Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c21r
         (764 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me...    29   5.3  
BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p pro...    29   5.3  
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ...    29   5.3  
AY047577-1|AAK77309.1|  357|Drosophila melanogaster GH08848p pro...    29   7.0  
AF215861-1|AAF32288.1|  534|Drosophila melanogaster Myt1 kinase-...    29   7.0  
AE014296-1005|AAF50747.3|  533|Drosophila melanogaster CG32417-P...    29   7.0  

>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
            D.melanogaster alpha-spectrin mRNA, complete cds. ).
          Length = 2415

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
 Frame = -2

Query: 703  RREKGVYEVDLNLNTTVKILDKGRDLCYDDDSTIYVASNDGIY-VYKTGDKSFKKYGTFK 527
            + E  V +++   NT   + ++ ++    +   + +   + +  +Y   +KS ++    K
Sbjct: 934  KHEALVSDLEAFGNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSMKK 993

Query: 526  ADVISLTKMNGSDLFYAVTNDNKAYKVTENGNKYVLDDKLKAVKQVMFDNFNV 368
             DV++L   N  D +    ND + +       K  +D  L A +Q + DN ++
Sbjct: 994  GDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKK--IDAGLSASQQNLVDNHSI 1044


>BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p protein.
          Length = 1557

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
 Frame = -2

Query: 703  RREKGVYEVDLNLNTTVKILDKGRDLCYDDDSTIYVASNDGIY-VYKTGDKSFKKYGTFK 527
            + E  V +++   NT   + ++ ++    +   + +   + +  +Y   +KS ++    K
Sbjct: 934  KHEALVSDLEAFGNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSMKK 993

Query: 526  ADVISLTKMNGSDLFYAVTNDNKAYKVTENGNKYVLDDKLKAVKQVMFDNFNV 368
             DV++L   N  D +    ND + +       K  +D  L A +Q + DN ++
Sbjct: 994  GDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKK--IDAGLSASQQNLVDNHSI 1044


>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
            protein.
          Length = 2415

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
 Frame = -2

Query: 703  RREKGVYEVDLNLNTTVKILDKGRDLCYDDDSTIYVASNDGIY-VYKTGDKSFKKYGTFK 527
            + E  V +++   NT   + ++ ++    +   + +   + +  +Y   +KS ++    K
Sbjct: 934  KHEALVSDLEAFGNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSMKK 993

Query: 526  ADVISLTKMNGSDLFYAVTNDNKAYKVTENGNKYVLDDKLKAVKQVMFDNFNV 368
             DV++L   N  D +    ND + +       K  +D  L A +Q + DN ++
Sbjct: 994  GDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKK--IDAGLSASQQNLVDNHSI 1044


>AY047577-1|AAK77309.1|  357|Drosophila melanogaster GH08848p
           protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -2

Query: 460 KAYKVTENGNKYVLDDKLKAVKQVMFDNFNVLHY-VTLDNEVF-KVKETMEKIDFNVKID 287
           +  ++ E    ++L D L+ +K +   + N++H  + LDN +  +  ET +  DF + ID
Sbjct: 16  RCQRIPEERIWHILLDLLRGLKSL--HDRNLIHLDIKLDNVLIGEDDETCKLADFGLVID 73

Query: 286 YVRLLKSSATEDDALFL 236
             R     ATE D+ ++
Sbjct: 74  VDRANSHHATEGDSRYM 90


>AF215861-1|AAF32288.1|  534|Drosophila melanogaster Myt1
           kinase-like protein protein.
          Length = 534

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -2

Query: 460 KAYKVTENGNKYVLDDKLKAVKQVMFDNFNVLHY-VTLDNEVF-KVKETMEKIDFNVKID 287
           +  ++ E    ++L D L+ +K +   + N++H  + LDN +  +  ET +  DF + ID
Sbjct: 192 RCQRIPEERIWHILLDLLRGLKSL--HDRNLIHLDIKLDNVLIGEDDETCKLADFGLVID 249

Query: 286 YVRLLKSSATEDDALFL 236
             R     ATE D+ ++
Sbjct: 250 VDRANSHHATEGDSRYM 266


>AE014296-1005|AAF50747.3|  533|Drosophila melanogaster CG32417-PA
           protein.
          Length = 533

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -2

Query: 460 KAYKVTENGNKYVLDDKLKAVKQVMFDNFNVLHY-VTLDNEVF-KVKETMEKIDFNVKID 287
           +  ++ E    ++L D L+ +K +   + N++H  + LDN +  +  ET +  DF + ID
Sbjct: 192 RCQRIPEERIWHILLDLLRGLKSL--HDRNLIHLDIKLDNVLIGEDDETCKLADFGLVID 249

Query: 286 YVRLLKSSATEDDALFL 236
             R     ATE D+ ++
Sbjct: 250 VDRANSHHATEGDSRYM 266


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,323,901
Number of Sequences: 53049
Number of extensions: 552867
Number of successful extensions: 1800
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)