Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c15f
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    33   0.002
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    33   0.002
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              23   2.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   3.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   5.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.8  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   9.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.0  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 168 FRAKCQYLVRIMNFEDYETLPTQNFVTHMTAGAIAGVMEHCIMYPLDSVKTRM 326
           F  K +Y    +   D  T   + FV ++ +G  AG    C +YPLD  +TR+
Sbjct: 91  FAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 168 FRAKCQYLVRIMNFEDYETLPTQNFVTHMTAGAIAGVMEHCIMYPLDSVKTRM 326
           F  K +Y    +   D  T   + FV ++ +G  AG    C +YPLD  +TR+
Sbjct: 91  FAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +1

Query: 349 IAP*AKHFGIWCSGKAY*GLSAECRQWCS 435
           IAP  K + +W  G     LS   + W S
Sbjct: 105 IAPPEKKYSVWIGGSILASLSTFQQMWIS 133


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 360  LWCYCGPSAKTAFES*RSPAGTLCN 286
            +WCY G  A+ A+    +   T+C+
Sbjct: 953  VWCYYGGDARPAYRRRLNVNETVCS 977


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 126 FTALSVPFSLSIFVTRHP 73
           F  L +PF LS+F  ++P
Sbjct: 82  FLILGLPFELSVFWQQYP 99


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 394 PSRCTIYRNVSLMVLLWAVRKDCIRVLTESSG 299
           P+   IY N     L+W   +D +R+++   G
Sbjct: 204 PTGRGIYHNDDKTFLVWCNEEDHLRIISMQMG 235


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 307 TPLRLECSLCGRPTIAP*AKH 369
           T L  +  + G+PTI+P ++H
Sbjct: 734 TVLAYKPKILGKPTISPDSRH 754


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 60  IKFFFHKQNFTCTRD 16
           +K FFHK   TC  D
Sbjct: 106 LKTFFHKIALTCEDD 120


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -3

Query: 296 HYAMLHNTRYRPGSHVRDEVLGR 228
           H+ M  N+R  PG++   +   R
Sbjct: 229 HFGMTDNSRLEPGTNKNGKFFSR 251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,191
Number of Sequences: 438
Number of extensions: 3818
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)