Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d02r
         (757 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021376-1|AAX33524.1|  758|Drosophila melanogaster LD46788p pro...    33   0.32 
AE014298-972|AAF46216.3|  758|Drosophila melanogaster CG33691-PA...    33   0.32 
AE014298-971|AAZ52507.1|  702|Drosophila melanogaster CG33691-PC...    33   0.32 
BT003168-1|AAO24923.1|  406|Drosophila melanogaster SD23103p pro...    31   2.2  
AE014134-1828|AAF52904.1|  406|Drosophila melanogaster CG5390-PA...    31   2.2  

>BT021376-1|AAX33524.1|  758|Drosophila melanogaster LD46788p
           protein.
          Length = 758

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 514 NIPLKFLTIRDKNSSCIPNTTLIRRNKFKNKPLCKKESTFQYSFNTQNRHRRHTEQHSRP 693
           N+PL  L++   NS  + + + +RRN         +++  Q S N  N     T+Q S P
Sbjct: 448 NLPLAILSLASNNSGGVSSNSGVRRNNNNTNSNYGRQTHSQSSSNHSNTQTTSTQQQSTP 507


>AE014298-972|AAF46216.3|  758|Drosophila melanogaster CG33691-PA,
           isoform A protein.
          Length = 758

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 514 NIPLKFLTIRDKNSSCIPNTTLIRRNKFKNKPLCKKESTFQYSFNTQNRHRRHTEQHSRP 693
           N+PL  L++   NS  + + + +RRN         +++  Q S N  N     T+Q S P
Sbjct: 448 NLPLAILSLASNNSGGVSSNSGVRRNNNNTNSNYGRQTHSQSSSNHSNTQTTSTQQQSTP 507


>AE014298-971|AAZ52507.1|  702|Drosophila melanogaster CG33691-PC,
           isoform C protein.
          Length = 702

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 514 NIPLKFLTIRDKNSSCIPNTTLIRRNKFKNKPLCKKESTFQYSFNTQNRHRRHTEQHSRP 693
           N+PL  L++   NS  + + + +RRN         +++  Q S N  N     T+Q S P
Sbjct: 392 NLPLAILSLASNNSGGVSSNSGVRRNNNNTNSNYGRQTHSQSSSNHSNTQTTSTQQQSTP 451


>BT003168-1|AAO24923.1|  406|Drosophila melanogaster SD23103p
           protein.
          Length = 406

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 565 PNTTLIRRNKFKNK-PLCKKESTFQYSFNTQNRHRRHTEQHSRPILYYHSFIKHQLYXE 738
           PN  L   +   NK P        ++   TQ   RRH +++ + I+Y+  F K  LY +
Sbjct: 185 PNVVLTAAHCVHNKQPSSIVVRAGEWDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYND 243


>AE014134-1828|AAF52904.1|  406|Drosophila melanogaster CG5390-PA
           protein.
          Length = 406

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 565 PNTTLIRRNKFKNK-PLCKKESTFQYSFNTQNRHRRHTEQHSRPILYYHSFIKHQLYXE 738
           PN  L   +   NK P        ++   TQ   RRH +++ + I+Y+  F K  LY +
Sbjct: 185 PNVVLTAAHCVHNKQPSSIVVRAGEWDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYND 243


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,456,967
Number of Sequences: 53049
Number of extensions: 509340
Number of successful extensions: 860
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)