Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c21f
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           30   0.015
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   4.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.1  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   5.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   7.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   7.1  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 30.3 bits (65), Expect = 0.015
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 326 YDDDSTIYVASND-GIYVYKTGDKSFKKYGTFKADVISLTKMNGSDLFYAVTNDNKAY 496
           ++ D  ++V SN   +Y+Y + D S   Y  FKA+V    K    D  Y V +    Y
Sbjct: 491 HEYDQNVWVLSNKLAMYLYGSIDSSKINYRIFKANVKEAVKDTXCDPNYVVPDSEHGY 548


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 509 NGNKYVLDDKLKAVKQVMFDNFNVL 583
           NGN  V D+ +++  + M   FNV+
Sbjct: 49  NGNVNVEDENVQSYVECMMKKFNVV 73


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 65  LIFVVGLSVTASKVLNGSVFRQRSVELYS 151
           ++FVVGL   A +++    ++Q    LYS
Sbjct: 27  MVFVVGLERVAEELMGRRRWKQYQDTLYS 55


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 279 FKSTSYTPFSLRLSLTSACIVYILPSLFSALDITK 175
           F + S  P +  +S  +   +Y+ PS   +LD+ K
Sbjct: 116 FSTCSSHPTAAFISYGTLFFIYVQPSATFSLDLNK 150


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 279 FKSTSYTPFSLRLSLTSACIVYILPSLFSALDITK 175
           F + S  P +  +S  +   +Y+ PS   +LD+ K
Sbjct: 117 FSTCSSHPTAAFISYGTLFFIYVHPSATFSLDLNK 151


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 49  HLGHPVSFSENVH 11
           H G P+S S+N H
Sbjct: 545 HQGRPISISKNQH 557


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -2

Query: 591 T*CNTLKLSNITCLTAFNLSSKTYLLP 511
           T C T   S  T    F  SSK Y  P
Sbjct: 199 TCCTTXWWSXXTVAXTFKYSSKPYXFP 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,547
Number of Sequences: 438
Number of extensions: 3285
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)