Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d03f
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   0.86 
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   8.0  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 0.86
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +1

Query: 376 HGNPSTGCCAVIETSADGDDSEKRNGSISEAERHCHRSRNEEIDKRARR 522
           +G+PST C A       G+     +G+    E        EEID++ R+
Sbjct: 362 NGSPSTSCGAPPALLGSGEGGSGTHGTDGGGEFQRSYDDEEEIDRKLRQ 410


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 265 GNRDMVSGQLNINGYNDGHVSYGTDNQIRGRRVIFCVHGNPSTGCCAVIET 417
           G +++V  +  + G       YG    +RG R+  C+H    T    +IET
Sbjct: 17  GRKEIVLAENEMPGLMACRQKYGPLKILRGARIAGCLHMTIQT--AVLIET 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.132    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,659
Number of Sequences: 2352
Number of extensions: 11913
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)