Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c14f
         (642 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0622 + 4649195-4649713,4650222-4650400,4650500-4650800           28   5.5  
01_06_1261 - 35826513-35828941,35829201-35829294                       28   7.2  
12_02_0665 + 21670956-21671834,21672563-21672583                       27   9.6  
02_05_1039 + 33707196-33708815                                         27   9.6  
02_02_0648 - 12619468-12619874,12621432-12621512,12621607-126217...    27   9.6  

>01_01_0622 + 4649195-4649713,4650222-4650400,4650500-4650800
          Length = 332

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 322 KCIERGFIVMDGITLNMNNDDHVSIMAK 405
           K + +G IV+DG+ L+ N  DH+    K
Sbjct: 187 KRLSKGLIVLDGVLLSTNLSDHLRAAVK 214


>01_06_1261 - 35826513-35828941,35829201-35829294
          Length = 840

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +1

Query: 82  DLLNLRHAEHFFNTHQQLVARYNLEKQHLLHMNH----SYPNETEYDPSLIYDNGLRFP 246
           DL+N  H E  + ++Q L  RY+     L   NH    ++P + +   SL  DNG  FP
Sbjct: 64  DLIN--HVEETYRSYQALADRYDRVSGELHKSNHTIATAFPEQVQL--SLQDDNGDGFP 118


>12_02_0665 + 21670956-21671834,21672563-21672583
          Length = 299

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
 Frame = +1

Query: 286 RAEAEGVWINIRK-------CIERGFIVMDGITLNMNNDD 384
           RAE + +W+ +R         + +GF+ +DG +L + N D
Sbjct: 201 RAEGDSLWVTVRAPPEILRLLVSKGFVAVDGASLTVVNVD 240


>02_05_1039 + 33707196-33708815
          Length = 539

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +1

Query: 193 NETEYDPSLIYDNGLRFPIRY-INYE-LDWTDERAEAEGVWINIRKCIERGF 342
           +E  YD S++ +N L  P    I+++  DWT +R +A+ ++  + +   RGF
Sbjct: 225 HELPYDHSILLEN-LMDPAHVPISHDRTDWTAKREDAQPLFFEVTERTPRGF 275


>02_02_0648 -
           12619468-12619874,12621432-12621512,12621607-12621716,
           12621896-12622164,12622440-12622567,12622637-12622699,
           12623196-12623493
          Length = 451

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 169 LHMNHSYPNETEYDPSLIYDNGLRFPIRYINYELD 273
           LH  HS   +   DP +I +   R  +RY N EL+
Sbjct: 45  LHTAHSEQEDPAVDPKVIQEKHTRERMRYRNMELN 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,338,797
Number of Sequences: 37544
Number of extensions: 350398
Number of successful extensions: 661
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)