Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d02f
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    26   0.98 
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   5.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.2  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   9.1  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   9.1  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.8 bits (54), Expect = 0.98
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 467 DVMIYNQKSIIL*FRLKTRNLKSLLYNK 550
           D  I+NQKS  +  R     +KSLLY K
Sbjct: 100 DFCIHNQKSADIKHRALHNEIKSLLYQK 127


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 96  ITEENFWRNYFYRLSL 143
           IT +  WR YFY +S+
Sbjct: 305 ITGQLIWREYFYTMSV 320


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 103 SVITFGTRSKRIFSRFGSSVIIATATGYILS 11
           S +T+G   KRIF   G+ V IA  +  + S
Sbjct: 318 SALTWGHNDKRIFIATGTQVHIAWVSRRVAS 348


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 336 QHFNRISYYYYSTKLEYVNYAWYTRVVL 253
           Q F++ ++ YY+  L  +N+ +   +VL
Sbjct: 105 QEFDQQTFVYYAEVLSVINFYYVPALVL 132


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 340 AATFQSYIILLL*YKARICELCMVHTSGV 254
           A+ + SY++  L  K   C  C +H+  V
Sbjct: 55  ASVYSSYVLPKLYAKLHYCVSCAIHSKVV 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,062
Number of Sequences: 2352
Number of extensions: 8400
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)