Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c24r
(768 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005389-1|AAH05389.1| 209|Homo sapiens geminin, DNA replicatio... 57 8e-08
BC005185-1|AAH05185.1| 209|Homo sapiens geminin, DNA replicatio... 57 8e-08
AL133264-4|CAC21511.1| 205|Homo sapiens RP3-369A17.3 protein. 57 8e-08
AK222992-1|BAD96712.1| 208|Homo sapiens geminin variant protein. 57 8e-08
AF067855-1|AAC39787.1| 209|Homo sapiens geminin protein. 57 8e-08
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 31 4.5
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 31 4.5
U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein. 31 4.5
AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golg... 31 4.5
EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat ... 31 6.0
DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein. 31 6.0
BC062729-1|AAH62729.1| 258|Homo sapiens ANKRD42 protein protein. 31 6.0
BC150205-1|AAI50206.1| 825|Homo sapiens KIAA1344 protein. 30 7.9
BC142650-1|AAI42651.1| 825|Homo sapiens KIAA1344 protein. 30 7.9
>BC005389-1|AAH05389.1| 209|Homo sapiens geminin, DNA replication
inhibitor protein.
Length = 209
Score = 56.8 bits (131), Expect = 8e-08
Identities = 38/81 (46%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = -3
Query: 709 TSVQGNIV---TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALN 539
TS G IV ++ KN Q + D I EN PS YWK VAEKRRKAL EAL
Sbjct: 62 TSSPGVIVPESSENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALK 115
Query: 538 ENEILHKSLSLLTEENLKYKK 476
ENE LHK + E + KK
Sbjct: 116 ENEKLHKEIEQKDNEIARLKK 136
>BC005185-1|AAH05185.1| 209|Homo sapiens geminin, DNA replication
inhibitor protein.
Length = 209
Score = 56.8 bits (131), Expect = 8e-08
Identities = 38/81 (46%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = -3
Query: 709 TSVQGNIV---TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALN 539
TS G IV ++ KN Q + D I EN PS YWK VAEKRRKAL EAL
Sbjct: 62 TSSPGVIVPESSENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALK 115
Query: 538 ENEILHKSLSLLTEENLKYKK 476
ENE LHK + E + KK
Sbjct: 116 ENEKLHKEIEQKDNEIARLKK 136
>AL133264-4|CAC21511.1| 205|Homo sapiens RP3-369A17.3 protein.
Length = 205
Score = 56.8 bits (131), Expect = 8e-08
Identities = 38/81 (46%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = -3
Query: 709 TSVQGNIV---TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALN 539
TS G IV ++ KN Q + D I EN PS YWK VAEKRRKAL EAL
Sbjct: 58 TSSPGVIVPESSENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALK 111
Query: 538 ENEILHKSLSLLTEENLKYKK 476
ENE LHK + E + KK
Sbjct: 112 ENEKLHKEIEQKDNEIARLKK 132
>AK222992-1|BAD96712.1| 208|Homo sapiens geminin variant protein.
Length = 208
Score = 56.8 bits (131), Expect = 8e-08
Identities = 38/81 (46%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = -3
Query: 709 TSVQGNIV---TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALN 539
TS G IV ++ KN Q + D I EN PS YWK VAEKRRKAL EAL
Sbjct: 61 TSSPGVIVPESSENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALK 114
Query: 538 ENEILHKSLSLLTEENLKYKK 476
ENE LHK + E + KK
Sbjct: 115 ENEKLHKEIEQKDNEIARLKK 135
>AF067855-1|AAC39787.1| 209|Homo sapiens geminin protein.
Length = 209
Score = 56.8 bits (131), Expect = 8e-08
Identities = 38/81 (46%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = -3
Query: 709 TSVQGNIV---TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALN 539
TS G IV ++ KN Q + D I EN PS YWK VAEKRRKAL EAL
Sbjct: 62 TSSPGVIVPESSENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALK 115
Query: 538 ENEILHKSLSLLTEENLKYKK 476
ENE LHK + E + KK
Sbjct: 116 ENEKLHKEIEQKDNEIARLKK 136
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 31.1 bits (67), Expect = 4.5
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Frame = -3
Query: 736 VERKAASRNTSVQGNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRR-- 563
+++K+A N+ Q TK K + ++V+L+K + EN E E +KR+
Sbjct: 1115 LKQKSAHVNSLAQDE--TKLKAHLEKLEVDLNKSLKENTFLQEQLVELKMLAEEDKRKVS 1172
Query: 562 ------KALAEALNENEILH-KSLSLLTEENLKYKKLLDEANSFIEVC---KELMSDAAD 413
K E + H KS L +++L++KKL +E +++C E + +A
Sbjct: 1173 ELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAIQLDICCKKTEALLEAKT 1232
Query: 412 DTGIEIDDTK 383
+ I I +K
Sbjct: 1233 NELINISSSK 1242
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 31.1 bits (67), Expect = 4.5
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Frame = -3
Query: 736 VERKAASRNTSVQGNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRR-- 563
+++K+A N+ Q TK K + ++V+L+K + EN E E +KR+
Sbjct: 1115 LKQKSAHVNSLAQDE--TKLKAHLEKLEVDLNKSLKENTFLQEQLVELKMLAEEDKRKVS 1172
Query: 562 ------KALAEALNENEILH-KSLSLLTEENLKYKKLLDEANSFIEVC---KELMSDAAD 413
K E + H KS L +++L++KKL +E +++C E + +A
Sbjct: 1173 ELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAIQLDICCKKTEALLEAKT 1232
Query: 412 DTGIEIDDTK 383
+ I I +K
Sbjct: 1233 NELINISSSK 1242
>U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.
Length = 2083
Score = 31.1 bits (67), Expect = 4.5
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Frame = -3
Query: 736 VERKAASRNTSVQGNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRR-- 563
+++K+A N+ Q TK K + ++V+L+K + EN E E +KR+
Sbjct: 970 LKQKSAHVNSLAQDE--TKLKAHLEKLEVDLNKSLKENTFLQEQLVELKMLAEEDKRKVS 1027
Query: 562 ------KALAEALNENEILH-KSLSLLTEENLKYKKLLDEANSFIEVC---KELMSDAAD 413
K E + H KS L +++L++KKL +E +++C E + +A
Sbjct: 1028 ELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAIQLDICCKKTEALLEAKT 1087
Query: 412 DTGIEIDDTK 383
+ I I +K
Sbjct: 1088 NELINISSSK 1097
>AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golgin
subfamily a, 4 variant protein.
Length = 1310
Score = 31.1 bits (67), Expect = 4.5
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Frame = -3
Query: 736 VERKAASRNTSVQGNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRR-- 563
+++K+A N+ Q TK K + ++V+L+K + EN E E +KR+
Sbjct: 1146 LKQKSAHVNSLAQDE--TKLKAHLEKLEVDLNKSLKENTFLQEQLVELKMLAEEDKRKVS 1203
Query: 562 ------KALAEALNENEILH-KSLSLLTEENLKYKKLLDEANSFIEVC---KELMSDAAD 413
K E + H KS L +++L++KKL +E +++C E + +A
Sbjct: 1204 ELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAIQLDICCKKTEALLEAKT 1263
Query: 412 DTGIEIDDTK 383
+ I I +K
Sbjct: 1264 NELINISSSK 1273
>EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat
protein transcript variant 2 protein.
Length = 782
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 631 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 476
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 647 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 698
>DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein.
Length = 593
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 631 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 476
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 474 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 525
>BC062729-1|AAH62729.1| 258|Homo sapiens ANKRD42 protein protein.
Length = 258
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 631 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 476
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 123 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 174
>BC150205-1|AAI50206.1| 825|Homo sapiens KIAA1344 protein.
Length = 825
Score = 30.3 bits (65), Expect = 7.9
Identities = 20/92 (21%), Positives = 40/92 (43%)
Frame = +2
Query: 140 FLSISSDNSFLRIESDLRNIIISPCIKXXXXXXXXXXFHKPQHRSLIQAVFVFGSVIMIY 319
F + S+ ++ DL+NI + K P+HR++++A FV+G+
Sbjct: 131 FALLFSEVKYITNLEDLQNIENALKGKANIIFSYVRAIGIPEHRAVMEAAFVYGTTYQFV 190
Query: 320 YDKE*CLFYWFNSIFNSAIAYFSIIYFNASII 415
E L SI + + Y + +F+ ++
Sbjct: 191 LTTEIAL---LESIGSEDVEYAHLYFFHCKLV 219
>BC142650-1|AAI42651.1| 825|Homo sapiens KIAA1344 protein.
Length = 825
Score = 30.3 bits (65), Expect = 7.9
Identities = 20/92 (21%), Positives = 40/92 (43%)
Frame = +2
Query: 140 FLSISSDNSFLRIESDLRNIIISPCIKXXXXXXXXXXFHKPQHRSLIQAVFVFGSVIMIY 319
F + S+ ++ DL+NI + K P+HR++++A FV+G+
Sbjct: 131 FALLFSEVKYITNLEDLQNIENALKGKANIIFSYVRAIGIPEHRAVMEAAFVYGTTYQFV 190
Query: 320 YDKE*CLFYWFNSIFNSAIAYFSIIYFNASII 415
E L SI + + Y + +F+ ++
Sbjct: 191 LTTEIAL---LESIGSEDVEYAHLYFFHCKLV 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,137,658
Number of Sequences: 237096
Number of extensions: 1346121
Number of successful extensions: 2426
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2426
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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