Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c24r
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   1.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.6  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       25   3.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.9  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 685 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNE 536
           T+KKN S   Q+   +W+ E  L  E   +   +    +RR+  A+A NE
Sbjct: 48  TRKKNESLQEQLTQLRWLMEEKL-REQREDAQRREEEARRREEAAKADNE 96


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +3

Query: 507  KERLLCKISFSFKASAKA---FLLFSATTFQ*VSEGTSRHKSFSEIH 638
            KERLL  +SFS   S+ A   F+ FS   FQ     T+++ +  +++
Sbjct: 1423 KERLLMFLSFSPYVSSSAFFEFIPFSGKQFQMCFSATNQYPNMPKLN 1469


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 119 TANYKASFLSISSDNSFLRIESDLRNIIISPCIK 220
           T+N    FL  S D     +E+ LRN  IS  +K
Sbjct: 212 TSNVSVFFLKPSPDTDVSTLETHLRNQSISSVLK 245


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -3

Query: 574 EKRRKA-LAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKEL 431
           E RRK   A++  + E L + L +L   NLK K    +   F+ +C E+
Sbjct: 287 EARRKMNRAKSSEQREDLRR-LYILARSNLKRKIKASKRRCFLALCDEV 334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,966
Number of Sequences: 2352
Number of extensions: 10256
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)