Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c14f
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003145-7|AAB57714.2|  352|Caenorhabditis elegans Serpentine re...    31   0.53 
Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like ...    29   2.1  
Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81527-2|CAB04270.1|  361|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z68119-2|CAA92192.1|  457|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U16708-1|AAC46497.1|  457|Caenorhabditis elegans odr-7 protein.        28   4.9  

>AF003145-7|AAB57714.2|  352|Caenorhabditis elegans Serpentine
           receptor, class z protein4 protein.
          Length = 352

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 324 LTYVYPHTLRFSSFVCPIQFIIYIS 250
           L Y YP T  F S +C +QF IY++
Sbjct: 52  LAYFYPITKHFYSVICSMQFYIYVT 76


>Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical
           protein C07A9.3c protein.
          Length = 893

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/71 (19%), Positives = 29/71 (40%)
 Frame = +1

Query: 7   EDISLNCYYMGVHLLHPFWMSNDELDLLNLRHAEHFFNTHQQLVARYNLEKQHLLHMNHS 186
           + I +  Y  GVH +HP  M   +    + +     ++ HQQ + + +  +Q   +    
Sbjct: 67  DSIEMRDYNSGVHHMHPHQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQYQQQQ 126

Query: 187 YPNETEYDPSL 219
             +   Y P +
Sbjct: 127 AQHHQMYAPQI 137


>Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical
           protein C07A9.3b protein.
          Length = 965

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/71 (19%), Positives = 29/71 (40%)
 Frame = +1

Query: 7   EDISLNCYYMGVHLLHPFWMSNDELDLLNLRHAEHFFNTHQQLVARYNLEKQHLLHMNHS 186
           + I +  Y  GVH +HP  M   +    + +     ++ HQQ + + +  +Q   +    
Sbjct: 134 DSIEMRDYNSGVHHMHPHQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQYQQQQ 193

Query: 187 YPNETEYDPSL 219
             +   Y P +
Sbjct: 194 AQHHQMYAPQI 204


>Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical
           protein C07A9.3a protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/71 (19%), Positives = 29/71 (40%)
 Frame = +1

Query: 7   EDISLNCYYMGVHLLHPFWMSNDELDLLNLRHAEHFFNTHQQLVARYNLEKQHLLHMNHS 186
           + I +  Y  GVH +HP  M   +    + +     ++ HQQ + + +  +Q   +    
Sbjct: 134 DSIEMRDYNSGVHHMHPHQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQYQQQQ 193

Query: 187 YPNETEYDPSL 219
             +   Y P +
Sbjct: 194 AQHHQMYAPQI 204


>AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like
           kinase protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/71 (19%), Positives = 29/71 (40%)
 Frame = +1

Query: 7   EDISLNCYYMGVHLLHPFWMSNDELDLLNLRHAEHFFNTHQQLVARYNLEKQHLLHMNHS 186
           + I +  Y  GVH +HP  M   +    + +     ++ HQQ + + +  +Q   +    
Sbjct: 134 DSIEMRDYNSGVHHMHPHQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQYQQQQ 193

Query: 187 YPNETEYDPSL 219
             +   Y P +
Sbjct: 194 AQHHQMYAPQI 204


>Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical
           protein C54D10.4 protein.
          Length = 408

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +1

Query: 112 FFNTHQQLVARYNLEKQHLLHMNHSYPNETEYDPSLIYDNG 234
           FF++H+ L+ + ++EK  +   NH+Y      + ++  D G
Sbjct: 208 FFHSHEGLIVQPSIEKGFVTLKNHAYKYHKNLNETIANDTG 248


>Z81527-2|CAB04270.1|  361|Caenorhabditis elegans Hypothetical
           protein F35E12.2 protein.
          Length = 361

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 475 NRHPIDEYNPAPSVFYHPETSLRDPTFWKMIEYYLNVMKYFRHFMDP 615
           N+H ID+++ APS   H  T       + + E ++N+ K ++H + P
Sbjct: 99  NQH-IDQWSSAPSAILHINTISNTSQMFAIYE-FVNIAKKYQHVLIP 143


>Z68119-2|CAA92192.1|  457|Caenorhabditis elegans Hypothetical
           protein T18D3.2 protein.
          Length = 457

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +1

Query: 55  PFWMSNDELDLLNLRHAEHFFNTHQQLVARYNLEKQHLLHMNHSYPNETEYDPSLIYDNG 234
           P   S   +D  NL HA H F+T+       ++E      + HS  N  +  P L     
Sbjct: 151 PLHNSMTTMDGFNLTHAPHPFSTNTNSTKPKDIENTVQSTIKHSSENIQDKPPVL----S 206

Query: 235 LRFPIRY 255
           + +P++Y
Sbjct: 207 VEYPVKY 213


>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
           protein F40F12.5 protein.
          Length = 1144

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 247 IRYINYELDWTDERAEAEGVWINI 318
           +R +  ++ W  ER EA G+W N+
Sbjct: 253 MRRVPAKVSWIGERPEASGIWYNV 276


>U16708-1|AAC46497.1|  457|Caenorhabditis elegans odr-7 protein.
          Length = 457

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +1

Query: 55  PFWMSNDELDLLNLRHAEHFFNTHQQLVARYNLEKQHLLHMNHSYPNETEYDPSLIYDNG 234
           P   S   +D  NL HA H F+T+       ++E      + HS  N  +  P L     
Sbjct: 151 PLHNSMTTMDGFNLTHAPHPFSTNTNSTKPKDIENTVQSTIKHSSENIQDKPPVL----S 206

Query: 235 LRFPIRY 255
           + +P++Y
Sbjct: 207 VEYPVKY 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,469,068
Number of Sequences: 27780
Number of extensions: 336898
Number of successful extensions: 885
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)