Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d02f
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   1.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.3  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.3  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   7.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.6  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 95  NFWHKIKAHLLKVRVLGHNCDRHRVHLV 12
           + WH +K  +   +VL  N   HR   V
Sbjct: 171 SIWHSVKKTVAGDKVLDENAAEHREQFV 198


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 318 SYYYYSTKLEYVNYAWYTRVVL 253
           S+Y+Y T+   V +  +T +VL
Sbjct: 41  SFYFYKTEQFTVLWVLFTMIVL 62


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 236 EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 236 EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 258 EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 288


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 236 EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 192 EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 222


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 236 EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 24  EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 54


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 260 EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 290


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 514 QSKLEYNRFLIINHYINIYRYMCVSANTMKV 422
           + +  +NR+L     I I   +C++   +K+
Sbjct: 236 EKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 161 LVGLADQRQAVEVVPPKVL 105
           LVGLAD  Q  + V  K++
Sbjct: 168 LVGLADLNQGSDYVRSKII 186


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 161 LVGLADQRQAVEVVPPKVL 105
           LVGLAD  Q  + V  K++
Sbjct: 169 LVGLADLNQGSDYVRSKII 187


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 161 LVGLADQRQAVEVVPPKVL 105
           LVGLAD  Q  + V  K++
Sbjct: 169 LVGLADLNQGSDYVRSKII 187


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 260 WCYCYDESRLSR 225
           +CYCY  S++++
Sbjct: 272 FCYCYYNSKMTK 283


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 496 NRFLIINHYI 467
           NRF+I+N YI
Sbjct: 187 NRFVILNRYI 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,053
Number of Sequences: 336
Number of extensions: 2260
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)