G RR ++ D DR R
Sbjct: 1089 SQIGRRNEPDREQPKQRVGRRDERDPDDEGTGRRRRGRERDDIDRGR 1135
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 58 INEKYHNDTKINTLNAFTDKNLVPLSGRYRSKSLSSDKL-NKTNADR 195
+NE TKI++LN + + + +++S SDK NK+N +
Sbjct: 254 VNENVMEKTKISSLNGVLESEKIEATSTRKTESEPSDKAGNKSNGTK 300
>SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 492 KRRDRQESEKETHRGQRAVRHIHDRGNS 575
K R +S ETH +R RH H RG++
Sbjct: 56 KARTGSDSSAETHNEERLNRHGHKRGST 83
>SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 103 AFTDKNLVPLSGRYRSKSLSSDKLNKTNADRAAILEDVEVQYITDK 240
A ++ ++PLS S S+ + N+T+A AA+ D +++Y D+
Sbjct: 368 AANNERMLPLSRPAVSLSIPIRETNETDAGAAAVAADFDLEYDGDQ 413
>SB_1743| Best HMM Match : DUF563 (HMM E-Value=3.7)
Length = 249
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 365 MTLRPRI*LSVPYDTCPSLYPFIFSCPLTISLFPTRQPGVS 243
++L P + LS+ D+C SL+P + + PL+I + P V+
Sbjct: 57 VSLHPEVALSLAIDSCASLHPEV-ALPLSIDSRASLHPEVA 96
>SB_12920| Best HMM Match : zf-CCHC (HMM E-Value=6.2e-05)
Length = 845
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 313 DGHVSYGTDNQIRGRRVIFCVHGNPSTGCCAVIETSADGDDSEKR 447
+GH+ RG++ C CC + E +ADG+ S R
Sbjct: 130 EGHIKKDRSCPARGKKYAKCFKSGHFAACC-MGEKAADGEPSRNR 173
>SB_24101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 556 FMIGEIVGGYLSNSLAIATDAAHL 627
F + E++ GY +NS+A+ D+ H+
Sbjct: 28 FFLVELIVGYATNSMALVADSFHM 51
>SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25)
Length = 1508
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 507 QESEKETHRGQRAVRHIHDRGNSRRVLVQQLS---DSDRRRAP 626
+E + TH +R+ H G SRR L+++ DS R R+P
Sbjct: 1097 REWDARTHSRERSSEREHHNGKSRRDLLEKKGSSRDSSRDRSP 1139
>SB_434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 452 PFLFSESSPSALVSMTAQHPVDGFP 378
PF+F+ SPSA+ + + H V P
Sbjct: 120 PFIFTRPSPSAVAGILSHHKVPAVP 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.132 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,279,650
Number of Sequences: 59808
Number of extensions: 368799
Number of successful extensions: 1198
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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