Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c13r
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.8  

>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 282 KWIFHAGGAPREDGQLPDGEGQPGGTAAPFHVPGPQAR 169
           K+I H GG P       DG      T+A FH   PQ+R
Sbjct: 181 KYIQHFGGTPDSITLFGDG------TSANFHYLSPQSR 212


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 505 MWAKRILASSAAFRASFGLTKHCGTD 582
           +W K+   S AA        KHCG +
Sbjct: 381 VWCKQSFPSLAAMTTHMKEAKHCGVN 406


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 404 LKSGDNVRQQLSRIMDRF 351
           LK+GD ++  +S I D F
Sbjct: 299 LKTGDEIQDLISTIKDNF 316


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 404 LKSGDNVRQQLSRIMDRF 351
           LK+GD ++  +S I D F
Sbjct: 299 LKTGDEIQDLISTIKDNF 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,182
Number of Sequences: 336
Number of extensions: 3740
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)