Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d01f
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    25   1.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.5  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.5  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    23   9.9  

>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 234 TSVTNSDAMAPRLDQSASKSPQAEETGPKRLLKLQKYHRFLSTLTP 371
           TS   +D   P+  +        ++ GP  L +LQ+  +  S LTP
Sbjct: 31  TSFDGNDGFGPQTRKGRRPVADDQQPGPSGLQRLQQQQQQPSRLTP 76


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 372 QEMPMATRGLAVSKDQSREFMAVFPDIVRDLT 467
           QE P A+   AV   +S    AV  D+V +LT
Sbjct: 230 QEQPRASTSRAVMPPRSEALTAVRGDVVPELT 261


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 372 QEMPMATRGLAVSKDQSREFMAVFPDIVRDLT 467
           QE P A+   AV   +S    AV  D+V +LT
Sbjct: 206 QEQPRASTSHAVMLPRSEASTAVRGDVVPELT 237


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 574 RIVASPLFFLPFGTLYCNSLAN 509
           R + +   F   GTLY N LAN
Sbjct: 90  RSIVNQRLFFDIGTLYKNILAN 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,811
Number of Sequences: 2352
Number of extensions: 13760
Number of successful extensions: 246
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)