Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c14r
         (760 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g26570.2 68417.m03831 calcineurin B-like protein 3 (CBL3) ide...    29   2.5  
At4g26570.1 68417.m03830 calcineurin B-like protein 3 (CBL3) ide...    29   4.4  
At5g55990.1 68418.m06986 calcineurin B-like protein 2 (CBL2) ide...    28   7.7  

>At4g26570.2 68417.m03831 calcineurin B-like protein 3 (CBL3)
           identical to calcineurin B-like protein 3 (GI:22136404)
           [Arabidopsis thaliana]
          Length = 230

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
 Frame = -2

Query: 408 FNLFKFPGNLAIPRGLESGLNFKLAIIITPSENSSVMDHAPEVNYYKQVSYEYDTKP--- 238
           + LFK   +  I  GL +   F+LA+  T  + S   D      Y  QV   +DTK    
Sbjct: 51  YELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADR-----YQSQVFDLFDTKHNGI 105

Query: 237 LGFP--------FHRNSGFQNSLASNYRLFDIK 163
           LGF         FH N+  ++ +  +++L+D+K
Sbjct: 106 LGFEEFARALSVFHPNAPIEDKIDFSFQLYDLK 138


>At4g26570.1 68417.m03830 calcineurin B-like protein 3 (CBL3)
           identical to calcineurin B-like protein 3 (GI:22136404)
           [Arabidopsis thaliana]
          Length = 226

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
 Frame = -2

Query: 408 FNLFKFPGNLAIPRGLESGLNFKLAIIITPSENSSVMDHAPEVNYYKQ---VSYEYDTKP 238
           + LFK   +  I  GL +   F+LA+  T  + S   D   ++   K    + +E   + 
Sbjct: 51  YELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARA 110

Query: 237 LGFPFHRNSGFQNSLASNYRLFDIK 163
           L   FH N+  ++ +  +++L+D+K
Sbjct: 111 LSV-FHPNAPIEDKIDFSFQLYDLK 134


>At5g55990.1 68418.m06986 calcineurin B-like protein 2 (CBL2)
           identical to calcineurin B-like protein 2 GI:3309084
           from [Arabidopsis thaliana]
          Length = 226

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = -2

Query: 408 FNLFKFPGNLAIPRGLESGLNFKLAIIITPSENSSVMDHAPEVNYYKQ---VSYEYDTKP 238
           + LFK   +  I  GL +   F+LA+  T  + S   D   ++   K    + +E   + 
Sbjct: 51  YELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARA 110

Query: 237 LGFPFHRNSGFQNSLASNYRLFDIK 163
           L   FH N+   + +  +++L+D+K
Sbjct: 111 LSV-FHPNAPIDDKIHFSFQLYDLK 134


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,939,490
Number of Sequences: 28952
Number of extensions: 269803
Number of successful extensions: 691
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)