Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c21r
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical...    31   0.90 
AC006832-6|AAY55905.1|  170|Caenorhabditis elegans Hypothetical ...    29   2.7  
AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U97009-10|AAC69033.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   6.3  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    28   6.3  
U55364-14|AAA97979.1|  210|Caenorhabditis elegans Hypothetical p...    28   8.4  
AF068709-10|AAC19252.2|  345|Caenorhabditis elegans Seven tm rec...    28   8.4  
AF016676-5|AAG24100.1|  473|Caenorhabditis elegans Cytochrome p4...    28   8.4  

>AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.12a protein.
          Length = 480

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 20/70 (28%), Positives = 37/70 (52%)
 Frame = +3

Query: 399 TAFNLSSKTYLLPFSVTL*ALLSFVTA*NKSLPFIFVRLITSALKVPYFLKLLSPVLYTY 578
           T    + +   L F +T+  L  F+   N +LP+IF+       +  Y+LK ++ V++  
Sbjct: 18  TLTGCAQRELFLTFLITMLGL--FIR--NLTLPWIFLGRRYDTGRFTYWLKFVADVIFLC 73

Query: 579 IPSLLATYIV 608
           +PSLLA  ++
Sbjct: 74  VPSLLAMTVL 83


>AC006832-6|AAY55905.1|  170|Caenorhabditis elegans Hypothetical
           protein ZK355.7 protein.
          Length = 170

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
 Frame = -2

Query: 748 SDGXIYTIHA----DVNDNRREKGVYEVDLNLNTTVKILDKGRDLCYDDDSTIYVASNDG 581
           S   +  IHA     +N++R    +Y  +L     +  L    D  + D   + V  NDG
Sbjct: 5   SKSKVQNIHARYCESLNESRPIYPIYFFNLCYYEKLSTLADDCDAIFGD---VVVDVNDG 61

Query: 580 IYVYKTGDKSFKKYGTFKADVISLTKMNGSD----LFYAVTNDNKAYKVTENGNKYVLDD 413
            Y+YK        +G+ K   I  TK+ G D    L +  + D     V    N Y+   
Sbjct: 62  RYLYKFFGVG-NIFGSLK---IQYTKIEGLDFLLGLDFVGSLDASQTPVLIRSNNYLKQA 117

Query: 412 KLKAVKQVMFDNFNVLHYVTLDNEVFKVKETMEKIDFNVKIDY 284
            L     +  +N  ++ Y      +   +  M +IDF++K+DY
Sbjct: 118 FLLLNNIISANNDQLVMYDNPSLFLNNQQCLMYQIDFDIKMDY 160


>AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical
           protein Y50D4B.4 protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +2

Query: 287 IDFNIKIDFFHSLFHFKYFIIQSDIVQYIEVIKHNLFDGFQFIIQNVFVTIF 442
           I FN KI FF++ FH  Y  I  D  + I++ K  L D  +  ++NV V ++
Sbjct: 376 IPFNGKITFFNNAFHRLYLNITLD--EDIQIFKTKLDD--EGSLENVSVEVY 423


>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/55 (34%), Positives = 32/55 (58%)
 Frame = +3

Query: 309 IFSIVSFTLNTSLSKVT*CNTLKLSNITCLTAFNLSSKTYLLPFSVTL*ALLSFV 473
           ++ ++ F +NT  + +T   TLKLS++TC T   LSS   +L  + TL  + S +
Sbjct: 38  VWYLLDFLMNTLTTGIT-FYTLKLSSVTCQTC-ALSSIYLMLENNFTLNIMYSLM 90


>Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical
           protein T03F7.5 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 473 YGVKQIASVHFC*AYNVSFESTIFFKAF-ISGFIYIYPVIASYVYRAVII 619
           + ++++ S+ F        + T+FFK F ++GF++      SYVY  VI+
Sbjct: 54  FTIERVLSIQFS-----KIQRTLFFKLFFLAGFVFENGFAISYVYTNVIL 98


>U97009-10|AAC69033.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein11 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +2

Query: 317 HSLFHFKYFIIQSDIVQYIEV--IKHNLFDGFQFIIQNVFVTIFSDFVSFIVVCYGVKQI 490
           H  F  K+  ++S I +  +V  I H   D   F+I   FV+I + ++SF +VC  + +I
Sbjct: 469 HLEFAIKFPNLRSQIPEINQVGPIAHYYLDVIVFLI---FVSIITAYISFQIVCRILSRI 525

Query: 491 AS 496
            S
Sbjct: 526 LS 527


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +2

Query: 416 IQNVFVTIFSDFVSFIVVCYGVKQIASVHFC*AYNVSFES--TIFFKAFISGFIYIYPVI 589
           I N F+T++S    F +  +      SV F   Y   F+S  T FF+ F  G   +YP++
Sbjct: 86  ISNAFITVWS---CFYLTTFS---FISVLFIYRYLCLFDSSKTRFFEGFKGGLWMLYPLL 139

Query: 590 ASYVYRAVI 616
               Y + I
Sbjct: 140 PGICYASTI 148


>U55364-14|AAA97979.1|  210|Caenorhabditis elegans Hypothetical
           protein F21C10.1 protein.
          Length = 210

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 481 YAVTNDNKAYKVTENGN--KYVLDDKLKAVKQVMFDN 377
           ++ + + K Y +T   N   Y++D K + + +V+FDN
Sbjct: 60  FSYSEETKMYVITSPDNPLNYIIDSKSEELNKVIFDN 96


>AF068709-10|AAC19252.2|  345|Caenorhabditis elegans Seven tm
           receptor protein 33 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
 Frame = +2

Query: 245 GVIFSCAR-LQEPNVIDFNIKIDFF---HSLFHFKYFIIQSDIVQYIEVIKHNL-FDGFQ 409
           G+IFSC   L  P V +FN    +F   + L  FK  ++Q  +V Y  +    + F   Q
Sbjct: 53  GLIFSCTEMLARPFVHNFNASFVYFSLSNDLSEFKS-LVQMLLVLYSGLYSSLISFVAVQ 111

Query: 410 FIIQ-------NVFVTIFSD----FVSFIVVCYGVKQIASVHFC 508
           FI +       N+  + F+     F  F V+ +G    ASV+FC
Sbjct: 112 FIYRYMVLVNANLLESWFTGWKLVFWVFYVIFFGFAWSASVYFC 155


>AF016676-5|AAG24100.1|  473|Caenorhabditis elegans Cytochrome p450
           family protein 33C7 protein.
          Length = 473

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 153 LRKPIHCLYTRWIKKFTDLYRFCM 82
           L KP +  + RW K+F DLY F M
Sbjct: 43  LEKPGYECFRRWNKQFGDLYTFWM 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,367,147
Number of Sequences: 27780
Number of extensions: 319005
Number of successful extensions: 1082
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)