Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c23f
         (632 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014654-1|AAT27278.1|  217|Drosophila melanogaster RE06042p pro...   280   1e-75
AE014296-2043|AAF50002.2|  217|Drosophila melanogaster CG7283-PA...   280   1e-75
AY113239-1|AAM29244.1|  216|Drosophila melanogaster AT11516p pro...   184   9e-47
AE014297-1926|AAF55120.1|  216|Drosophila melanogaster CG3843-PA...   184   9e-47
BT001825-1|AAN71580.1|  155|Drosophila melanogaster RH43519p pro...   173   2e-43
BT001758-1|AAN71513.1|  150|Drosophila melanogaster RH06366p pro...   146   2e-35
AE014296-2045|AAN12245.1|  140|Drosophila melanogaster CG7283-PC...   146   2e-35
AE014296-2044|AAN12244.1|   57|Drosophila melanogaster CG7283-PB...    95   7e-20
AY051627-1|AAK93051.1|  517|Drosophila melanogaster GH27756p pro...    30   3.0  
AE014298-2517|AAF48693.1|  517|Drosophila melanogaster CG4955-PA...    30   3.0  

>BT014654-1|AAT27278.1|  217|Drosophila melanogaster RE06042p
           protein.
          Length = 217

 Score =  280 bits (686), Expect = 1e-75
 Identities = 142/194 (73%), Positives = 151/194 (77%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60

Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
           PKM+VC+LGDQQHCDEAK  NV  M                           SESLIKQI
Sbjct: 61  PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120

Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
           PRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELA
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELA 180

Query: 590 QNVHLSINFLVSLL 631
           QNV+LSINFLVSLL
Sbjct: 181 QNVNLSINFLVSLL 194


>AE014296-2043|AAF50002.2|  217|Drosophila melanogaster CG7283-PA,
           isoform A protein.
          Length = 217

 Score =  280 bits (686), Expect = 1e-75
 Identities = 142/194 (73%), Positives = 151/194 (77%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60

Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
           PKM+VC+LGDQQHCDEAK  NV  M                           SESLIKQI
Sbjct: 61  PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120

Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
           PRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELA
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELA 180

Query: 590 QNVHLSINFLVSLL 631
           QNV+LSINFLVSLL
Sbjct: 181 QNVNLSINFLVSLL 194


>AY113239-1|AAM29244.1|  216|Drosophila melanogaster AT11516p
           protein.
          Length = 216

 Score =  184 bits (448), Expect = 9e-47
 Identities = 98/194 (50%), Positives = 126/194 (64%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
           M SKVSRDT+Y  V  +L +S+ K  + LETVELQIGL++YDP K KRF G+V L ++  
Sbjct: 1   MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60

Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
           P+++VCV GDQ+HC +AK + V C+                           SES+IKQI
Sbjct: 61  PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120

Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
           PRLLGPGL  AGKF   L+  ESM+ KI ++  T K  MK++ CLSV VGHV M P+ELA
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179

Query: 590 QNVHLSINFLVSLL 631
           +N+ +SINFLVSLL
Sbjct: 180 RNIAISINFLVSLL 193


>AE014297-1926|AAF55120.1|  216|Drosophila melanogaster CG3843-PA
           protein.
          Length = 216

 Score =  184 bits (448), Expect = 9e-47
 Identities = 98/194 (50%), Positives = 126/194 (64%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
           M SKVSRDT+Y  V  +L +S+ K  + LETVELQIGL++YDP K KRF G+V L ++  
Sbjct: 1   MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60

Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
           P+++VCV GDQ+HC +AK + V C+                           SES+IKQI
Sbjct: 61  PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120

Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
           PRLLGPGL  AGKF   L+  ESM+ KI ++  T K  MK++ CLSV VGHV M P+ELA
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179

Query: 590 QNVHLSINFLVSLL 631
           +N+ +SINFLVSLL
Sbjct: 180 RNIAISINFLVSLL 193


>BT001825-1|AAN71580.1|  155|Drosophila melanogaster RH43519p
           protein.
          Length = 155

 Score =  173 bits (421), Expect = 2e-43
 Identities = 90/132 (68%), Positives = 94/132 (71%)
 Frame = +2

Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
           M+VC+LGDQQHCDEAK  NV  M                           SESLIKQIPR
Sbjct: 1   MKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPR 60

Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 595
           LLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELAQN
Sbjct: 61  LLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQN 120

Query: 596 VHLSINFLVSLL 631
           V+LSINFLVSLL
Sbjct: 121 VNLSINFLVSLL 132


>BT001758-1|AAN71513.1|  150|Drosophila melanogaster RH06366p
           protein.
          Length = 150

 Score =  146 bits (354), Expect = 2e-35
 Identities = 73/82 (89%), Positives = 75/82 (91%)
 Frame = +2

Query: 386 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 565
           SESLIKQIPRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV
Sbjct: 46  SESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHV 105

Query: 566 DMTPDELAQNVHLSINFLVSLL 631
            M  DELAQNV+LSINFLVSLL
Sbjct: 106 GMKSDELAQNVNLSINFLVSLL 127



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYD 175
           M+SKVSRDTLYE VN +L++S  KK N  + +  ++  K+YD
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKLNKNKKLVKKLA-KSYD 41


>AE014296-2045|AAN12245.1|  140|Drosophila melanogaster CG7283-PC,
           isoform C protein.
          Length = 140

 Score =  146 bits (354), Expect = 2e-35
 Identities = 73/82 (89%), Positives = 75/82 (91%)
 Frame = +2

Query: 386 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 565
           SESLIKQIPRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV
Sbjct: 36  SESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHV 95

Query: 566 DMTPDELAQNVHLSINFLVSLL 631
            M  DELAQNV+LSINFLVSLL
Sbjct: 96  GMKSDELAQNVNLSINFLVSLL 117


>AE014296-2044|AAN12244.1|   57|Drosophila melanogaster CG7283-PB,
           isoform B protein.
          Length = 57

 Score = 95.1 bits (226), Expect = 7e-20
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 211
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVK
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVK 54


>AY051627-1|AAK93051.1|  517|Drosophila melanogaster GH27756p
           protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 379 ESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNAN 242
           E + FF  FL ++  ++ FF   +I  W   G+ +V +L+  KNA+
Sbjct: 339 EQLNFFITFLLEVLGVLVFFAICTITFWITLGYHVVQLLVDLKNAD 384


>AE014298-2517|AAF48693.1|  517|Drosophila melanogaster CG4955-PA
           protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 379 ESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNAN 242
           E + FF  FL ++  ++ FF   +I  W   G+ +V +L+  KNA+
Sbjct: 339 EQLNFFITFLLEVLGVLVFFAICTITFWITLGYHVVQLLVDLKNAD 384


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,307,528
Number of Sequences: 53049
Number of extensions: 607601
Number of successful extensions: 1494
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)