Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d01r
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 653 FLGRSCPLQCNDCQPS 700
           F G++C L  +DC+P+
Sbjct: 214 FQGQNCELNVDDCKPN 229


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 634 YGVNKPEAIARIKDLYEELQL 572
           +G N+ EA  R+KDL+ E  L
Sbjct: 571 WGRNEQEAFDRVKDLFLEAVL 591


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 598  KDLYEELQLPHTYSVFEETTYDLLRTQIQQVTR 500
            KD++E     H    FEE  YD  R  +Q   R
Sbjct: 1517 KDVFEN---GHVNKAFEEDNYDHRRNSLQMQQR 1546


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 598  KDLYEELQLPHTYSVFEETTYDLLRTQIQQVTR 500
            KD++E     H    FEE  YD  R  +Q   R
Sbjct: 1517 KDVFEN---GHVNKAFEEDNYDHRRNSLQMQQR 1546


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 598  KDLYEELQLPHTYSVFEETTYDLLRTQIQQVTR 500
            KD++E     H    FEE  YD  R  +Q   R
Sbjct: 1517 KDVFEN---GHVNKAFEEDNYDHRRNSLQMQQR 1546


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 598  KDLYEELQLPHTYSVFEETTYDLLRTQIQQVTR 500
            KD++E     H    FEE  YD  R  +Q   R
Sbjct: 1517 KDVFEN---GHVNKAFEEDNYDHRRNSLQMQQR 1546


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 576 SYPIRTRSSKKLPTISLERRSNKSQGDYLTNC 481
           S P R+ +  ++    L+RR + +  +YL  C
Sbjct: 355 SCPTRSHAVWEMVLNELDRREDPTNDEYLPGC 386


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 411 YTYVLYSHSIYTLRLKMLSKILK 479
           Y+Y  Y   IYT   + LS I K
Sbjct: 85  YSYFFYLSYIYTTYSRKLSGIFK 107


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 411 YTYVLYSHSIYTLRLKMLSKILK 479
           Y+Y  Y   IYT   + LS I K
Sbjct: 41  YSYFFYLSYIYTTYSRKLSGIFK 63


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 588 MKNFSYPIRTRSSKKLPTISL 526
           +KN    +R  S KKL TI+L
Sbjct: 22  LKNEDVQLRLNSIKKLSTIAL 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,821
Number of Sequences: 336
Number of extensions: 3177
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)