Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c19f
(596 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY084185-1|AAL89923.1| 224|Drosophila melanogaster RE67583p pro... 75 1e-13
AF276505-1|AAF85707.1| 224|Drosophila melanogaster neural Lazar... 75 1e-13
AE014134-249|AAF51378.2| 224|Drosophila melanogaster CG33126-PA... 75 1e-13
AY070838-1|AAL48460.2| 227|Drosophila melanogaster GH09946p pro... 56 5e-08
AF276506-1|AAF85708.1| 212|Drosophila melanogaster glial Lazari... 56 5e-08
AE013599-1646|AAF58418.1| 212|Drosophila melanogaster CG4604-PA... 56 5e-08
AE014297-2056|AAN13668.1| 219|Drosophila melanogaster CG14872-P... 38 0.008
BT025827-1|ABF85727.1| 175|Drosophila melanogaster IP07407p pro... 35 0.073
AE014134-248|AAN10468.1| 192|Drosophila melanogaster CG31659-PA... 35 0.073
U07629-1|AAA21249.2| 1494|Drosophila melanogaster beta-heavy-spe... 29 6.3
BT029937-1|ABM92811.1| 1032|Drosophila melanogaster IP15889p pro... 29 6.3
AY376405-1|AAQ84039.1| 947|Drosophila melanogaster guanylyl cyc... 29 6.3
AY376404-1|AAQ84038.1| 941|Drosophila melanogaster guanylyl cyc... 29 6.3
AY119626-1|AAM50280.1| 1025|Drosophila melanogaster LP04011p pro... 29 6.3
AE014297-1945|AAF55135.4| 940|Drosophila melanogaster CG4154-PA... 29 6.3
AE014297-1944|AAN13628.3| 947|Drosophila melanogaster CG4154-PC... 29 6.3
AE014297-1943|ABI31167.1| 1097|Drosophila melanogaster CG4154-PD... 29 6.3
AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA... 29 6.3
AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB... 29 6.3
AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC... 29 6.3
BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p pro... 28 8.4
BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p pro... 28 8.4
AE014297-2055|AAF55206.1| 310|Drosophila melanogaster CG14872-P... 28 8.4
AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-P... 28 8.4
>AY084185-1|AAL89923.1| 224|Drosophila melanogaster RE67583p
protein.
Length = 224
Score = 74.5 bits (175), Expect = 1e-13
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Frame = +2
Query: 98 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 274
+V G CP++K ++ F+ AY G+WYE + +P E KC A Y L + V V N
Sbjct: 26 QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVNA 85
Query: 275 HI--IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCK 448
I G + G AK+ +L V F + + VL TDY +YA+ Y+C
Sbjct: 86 AINRFTGQPSNVTGQAKVLG----PGQLAVAFYPTQPLTKANYLVLGTDYESYAVVYSCT 141
Query: 449 YDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHT 592
+ ++ VWIL+R ++ +A A ++++ ++ + L+ T
Sbjct: 142 SVTPLANFKI-VWILTRQREPSAEAVDAARKILEDN--DVSQAFLIDT 186
>AF276505-1|AAF85707.1| 224|Drosophila melanogaster neural
Lazarillo protein.
Length = 224
Score = 74.5 bits (175), Expect = 1e-13
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Frame = +2
Query: 98 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 274
+V G CP++K ++ F+ AY G+WYE + +P E KC A Y L + V V N
Sbjct: 26 QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVNA 85
Query: 275 HI--IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCK 448
I G + G AK+ +L V F + + VL TDY +YA+ Y+C
Sbjct: 86 AINRFTGQPSNVTGQAKVLG----PGQLAVAFYPTQPLTKANYLVLGTDYESYAVVYSCT 141
Query: 449 YDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHT 592
+ ++ VWIL+R ++ +A A ++++ ++ + L+ T
Sbjct: 142 SVTPLANFKI-VWILTRQREPSAEAVDAARKILEDN--DVSQAFLIDT 186
>AE014134-249|AAF51378.2| 224|Drosophila melanogaster CG33126-PA
protein.
Length = 224
Score = 74.5 bits (175), Expect = 1e-13
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Frame = +2
Query: 98 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 274
+V G CP++K ++ F+ AY G+WYE + +P E KC A Y L + V V N
Sbjct: 26 QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVNA 85
Query: 275 HI--IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCK 448
I G + G AK+ +L V F + + VL TDY +YA+ Y+C
Sbjct: 86 AINRFTGQPSNVTGQAKVLG----PGQLAVAFYPTQPLTKANYLVLGTDYESYAVVYSCT 141
Query: 449 YDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHT 592
+ ++ VWIL+R ++ +A A ++++ ++ + L+ T
Sbjct: 142 SVTPLANFKI-VWILTRQREPSAEAVDAARKILEDN--DVSQAFLIDT 186
>AY070838-1|AAL48460.2| 227|Drosophila melanogaster GH09946p
protein.
Length = 227
Score = 55.6 bits (128), Expect = 5e-08
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Frame = +2
Query: 113 GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL--EGD---------VV 259
G CP + FN++ G WYE+ + E C++ +++ +G+ V
Sbjct: 46 GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAV 105
Query: 260 KVKNVHIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGE-ISR----DGSVQVLATDYNN 424
+KN++ I G G A + + T +F + I+R G QVL TDY N
Sbjct: 106 AIKNINRITGNPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLLPGSGKYQVLYTDYEN 165
Query: 425 YAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLV 586
+AI ++C H +WIL R++ E D ++ V + +K S +D +L+
Sbjct: 166 FAILWSCG-SIGSLGHSDQIWILGRDRDFEVDIRSKVYDVLKRLS--LDPERLI 216
>AF276506-1|AAF85708.1| 212|Drosophila melanogaster glial Lazarillo
protein.
Length = 212
Score = 55.6 bits (128), Expect = 5e-08
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Frame = +2
Query: 113 GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL--EGD---------VV 259
G CP + FN++ G WYE+ + E C++ +++ +G+ V
Sbjct: 31 GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNSKLAV 90
Query: 260 KVKNVHIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGE-ISR----DGSVQVLATDYNN 424
+KN++ I G G A + + T +F + I+R G QVL TDY N
Sbjct: 91 AIKNINRITGNPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLLPGSGKYQVLYTDYEN 150
Query: 425 YAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLV 586
+AI ++C H +WIL R++ E D ++ V + +K S +D +L+
Sbjct: 151 FAILWSCG-SIGSLGHSDQIWILGRDRDFEVDIRSKVYDVLKRLS--LDPERLI 201
>AE013599-1646|AAF58418.1| 212|Drosophila melanogaster CG4604-PA
protein.
Length = 212
Score = 55.6 bits (128), Expect = 5e-08
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Frame = +2
Query: 113 GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL--EGD---------VV 259
G CP + FN++ G WYE+ + E C++ +++ +G+ V
Sbjct: 31 GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAV 90
Query: 260 KVKNVHIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGE-ISR----DGSVQVLATDYNN 424
+KN++ I G G A + + T +F + I+R G QVL TDY N
Sbjct: 91 AIKNINRITGNPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLLPGSGKYQVLYTDYEN 150
Query: 425 YAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLV 586
+AI ++C H +WIL R++ E D ++ V + +K S +D +L+
Sbjct: 151 FAILWSCG-SIGSLGHSDQIWILGRDRDFEVDIRSKVYDVLKRLS--LDPERLI 201
>AE014297-2056|AAN13668.1| 219|Drosophila melanogaster CG14872-PA,
isoform A protein.
Length = 219
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/103 (26%), Positives = 47/103 (45%)
Frame = +2
Query: 143 NFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKLEGDVVKVKNVHIIDGVKKYIEGTAKL 322
NFNLT G WYE ++ PN S ++E D++ + +++ I V + T +
Sbjct: 47 NFNLTQLSGYWYEAARVPNVQVLECLNVSVPAEIENDILSL-DLNFISTVNNGWQFTEES 105
Query: 323 TDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 451
+ T FK + + +++ TDY N IA+ C +
Sbjct: 106 VEFPWNEDTQTGIFKLDYDTVTVTYKLMLTDYEN--IAFVCGF 146
>BT025827-1|ABF85727.1| 175|Drosophila melanogaster IP07407p
protein.
Length = 175
Score = 35.1 bits (77), Expect = 0.073
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Frame = +2
Query: 113 GTCPE-LKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEY--KLEGDV-VKVKNVHI 280
G CP + V + ++ ++G WY S +P+ S + KC S ++ K E V + ++
Sbjct: 8 GACPSNMTAVGDLDMDRFKGKWYTHSIYPHLSLRVEKCQSTDFIEKEENKFSVVARELNT 67
Query: 281 IDG-VKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKYDD 457
G VK + + + T + F E + VL TDY N+AI + C +D
Sbjct: 68 QTGTVKMRKADILNVEPEFGRYVLGTTSTAFPE---GVLMYVLDTDYVNFAIRFMC-FDA 123
Query: 458 KKKSHQVFVWILSRNKK 508
K F W + + +K
Sbjct: 124 SKIFS--FHWAVIQTRK 138
>AE014134-248|AAN10468.1| 192|Drosophila melanogaster CG31659-PA
protein.
Length = 192
Score = 35.1 bits (77), Expect = 0.073
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Frame = +2
Query: 113 GTCPE-LKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEY--KLEGDV-VKVKNVHI 280
G CP + V + ++ ++G WY S +P+ S + KC S ++ K E V + ++
Sbjct: 25 GACPSNMTAVGDLDMDRFKGKWYTHSIYPHLSLRVEKCQSTDFIEKEENKFSVVARELNT 84
Query: 281 IDG-VKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKYDD 457
G VK + + + T + F E + VL TDY N+AI + C +D
Sbjct: 85 QTGTVKMRKADILNVEPEFGRYVLGTTSTAFPE---GVLMYVLDTDYVNFAIRFMC-FDA 140
Query: 458 KKKSHQVFVWILSRNKK 508
K F W + + +K
Sbjct: 141 SKIFS--FHWAVIQTRK 155
>U07629-1|AAA21249.2| 1494|Drosophila melanogaster
beta-heavy-spectrin protein.
Length = 1494
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 458 KKKSHQVFVWILSRNKKLE----GDAKTAVDNFIKEHSKEIDSSKLVHTD 595
K + QV +W+ ++ L GD+ TAV+ +K+H + KL+H D
Sbjct: 77 KAQVEQVEIWLANKEAFLNNDDLGDSYTAVERLLKKHD---EFEKLLHAD 123
>BT029937-1|ABM92811.1| 1032|Drosophila melanogaster IP15889p
protein.
Length = 1032
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 337 IGVVGELGRPFY---ILLDAVDDMHVLDLHHVTFQFVFS*RAFAV 212
+G + E+ R FY + ++ V + + D HVTFQ F RAF +
Sbjct: 80 MGQIREVARYFYHKEMHIELVREEILFDTVHVTFQLTFDNRAFTL 124
>AY376405-1|AAQ84039.1| 947|Drosophila melanogaster guanylyl
cyclase long variant protein.
Length = 947
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 337 IGVVGELGRPFY---ILLDAVDDMHVLDLHHVTFQFVFS*RAFAV 212
+G + E+ R FY + ++ V + + D HVTFQ F RAF +
Sbjct: 145 MGQIREVARYFYHKEMHIELVREEILFDTVHVTFQLTFDNRAFTL 189
>AY376404-1|AAQ84038.1| 941|Drosophila melanogaster guanylyl
cyclase short variant protein.
Length = 941
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 337 IGVVGELGRPFY---ILLDAVDDMHVLDLHHVTFQFVFS*RAFAV 212
+G + E+ R FY + ++ V + + D HVTFQ F RAF +
Sbjct: 145 MGQIREVARYFYHKEMHIELVREEILFDTVHVTFQLTFDNRAFTL 189
>AY119626-1|AAM50280.1| 1025|Drosophila melanogaster LP04011p
protein.
Length = 1025
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 458 KKKSHQVFVWILSRNKKLE----GDAKTAVDNFIKEHSKEIDSSKLVHTD 595
K + QV +W+ ++ L GD+ TAV+ +K+H + KL+H D
Sbjct: 308 KAQVEQVEIWLANKEAFLNNDDLGDSYTAVERLLKKHD---EFEKLLHAD 354
>AE014297-1945|AAF55135.4| 940|Drosophila melanogaster CG4154-PA,
isoform A protein.
Length = 940
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 337 IGVVGELGRPFY---ILLDAVDDMHVLDLHHVTFQFVFS*RAFAV 212
+G + E+ R FY + ++ V + + D HVTFQ F RAF +
Sbjct: 145 MGQIREVARYFYHKEMHIELVREEILFDTVHVTFQLTFDNRAFTL 189
>AE014297-1944|AAN13628.3| 947|Drosophila melanogaster CG4154-PC,
isoform C protein.
Length = 947
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 337 IGVVGELGRPFY---ILLDAVDDMHVLDLHHVTFQFVFS*RAFAV 212
+G + E+ R FY + ++ V + + D HVTFQ F RAF +
Sbjct: 145 MGQIREVARYFYHKEMHIELVREEILFDTVHVTFQLTFDNRAFTL 189
>AE014297-1943|ABI31167.1| 1097|Drosophila melanogaster CG4154-PD,
isoform D protein.
Length = 1097
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 337 IGVVGELGRPFY---ILLDAVDDMHVLDLHHVTFQFVFS*RAFAV 212
+G + E+ R FY + ++ V + + D HVTFQ F RAF +
Sbjct: 145 MGQIREVARYFYHKEMHIELVREEILFDTVHVTFQLTFDNRAFTL 189
>AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA,
isoform A protein.
Length = 4097
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 458 KKKSHQVFVWILSRNKKLE----GDAKTAVDNFIKEHSKEIDSSKLVHTD 595
K + QV +W+ ++ L GD+ TAV+ +K+H + KL+H D
Sbjct: 2680 KAQVEQVEIWLANKEAFLNNDDLGDSYTAVERLLKKHD---EFEKLLHAD 2726
>AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB,
isoform B protein.
Length = 4118
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 458 KKKSHQVFVWILSRNKKLE----GDAKTAVDNFIKEHSKEIDSSKLVHTD 595
K + QV +W+ ++ L GD+ TAV+ +K+H + KL+H D
Sbjct: 2680 KAQVEQVEIWLANKEAFLNNDDLGDSYTAVERLLKKHD---EFEKLLHAD 2726
>AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC,
isoform C protein.
Length = 4207
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 458 KKKSHQVFVWILSRNKKLE----GDAKTAVDNFIKEHSKEIDSSKLVHTD 595
K + QV +W+ ++ L GD+ TAV+ +K+H + KL+H D
Sbjct: 2680 KAQVEQVEIWLANKEAFLNNDDLGDSYTAVERLLKKHD---EFEKLLHAD 2726
>BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p
protein.
Length = 613
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 417 IITTPSLTTANTMTRKSLIKCSSG--SSLETRSLKATLKLLSIISSRNTPK 563
+ +T ++TT + R +K + SS+ET+ L L +++++R TPK
Sbjct: 352 VYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHLKNLVTTRETPK 402
>BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p
protein.
Length = 613
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 417 IITTPSLTTANTMTRKSLIKCSSG--SSLETRSLKATLKLLSIISSRNTPK 563
+ +T ++TT + R +K + SS+ET+ L L +++++R TPK
Sbjct: 352 VYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHLKNLVTTRETPK 402
>AE014297-2055|AAF55206.1| 310|Drosophila melanogaster CG14872-PB,
isoform B protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = +2
Query: 167 GIWYEISKFPNESEKNGKCSSAEYKLEGDVVKVKNVHIIDGVKKYIEGTAKLTDDANKAA 346
G WYE ++ PN S ++E D++ + +++ I V + T + +
Sbjct: 146 GYWYEAARVPNVQVLECLNVSVPAEIENDILSL-DLNFISTVNNGWQFTEESVEFPWNED 204
Query: 347 KLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 451
T FK + + +++ TDY N IA+ C +
Sbjct: 205 TQTGIFKLDYDTVTVTYKLMLTDYEN--IAFVCGF 237
>AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-PA
protein.
Length = 584
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 417 IITTPSLTTANTMTRKSLIKCSSG--SSLETRSLKATLKLLSIISSRNTPK 563
+ +T ++TT + R +K + SS+ET+ L L +++++R TPK
Sbjct: 323 VYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHLKNLVTTRETPK 373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,545,604
Number of Sequences: 53049
Number of extensions: 446100
Number of successful extensions: 1477
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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