Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c24r
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   6.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -3

Query: 586 KVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEV 443
           K+V EK   +L   L  N+I        T  N +  KLL   N  ++V
Sbjct: 4   KLVVEKFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYNIILQV 51


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -3

Query: 586 KVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEV 443
           K+V EK   +L   L  N+I        T  N +  KLL   N  ++V
Sbjct: 22  KLVVEKFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYNIILQV 69


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/46 (19%), Positives = 22/46 (47%)
 Frame = -3

Query: 760 QSTXIYWLVERKAASRNTSVQGNIVTKKKNSSKSIQVNLDKWISEN 623
           Q T  Y+  +   A+       ++  ++KN+++     L  W++E+
Sbjct: 61  QPTTGYYPYDPALAAYGYGAGYDLAARRKNATRESTATLKAWLNEH 106


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 161 YRTKLIKMKPCS*LFNKTSMYRKLPCIIMF 72
           Y  K   + P S     T +Y+KL  ++MF
Sbjct: 11  YVAKFFAITPSSIYDKPTKLYQKLYPVLMF 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,344
Number of Sequences: 336
Number of extensions: 2713
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)