Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c24r
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 30 2.1
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 30 2.1
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p... 29 3.6
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL032630-1|CAA21558.1| 366|Caenorhabditis elegans Hypothetical ... 29 3.6
AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E... 29 3.6
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 3.6
Z75553-3|CAA99948.1| 407|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80445-6|AAB37797.2| 575|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 28 6.4
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 571 KRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDAADDTGIEID 392
KR L L+ N I+ L + L E +S VC+ L SDAA G+ ID
Sbjct: 217 KREANLVNGLSHNNIVRLLGICLEDPYFGLLLELCEGSSLRNVCRNLNSDAAIPLGVLID 276
Query: 391 -DTKICNG 371
T++ G
Sbjct: 277 WATQVAEG 284
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 571 KRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDAADDTGIEID 392
KR L L+ N I+ L + L E +S VC+ L SDAA G+ ID
Sbjct: 217 KREANLVNGLSHNNIVRLLGICLEDPYFGLLLELCEGSSLRNVCRNLNSDAAIPLGVLID 276
Query: 391 -DTKICNG 371
T++ G
Sbjct: 277 WATQVAEG 284
>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
protein Y49E10.11b protein.
Length = 1089
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = -3
Query: 661 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 482
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 622 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 680
Query: 481 KKLLDEANSFIEVCKEL 431
++ + F+ EL
Sbjct: 681 EETYQKLEQFVARAIEL 697
>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
protein Y49E10.11a protein.
Length = 1139
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = -3
Query: 661 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 482
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 622 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 680
Query: 481 KKLLDEANSFIEVCKEL 431
++ + F+ EL
Sbjct: 681 EETYQKLEQFVARAIEL 697
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = -3
Query: 715 RNTSVQGNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNE 536
+N+ +G IV+ + + + L++WISE ++ E P +W+ + R L L+
Sbjct: 511 QNSCKEGEIVSPQAMA----KTELERWISEPNIAFEEPI-VFWQKAENRTRYPLLFQLS- 564
Query: 535 NEILHKSLSLLTEENLKYKKLL 470
+ +L +LL ENL K L
Sbjct: 565 SIVLCLPGALLNTENLTSAKNL 586
>AL032630-1|CAA21558.1| 366|Caenorhabditis elegans Hypothetical
protein Y62H9A.1 protein.
Length = 366
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 111 FVKQLTTRLHFYQFRPIIHFYELNLTSETLLLAHVSSCI*HSFWFIYFT 257
F L + F++F P + + N+ +L +S +SFWF YFT
Sbjct: 85 FPYHLLLTVGFFRFGPFVTAHLFNICCTLAILCSMSFL--YSFWFNYFT 131
>AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E2
ATPase protein.
Length = 815
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = -3
Query: 661 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 482
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 298 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 356
Query: 481 KKLLDEANSFIEVCKEL 431
++ + F+ EL
Sbjct: 357 EETYQKLEQFVARAIEL 373
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -3
Query: 562 KALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDAADDTGIEIDDTK 383
K LAE E+++L + LL +EN++ K ++ +E S A + T E ++ K
Sbjct: 32 KMLAEEKEEHQLLKDEVVLLRKENVEAKTYSTLLEIMLDEAEEKASSAQETTS-EENNLK 90
Query: 382 ICN 374
I N
Sbjct: 91 ILN 93
>Z75553-3|CAA99948.1| 407|Caenorhabditis elegans Hypothetical
protein ZC443.3 protein.
Length = 407
Score = 28.7 bits (61), Expect = 4.8
Identities = 27/126 (21%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = -3
Query: 739 LVERKAASRNTSVQGNI-VTKKKNS----SKSIQVNLDKWISENDLCLEVPSETYWKVVA 575
L+++K S++++ + + VTKK + +KS+ V DK +L +VP +T +A
Sbjct: 276 LIQKKHQSKSSTEKSMMSVTKKHEAKFKVAKSVTVKKDKTEKSENLKSDVPEKTNEVTIA 335
Query: 574 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDAADDTGIE- 398
+ + E LN ++ K+ ++ + +++ + C + D +D +E
Sbjct: 336 ASLLEDVMEQLNLDD--KKNTKAASQSKIVDDASDSDSHEEFDKCDQDSDDGSDIEELEK 393
Query: 397 IDDTKI 380
I+D +
Sbjct: 394 IEDKDV 399
>U80445-6|AAB37797.2| 575|Caenorhabditis elegans Hypothetical
protein C50F2.1 protein.
Length = 575
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 517 SLSLLTEENLKYKKLLDEANSFIEVC-KELMSDAADD 410
++ L+ EEN Y K + E+ ++++C + ++S+A D
Sbjct: 527 TIKLVVEENKTYVKKIKESELYVDICNRNVLSEAVMD 563
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = -3
Query: 733 ERKAASRNTSVQGNIVTKKKNSSKSIQVNLD---KWISENDLCLEVPSETYWKVVAEKRR 563
E+K + R+++ GN V K SKS+ ++ + ++ V +T K R+
Sbjct: 436 EKKRSRRSSAYSGNSVESKSLESKSLDKEVEPKVRTARKSMAAKSVEPKTLEKDAEPSRK 495
Query: 562 KALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKEL--MSDAADDTGIEI 395
E E KS + EE K K + ++++ V K L DAA +T EI
Sbjct: 496 SESPEKTVEPPA--KSSEEIKEEKKKLK--IRRSSAYFRVAKPLPTSDDAAPETEEEI 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,562,800
Number of Sequences: 27780
Number of extensions: 236701
Number of successful extensions: 673
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -