SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c18r
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo...   361   8e-99
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo...   328   9e-89
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi...   301   1e-80
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo...   271   8e-72
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full...   271   1e-71
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot...   239   5e-62
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo...   221   1e-56
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ...   189   6e-47
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;...   150   2e-35
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard...   134   1e-30
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j...   119   7e-26
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ...   116   7e-25
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb...   115   1e-24
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz...   104   2e-21
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol...    95   1e-18
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella...    77   4e-13
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea...    68   2e-10
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea...    66   7e-10
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc...    62   9e-09
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen...    61   2e-08
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea...    57   3e-07
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc...    56   6e-07
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea...    56   7e-07
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano...    54   4e-06
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu...    51   2e-05
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote...    50   4e-05
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano...    50   4e-05
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano...    48   1e-04
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea...    46   8e-04
UniRef50_A1RX37 Cluster: Ribosomal protein S8e; n=1; Thermofilum...    39   0.12 
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:...    38   0.28 
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ...    37   0.48 
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;...    33   6.0  
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ...    33   6.0  
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi...    33   7.9  
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja...    33   7.9  
UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2; Meth...    33   7.9  
UniRef50_A5V4W5 Cluster: TonB-dependent receptor precursor; n=1;...    33   7.9  
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
           Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
           (Human)
          Length = 208

 Score =  361 bits (888), Expect = 8e-99
 Identities = 163/208 (78%), Positives = 184/208 (88%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGISRD+WHKRR TGGKR P  KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1   MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 265
           D GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LP
Sbjct: 61  DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120

Query: 264 LGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 85
           LGRKKGAKLT  EE I+NKKRS+K  +KY  R++ AK+   LEEQF  G+LLAC+ASRPG
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180

Query: 84  QCGRADGYILEGKELEFYLRKIKSKRAK 1
           QCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 181 QCGRADGYVLEGKELEFYLRKIKARKGK 208


>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
           Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
           melanogaster (Fruit fly)
          Length = 208

 Score =  328 bits (805), Expect = 9e-89
 Identities = 152/208 (73%), Positives = 178/208 (85%), Gaps = 2/208 (0%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGISRD  HKRRATGGKR  +RKKRK+ELGRPAANT+LG  R+H VR+RGGNTK RALRL
Sbjct: 1   MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 265
           +TGNF+W SE   RKTRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LP
Sbjct: 61  ETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLP 120

Query: 264 LGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASR 91
           LGRK+  K  + E+   ++ KKRS+K  +KYL RQ+  KVE ALE+QF +GR+LAC++SR
Sbjct: 121 LGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSR 180

Query: 90  PGQCGRADGYILEGKELEFYLRKIKSKR 7
           PGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 181 PGQCGRSDGYILEGKELEFYLKKIKSKK 208


>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
           Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
           (Human)
          Length = 188

 Score =  301 bits (738), Expect = 1e-80
 Identities = 146/208 (70%), Positives = 167/208 (80%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGISRD+WHKRR TGGKR P  KKRKYELGRPAANT++GP+RIH+VR RGG         
Sbjct: 1   MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG--------- 51

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 265
                     C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LP
Sbjct: 52  ----------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 100

Query: 264 LGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 85
           LGRKKGAKLT  EE I+NKKRS+K  +KY  R++ AK+   LEEQF  G+LLAC+ASRPG
Sbjct: 101 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 160

Query: 84  QCGRADGYILEGKELEFYLRKIKSKRAK 1
           QCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 161 QCGRADGYVLEGKELEFYLRKIKARKGK 188


>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
           Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
           (Maize)
          Length = 221

 Score =  271 bits (665), Expect = 8e-72
 Identities = 135/217 (62%), Positives = 162/217 (74%), Gaps = 9/217 (4%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALR 448
           MGISRD  HKRRATGGK+   RKKRKYELGR  ANT+L   + +  VR RGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 447 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 268
           LDTGN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY +
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 267 PLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRL 112
            +GRKK         A+  E E A    K+S    RK   R+    ++  +EEQF +GRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 111 LACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 1
           LAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217


>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
           full-length enriched library, clone:I830031J02
           product:ribosomal protein S8, full insert sequence; n=9;
           Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
           full-length enriched library, clone:I830031J02
           product:ribosomal protein S8, full insert sequence - Mus
           musculus (Mouse)
          Length = 152

 Score =  271 bits (664), Expect = 1e-71
 Identities = 122/149 (81%), Positives = 134/149 (89%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGISRD+WHKRR TGGKR P  KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1   MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 265
           D GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LP
Sbjct: 61  DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120

Query: 264 LGRKKGAKLTEAEEAIINKKRSQKTARKY 178
           LGRKKGAKLT  EE I+NKKRS+K  +KY
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKY 149


>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
           Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
           parva
          Length = 188

 Score =  239 bits (584), Expect = 5e-62
 Identities = 122/206 (59%), Positives = 151/206 (73%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGISRD  HKRR TGG+    +KKRKYELGRP++NT+LG + +  VR RGGN K+RALRL
Sbjct: 1   MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRL 60

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 265
           D+GNFSWGS+  TRKTR++DVVYNAS+NELVRTKTLVKNAIV VD TPF+ W+++HY L 
Sbjct: 61  DSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLE 120

Query: 264 LGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 85
           LG     K +E  +A      S+K A         A V   L +QF +GRLLAC++SRPG
Sbjct: 121 LG-----KSSEDPQA------SEKVA---------ALVPRTLLDQFSSGRLLACISSRPG 160

Query: 84  QCGRADGYILEGKELEFYLRKIKSKR 7
           QCGR DGY+LEG+EL FY R++  K+
Sbjct: 161 QCGRCDGYVLEGEELNFYRRRMDKKK 186


>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
           Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
           major
          Length = 220

 Score =  221 bits (540), Expect = 1e-56
 Identities = 116/219 (52%), Positives = 146/219 (66%), Gaps = 13/219 (5%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGI R   HKR+ TGGK    RK+ K ELGR  ANTRLG +R+  VR+RGGN K RALRL
Sbjct: 1   MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRL 60

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 265
           DTGNF+W SE    + R++DVVYNA++NELVRTKTLVKN IV VDA PF++WY  HY + 
Sbjct: 61  DTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGID 120

Query: 264 L-GRKKGAKLTEAEE--------AIINK----KRSQKTARKYLARQRLAKVEGALEEQFH 124
           L   KK  K   A E        A  +K    K S K  R++  R+R  +VE A+ +Q  
Sbjct: 121 LDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLR 180

Query: 123 TGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 7
            GR+LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 181 EGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219


>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
           n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
           hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 237

 Score =  189 bits (460), Expect = 6e-47
 Identities = 107/236 (45%), Positives = 146/236 (61%), Gaps = 30/236 (12%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGI+RD  HKRRATGGK+  ++KK+K  +GR  ANTRLG  R+H VR R G  K RALRL
Sbjct: 1   MGITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRL 60

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 265
           + GNFSW S+  T+ T+I++VVYNAS+N+ VRT TLVK AI+ +D  PFR W+   Y   
Sbjct: 61  ENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKD 120

Query: 264 LGRKKGAKLTEA-----EEAII------NKKRS---------------QKTARKYLARQ- 166
           +      K  E+     E+ ++      NK+++                KT +K  A++ 
Sbjct: 121 IASTDYYKSLESATFKTEKKVVVPKEEENKEKTIAQQIAETQVALMNPSKTMQKKYAKKL 180

Query: 165 ---RLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 7
              +  K + AL E F +GR+LAC++SRPGQ G  +GYILEGKEL+FY +KI  K+
Sbjct: 181 EVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236


>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
           Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
           mays (Maize)
          Length = 245

 Score =  150 bits (364), Expect = 2e-35
 Identities = 70/120 (58%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = -1

Query: 579 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 403
           G   P+++++ YELGR  ANT+L   + +  VR RGGNTK+RALR DT N+SWGSE  TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172

Query: 402 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 223
           KTRI+DVVY A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK   + + ++
Sbjct: 173 KTRILDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232


>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
           theta|Rep: 40S ribosomal protein S8 - Guillardia theta
           (Cryptomonas phi)
          Length = 178

 Score =  134 bits (325), Expect = 1e-30
 Identities = 85/205 (41%), Positives = 119/205 (58%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGI+R+  HKR++TGG ++  RKKR +  GR  +NT++G + +  +R RGG  K RAL L
Sbjct: 1   MGINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFL 60

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 265
             GNFS+ S   T K +I+ V +N S+NELVRT TL K +IV +D          + TL 
Sbjct: 61  SYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLDIAKTL----IYNTLI 116

Query: 264 LGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 85
                  K+  AE+ I NK                      L +Q  +G++LA + SRPG
Sbjct: 117 RNLNSNPKI--AEDTISNK---------------------ILIDQILSGKILARICSRPG 153

Query: 84  QCGRADGYILEGKELEFYLRKIKSK 10
           Q GRADGYILEG+EL+++L+KI+ K
Sbjct: 154 QSGRADGYILEGQELDYFLKKIQKK 178


>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC03085 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 120

 Score =  119 bits (286), Expect = 7e-26
 Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
 Frame = -1

Query: 333 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 175
           K+AIV +   PFRQW+E+ Y   LG      KKG  +T    EE  + KKRS+   +K+ 
Sbjct: 1   KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60

Query: 174 ARQRL--AKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 1
            RQ L  A VE +L+E+F TGRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 61  TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120


>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
           capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
           capsulatus NAm1
          Length = 141

 Score =  116 bits (278), Expect = 7e-25
 Identities = 54/81 (66%), Positives = 63/81 (77%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGISRD  HKR ATG KR+  RKKR +E GR  ANTR+GP+RIH VR+RGGN K+R LRL
Sbjct: 1   MGISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRL 60

Query: 444 DTGNFSWGSECSTRKTRIIDV 382
           ++GNFSWGSE   RK R+I V
Sbjct: 61  ESGNFSWGSEGIARKVRVIVV 81



 Score = 73.7 bits (173), Expect = 3e-12
 Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -1

Query: 258 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRPGQ 82
           R +    +   E I  K R     +K  AR     KVE ALE+QF  GRL A V+SRPGQ
Sbjct: 59  RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118

Query: 81  CGRADGYILEGKELEFYLRKIK 16
            GR DGYILEG+EL FY R I+
Sbjct: 119 SGRVDGYILEGEELAFYQRAIR 140


>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
           ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
           ATCC 50803
          Length = 174

 Score =  115 bits (276), Expect = 1e-24
 Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 9/119 (7%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRL---------GPQRIHSVRSRGG 472
           MGI+ D  +KR  TG  +    KKRKY LGR  ANT+L           Q+I ++R RGG
Sbjct: 1   MGITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGG 60

Query: 471 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 295
           N K RALRL  G+F+WGS   + K RI+ VVYN+++NELVRT TLVK  +V +D+ PF+
Sbjct: 61  NIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119



 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 23/42 (54%), Positives = 29/42 (69%)
 Frame = -1

Query: 135 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 10
           +Q     +LA ++SRPGQ G ADGYILEG EL FY +K+  K
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174


>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
           cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
           cuniculi
          Length = 173

 Score =  104 bits (250), Expect = 2e-21
 Identities = 50/110 (45%), Positives = 72/110 (65%)
 Frame = -1

Query: 624 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 445
           MGI+    HKRR TG K    RKKR    G   ++T++G +++  VR RGGN KY+ALRL
Sbjct: 1   MGINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRL 60

Query: 444 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 295
           D G+F + +    R  +++ VVY+ S+NELVRT TL K+++V + A PF+
Sbjct: 61  DMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVKISAEPFK 110



 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = -1

Query: 153 VEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 10
           V+ +L E F  G L A + SRPGQ G A G++L+G EL+FY  K   K
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167


>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
           genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
           undetermined SCAF13783, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 149

 Score = 95.5 bits (227), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 55/86 (63%)
 Frame = -1

Query: 258 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 79
           R+  +  T  EE ++NKKRS+KT +KY  R                    AC+ASRPGQC
Sbjct: 64  RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123

Query: 78  GRADGYILEGKELEFYLRKIKSKRAK 1
           GRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 124 GRADGYILEGKELEFYLRKIKAKKGK 149


>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
           natans|Rep: Ribosomal protein S8 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 176

 Score = 77.0 bits (181), Expect = 4e-13
 Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = -1

Query: 597 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWG 421
           K++ TGGK+  I KK+ +  G    NT L     I   R RGGN K++A+ L  G+F W 
Sbjct: 3   KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWK 62

Query: 420 SECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPF 298
           +   ++ ++I+ V+YN +N +LV+ + L K  I+ +D+ PF
Sbjct: 63  TMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDSMPF 103


>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
           Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
           torridus
          Length = 125

 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 33/92 (35%), Positives = 52/92 (56%)
 Frame = -1

Query: 594 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 415
           R+ +GGK  P   KR+YELGR    TRLG + +  +RS GGN+K+  LR D  N     +
Sbjct: 10  RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69

Query: 414 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
            +TRK +I  V  N+++   V+   + +  ++
Sbjct: 70  KTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101


>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
           Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
           marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
          Length = 125

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 36/92 (39%), Positives = 54/92 (58%)
 Frame = -1

Query: 594 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 415
           R+ +GG+    + K++ E+GR  A T +G +R   VR+ GGN K RALRL+    S  + 
Sbjct: 9   RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68

Query: 414 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
             T+KT+I  V  N+++   VR K L K AI+
Sbjct: 69  GETKKTKIEAVEANSADPNYVRRKLLTKGAII 100


>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
           Euryarchaeota|Rep: 30S ribosomal protein S8e -
           Thermoplasma acidophilum
          Length = 127

 Score = 62.5 bits (145), Expect = 9e-09
 Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
 Frame = -1

Query: 594 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGS 418
           ++ATGG     RKKR++ELGR    T+LG +    V R+ GGNTK      +T N    S
Sbjct: 10  KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69

Query: 417 ECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVD 310
           E   +K +II V  N +N+  V+   + K  ++  +
Sbjct: 70  EKKIKKAKIITVKANPANSHYVQRNIINKGTVIATE 105


>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr14 scaffold_54, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 110

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 39/92 (42%), Positives = 54/92 (58%)
 Frame = -1

Query: 360 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 181
           ELVRT+TLVKNAI+        Q Y  HY L +G KK A  T  ++    +++     RK
Sbjct: 31  ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78

Query: 180 YLARQRLAKVEGALEEQFHTGRLLACVASRPG 85
              RQ+  K++  +EEQF +GRLLA ++S PG
Sbjct: 79  LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110


>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
           Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
           horikoshii
          Length = 127

 Score = 57.2 bits (132), Expect = 3e-07
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = -1

Query: 594 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGS 418
           ++ +GG+    RKKRK ELGR  +NTR+  Q +   +R+ GGN K R       N  +  
Sbjct: 10  KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDK 68

Query: 417 ECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
               RK RII V+ N +N +  R   + K AI+
Sbjct: 69  SGKGRKVRIIRVLENPANRQFARRNIITKGAII 101


>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
           Euryarchaeota|Rep: 30S ribosomal protein S8e -
           Uncultured methanogenic archaeon RC-I
          Length = 125

 Score = 56.4 bits (130), Expect = 6e-07
 Identities = 31/95 (32%), Positives = 46/95 (48%)
 Frame = -1

Query: 594 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 415
           R+ATGG+    R KRK+ELGR      +G Q++  +   G  +K R L+ D  N +    
Sbjct: 9   RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68

Query: 414 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVD 310
             T+K ++  V  N +N   VR   L K   V  +
Sbjct: 69  GKTQKVKMTTVTENPANKNYVRRNFLTKGTFVTTE 103


>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
           Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
           solfataricus
          Length = 133

 Score = 56.0 bits (129), Expect = 7e-07
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
 Frame = -1

Query: 594 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGS 418
           R+ TGG +   R KRKYE+G P   T L  + I    R+ GGN K R     T N    +
Sbjct: 10  RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69

Query: 417 ECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 307
             + +K +I++++   +N EL R   +++ A +  +A
Sbjct: 70  TNTAKKVKILEILETPANKELARRGIIIRGAKIRTEA 106


>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
           Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
           Methanopyrus kandleri
          Length = 133

 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
 Frame = -1

Query: 603 WHKR---RATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT- 439
           WH R   + TGG+  P RKKRK+E+G P   T +G +R +   R  GGN K + L+  T 
Sbjct: 4   WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATH 62

Query: 438 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
            N +       +  RI +VV N ++    R   + K AI+
Sbjct: 63  ANVADPETGEVKCVRIEEVVKNPASQYYERHGVITKGAII 102


>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
           Desulfurococcales|Rep: 30S ribosomal protein S8e -
           Aeropyrum pernix
          Length = 136

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
 Frame = -1

Query: 624 MGISRDHWH-KRRATGGKRAPIRK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKY 460
           MGI +  W  K++ +GGKR    K KRKY  GRP   T L     +    VR+RGG+ K 
Sbjct: 1   MGIYQ--WRDKKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKI 58

Query: 459 RALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
           +A ++     S       RK RI+ +V   ++ E  R   +VK A++
Sbjct: 59  KAKKVAFAVVSNPKTGEARKARILRIVETPAHREYARRGIIVKGAVI 105


>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
           Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
           symbiosum
          Length = 129

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 27/91 (29%), Positives = 47/91 (51%)
 Frame = -1

Query: 591 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSEC 412
           + TGG+R P+R +RKYE+ R       G Q   + + RG  TK     +D  N +     
Sbjct: 12  KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGA 70

Query: 411 STRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
             +K++I+ V+ N +NN+  R   + + A++
Sbjct: 71  KVKKSKIVKVLENPTNNDYRRRGVITRGAVL 101


>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
           Methanococcus|Rep: 30S ribosomal protein S8e -
           Methanococcus maripaludis
          Length = 128

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = -1

Query: 597 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWG 421
           +R +TG K     KK K E+GRPAA T++  + +   VR RG N K +  + +  N    
Sbjct: 9   RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQ 68

Query: 420 SECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
           +    +K  + +V+ N +N   +R   + K AI+
Sbjct: 69  ANKVCKKVVVTNVIDNKANKHYIRRNVMTKGAII 102


>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
           Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
           protein S8e - Methanosphaera stadtmanae (strain DSM
           3091)
          Length = 126

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 28/92 (30%), Positives = 45/92 (48%)
 Frame = -1

Query: 594 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 415
           R+ +G +    + KR  E GR  A TR+G +    + +RG  TK RA      N     +
Sbjct: 10  RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKD 69

Query: 414 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
            S++   ++ V+ N +N+  VR   + K AIV
Sbjct: 70  NSSKNVEMLTVLENGANSHFVRRNIITKGAIV 101


>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
           Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
           aerophilum
          Length = 131

 Score = 46.0 bits (104), Expect = 8e-04
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
 Frame = -1

Query: 594 RRATGGKRAPIRKKRKYEL-GRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWG 421
           ++ +GGK+  +RK +K  L G P    +LG      V R RGGN K R       N    
Sbjct: 13  KKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIP 72

Query: 420 SECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
            E  + K +II ++   +N +  R   +VK +++
Sbjct: 73  KERKSVKAKIISIISTPANPDFARRNFIVKGSVI 106


>UniRef50_A1RX37 Cluster: Ribosomal protein S8e; n=1; Thermofilum
           pendens Hrk 5|Rep: Ribosomal protein S8e - Thermofilum
           pendens (strain Hrk 5)
          Length = 128

 Score = 38.7 bits (86), Expect = 0.12
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
 Frame = -1

Query: 594 RRATGG-KRAPIRKKRKYELGR-PAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWG 421
           R+ TGG K   ++ KRKY  GR P          +  V++RG   K +       N    
Sbjct: 10  RKITGGIKGRHVKTKRKYLSGRYPILTVPGQATEVKVVKARGNTYKLKVKVASEVNVYIP 69

Query: 420 SECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
            E  T + +II V+ N SN +  R   + K AI+
Sbjct: 70  KEGKTVRAQIIKVLDNPSNKDFARRGIISKGAIL 103


>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
           CG5899-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 844

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
 Frame = -1

Query: 420 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 256
           SE ST+ T    ++   +  AS  EL   KTL  K A+ ++D  PF  W +    L   R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233

Query: 255 KKGAKLTEAEEAIINKKRS 199
             G  L  A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251


>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
           repeat - Magnetospirillum magneticum (strain AMB-1 /
           ATCC 700264)
          Length = 556

 Score = 36.7 bits (81), Expect = 0.48
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -1

Query: 588 ATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 478
           A G +RAP   K  YE  R AA TRL P  + ++R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304


>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 738

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 21/57 (36%), Positives = 31/57 (54%)
 Frame = -1

Query: 258 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 88
           +K+G K     E I    +     RK   RQ+  K++  +EEQF +GRLLA ++S P
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 326


>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 161

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 237 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 127
           T  EE I+NKK S+K  +KY   ++ AK+   L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141


>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
           acetivorans|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 90

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 288 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 133
           Y + +TL   R + A   EA E ++ K   +K A  K LA+  L K+EG LEE
Sbjct: 31  YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83


>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
           protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
           domain-containing protein 6. - Bos Taurus
          Length = 770

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 19/37 (51%), Positives = 22/37 (59%)
 Frame = -2

Query: 611 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSALS 501
           G    S GP  G + PYA + S S G+PL TPGS LS
Sbjct: 595 GAVPSSSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629


>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
           japonicum|Rep: Blr7583 protein - Bradyrhizobium
           japonicum
          Length = 261

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 324 IVVVDATPFRQWYESHYTLPLGRKK 250
           ++ +D  PFR+W  +  TLPLG  K
Sbjct: 22  VIAIDGDPFREWQRTSRTLPLGEVK 46


>UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2;
           Methylobacterium extorquens PA1|Rep:
           Exodeoxyribonuclease III Xth - Methylobacterium
           extorquens PA1
          Length = 344

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -1

Query: 591 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL-DTGNFSWGSE 415
           R   G+R P+R++ + E  RP A+ R  P   H+ R+R G    R L + +   F + S 
Sbjct: 7   RGLAGRRGPLRRRGRRERLRPLADDR-RPALRHAARARPGGGGGRGLTVCEARRFRYRSG 65

Query: 414 CSTRKTRIIDV 382
            S   ++ I V
Sbjct: 66  SSRHASQAIPV 76


>UniRef50_A5V4W5 Cluster: TonB-dependent receptor precursor; n=1;
           Sphingomonas wittichii RW1|Rep: TonB-dependent receptor
           precursor - Sphingomonas wittichii RW1
          Length = 803

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
 Frame = -2

Query: 611 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSALSESTPFVHVVEILSTVR-CVWTPV 435
           GI    +    GN   Y        G P    GS L    P +  +   STV+   WTP+
Sbjct: 488 GIRWTEDKKTFGNANQYVVEAGFLTGAPFNPDGSGLQNGDPLMGPLGQRSTVKDTAWTPM 547

Query: 434 TSLGDR 417
            SL  R
Sbjct: 548 ASLSYR 553


>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 620

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 309 ATPFRQWYESHYTLPLGRKKGAKLTEAE 226
           ATPF Q + +HY   L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,744,081
Number of Sequences: 1657284
Number of extensions: 13162469
Number of successful extensions: 38765
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 37345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38735
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -