Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c13r
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 399 e-112
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 368 e-102
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 208 4e-54
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 208 4e-54
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 182 2e-46
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 182 2e-46
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 182 3e-46
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 168 3e-42
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 168 3e-42
AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical ... 118 4e-27
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 73 3e-13
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 41 8e-04
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 30 1.9
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 29 3.4
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 4.4
Z93379-1|CAB07589.1| 218|Caenorhabditis elegans Hypothetical pr... 28 5.9
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 28 5.9
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 28 5.9
AC119287-2|AAM19064.2| 218|Caenorhabditis elegans Glutathione s... 28 5.9
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical protein
F56D2.6a protein.
Length = 739
Score = 399 bits (983), Expect = e-112
Identities = 176/225 (78%), Positives = 203/225 (90%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAR 543
A++DDG LT+LG++MAEFPLDPQLAKMLI S NCSNEILSITAMLSVPQC+VRPNE R
Sbjct: 492 AINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMR 551
Query: 542 KAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRI 363
ADEAK RFAHIDGDHLTLLNVYH+FKQN EDP WCYDNFINYR++K+ D VR QLSR+
Sbjct: 552 TEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRV 611
Query: 362 MDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTCL 183
MD++NL+R ST+F S+DYY+NIRKALV GFFMQVAHLER+G Y+TVKDNQ+V LHPST L
Sbjct: 612 MDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL 671
Query: 182 DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELGNFP 48
DHKP+W +YNEFVLTTKN+IRTVTD++PEWLL+IAPQYY+L NFP
Sbjct: 672 DHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFP 716
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical protein
F56D2.6b protein.
Length = 700
Score = 368 bits (905), Expect = e-102
Identities = 163/209 (77%), Positives = 188/209 (89%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAR 543
A++DDG LT+LG++MAEFPLDPQLAKMLI S NCSNEILSITAMLSVPQC+VRPNE R
Sbjct: 492 AINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMR 551
Query: 542 KAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRI 363
ADEAK RFAHIDGDHLTLLNVYH+FKQN EDP WCYDNFINYR++K+ D VR QLSR+
Sbjct: 552 TEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRV 611
Query: 362 MDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTCL 183
MD++NL+R ST+F S+DYY+NIRKALV GFFMQVAHLER+G Y+TVKDNQ+V LHPST L
Sbjct: 612 MDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL 671
Query: 182 DHKPDWVIYNEFVLTTKNYIRTVTDIKPE 96
DHKP+W +YNEFVLTTKN+IRTVTD++PE
Sbjct: 672 DHKPEWALYNEFVLTTKNFIRTVTDVRPE 700
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 208 bits (507), Expect = 4e-54
Identities = 101/224 (45%), Positives = 145/224 (64%), Gaps = 1/224 (0%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAR 543
ALD DG LT LG MAEFPL+P L+K+LI S + CS E+L+I AML+V F RP E +
Sbjct: 941 ALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQ 1000
Query: 542 KAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRI 363
AD+ K +F +GDHLTLL VY+++K + WC++NFI RS+K ++R+QL I
Sbjct: 1001 DHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGI 1060
Query: 362 MDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPST-C 186
MDR L S +D ++KA+ +GFF A + Y T+ D Q V +HPS+ C
Sbjct: 1061 MDRHKLLMVS---CGRD-VSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSAC 1116
Query: 185 LDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELGN 54
+P+WV+Y+E V+TTK Y+R VT I P+WL++ AP ++++G+
Sbjct: 1117 FQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 208 bits (507), Expect = 4e-54
Identities = 101/224 (45%), Positives = 145/224 (64%), Gaps = 1/224 (0%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAR 543
ALD DG LT LG MAEFPL+P L+K+LI S + CS E+L+I AML+V F RP E +
Sbjct: 941 ALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQ 1000
Query: 542 KAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRI 363
AD+ K +F +GDHLTLL VY+++K + WC++NFI RS+K ++R+QL I
Sbjct: 1001 DHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGI 1060
Query: 362 MDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPST-C 186
MDR L S +D ++KA+ +GFF A + Y T+ D Q V +HPS+ C
Sbjct: 1061 MDRHKLLMVS---CGRD-VSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSAC 1116
Query: 185 LDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELGN 54
+P+WV+Y+E V+TTK Y+R VT I P+WL++ AP ++++G+
Sbjct: 1117 FQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical protein
C04H5.6 protein.
Length = 1008
Score = 182 bits (443), Expect = 2e-46
Identities = 91/222 (40%), Positives = 137/222 (61%), Gaps = 2/222 (0%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQC-FVRPNEA 546
AL+ G LT LG MAEFP DP ++KM+IAS + CS EI++I AMLS F RP
Sbjct: 767 ALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQ 826
Query: 545 RKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSR 366
AD A+ F GDH+TL+NVY+ ++++ WC +N++ +R++K +VR QL
Sbjct: 827 VIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVG 886
Query: 365 IMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTC 186
+++R ++ S+ T I IRKA+ G+F V+ L+ TG Y TVK HP++C
Sbjct: 887 LLERVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSC 941
Query: 185 L-DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYE 63
L + P WV+Y E V T+K ++R +++I+ WLL++AP YY+
Sbjct: 942 LFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK 983
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 182 bits (443), Expect = 2e-46
Identities = 91/222 (40%), Positives = 137/222 (61%), Gaps = 2/222 (0%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQC-FVRPNEA 546
AL+ G LT LG MAEFP DP ++KM+IAS + CS EI++I AMLS F RP
Sbjct: 767 ALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQ 826
Query: 545 RKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSR 366
AD A+ F GDH+TL+NVY+ ++++ WC +N++ +R++K +VR QL
Sbjct: 827 VIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVG 886
Query: 365 IMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTC 186
+++R ++ S+ T I IRKA+ G+F V+ L+ TG Y TVK HP++C
Sbjct: 887 LLERVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSC 941
Query: 185 L-DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYE 63
L + P WV+Y E V T+K ++R +++I+ WLL++AP YY+
Sbjct: 942 LFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK 983
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 182 bits (443), Expect = 2e-46
Identities = 91/222 (40%), Positives = 137/222 (61%), Gaps = 2/222 (0%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQC-FVRPNEA 546
AL+ G LT LG MAEFP DP ++KM+IAS + CS EI++I AMLS F RP
Sbjct: 767 ALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQ 826
Query: 545 RKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSR 366
AD A+ F GDH+TL+NVY+ ++++ WC +N++ +R++K +VR QL
Sbjct: 827 VIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVG 886
Query: 365 IMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTC 186
+++R ++ S+ T I IRKA+ G+F V+ L+ TG Y TVK HP++C
Sbjct: 887 LLERVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSC 941
Query: 185 L-DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYE 63
L + P WV+Y E V T+K ++R +++I+ WLL++AP YY+
Sbjct: 942 LFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK 983
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 182 bits (442), Expect = 3e-46
Identities = 93/226 (41%), Positives = 134/226 (59%), Gaps = 4/226 (1%)
Frame = -3
Query: 722 ALDDDGNLTD-LGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEA 546
A+D+ LT LG MAEFPL P +K L+ S CS E+++I AM+ + F+ P
Sbjct: 487 AIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQ 546
Query: 545 RKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSR 366
R AD + +FA +GDH+T+LNV+ F +N WC D+F+NYR L DNVR QL R
Sbjct: 547 RHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVR 606
Query: 365 IMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTC 186
++ RF +++ S+ + NIR+ LV GFF Q A TG Y+TVK++ ++ +
Sbjct: 607 LLKRFEIEKVSSRGLI-NCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSS 665
Query: 185 LDHK---PDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELG 57
+ K P WVI+ E + ++ IR VT I+PEWL ++AP YYE G
Sbjct: 666 IMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYEFG 708
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 168 bits (409), Expect = 3e-42
Identities = 86/224 (38%), Positives = 127/224 (56%), Gaps = 3/224 (1%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAR 543
ALD+ G LT +G M EFPLDP L+KMLI S CS+E+L+I +MLSVP F RP
Sbjct: 842 ALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGRE 901
Query: 542 KAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRI 363
+ AD K +F + DHLT LNVY ++ + WC DN+++ ++LK VR QL I
Sbjct: 902 EEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEI 961
Query: 362 MDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTCL 183
M L S ++ I +RK + + +F A L+ G Y+ V+ LHP++ L
Sbjct: 962 MQDLKLPLIS---NGSEWDI-VRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSAL 1017
Query: 182 ---DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYEL 60
PD+V+Y+E ++T K Y++ VT + WL ++ P +Y +
Sbjct: 1018 FGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 168 bits (409), Expect = 3e-42
Identities = 86/224 (38%), Positives = 127/224 (56%), Gaps = 3/224 (1%)
Frame = -3
Query: 722 ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAR 543
ALD+ G LT +G M EFPLDP L+KMLI S CS+E+L+I +MLSVP F RP
Sbjct: 842 ALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGRE 901
Query: 542 KAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRI 363
+ AD K +F + DHLT LNVY ++ + WC DN+++ ++LK VR QL I
Sbjct: 902 EEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEI 961
Query: 362 MDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTCL 183
M L S ++ I +RK + + +F A L+ G Y+ V+ LHP++ L
Sbjct: 962 MQDLKLPLIS---NGSEWDI-VRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSAL 1017
Query: 182 ---DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYEL 60
PD+V+Y+E ++T K Y++ VT + WL ++ P +Y +
Sbjct: 1018 FGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061
>AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical
protein Y108F1.5 protein.
Length = 330
Score = 118 bits (284), Expect = 4e-27
Identities = 56/142 (39%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Frame = -3
Query: 722 ALDDDGNLTD-LGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEA 546
A+D+ LT LG MAEFPL P +K L+ S C E+++I AM+ + F+ P
Sbjct: 13 AIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCFTEMVTIVAMMQIQDVFITPYRQ 72
Query: 545 RKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSR 366
R AD + +FA +G+H+T+LNV+ F +N WC D+F+NYR L DNVR QL R
Sbjct: 73 RHQADVIRKKFAVEEGNHITMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVR 132
Query: 365 IMDRFNLKRTST--EFTSKDYY 306
++ RF +++ S+ +T D +
Sbjct: 133 LLKRFEIEKVSSRGHYTKVDIF 154
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 73.3 bits (172), Expect = 2e-13
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Frame = -3
Query: 713 DDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRP-NEARKA 537
+D LTDLG +MA PLDPQL++ML+ C I+++ A+L+ + +V +E R
Sbjct: 869 EDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDL 928
Query: 536 ADEAKMRFAHID-GDHLTLLNVYHAF--KQNMEDPHWCYDNFINYRSLKSGDNVRQQLSR 366
+ K A D DHL + + + F K N + +C D+F+N+ +++ R+QL R
Sbjct: 929 QSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLR 988
Query: 365 IMDRFNL 345
+ R L
Sbjct: 989 ELVRAKL 995
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical protein
T05E8.3 protein.
Length = 856
Score = 72.5 bits (170), Expect = 3e-13
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 31/235 (13%)
Frame = -3
Query: 701 LTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEARKAAD--E 528
LT++G +PL P A++L + C E + I A + F +++ AD
Sbjct: 585 LTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDR 644
Query: 527 AKMRFAHIDGDHLTLLNV--------------------YHAFKQNMEDPH------WCYD 426
+ RF +GDH+TLL + Y +++E + +C D
Sbjct: 645 IRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARYGKANKSLEREYNQTIRKFCND 704
Query: 425 NFINYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLER 246
N IN + LK+ + +QL +I +++ T T ++ +RKAL G F+ +R
Sbjct: 705 NMINEQHLKTASMIEEQLKQIA----IEQKVTFSTCGADFMKMRKALALGMFLNSCEYDR 760
Query: 245 TGSYLTVKDNQVV--QLHPSTCLDH-KPDWVIYNEFVLTTKNYIRTVTDIKPEWL 90
+ N + ++HPS+CL KP +++++E + T + VT I +W+
Sbjct: 761 QEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDWV 815
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
C06E1.10 protein.
Length = 1148
Score = 46.8 bits (106), Expect = 2e-05
Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 33/251 (13%)
Frame = -3
Query: 710 DGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFV--------RP 555
+ +T LG +A FPL P AK + + HN + + + ++LSV + + P
Sbjct: 744 EARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTP 803
Query: 554 NEARK----AADEAKMRFAHID----GDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLK 399
E ++ E + +H GD L++ +Q + C + ++L
Sbjct: 804 EETKELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALV 863
Query: 398 SGDNVRQQLSRIMDRFNLKRTSTEFTS-----KDYYIN-IRKALVNGFFMQVA-HLERT- 243
+RQQL+ I++ K + S D +R+ +V F ++A ++R+
Sbjct: 864 EARKLRQQLTNIVNASCKKEHAAALDSDLPPPTDQQAQLLRQMVVASFSDRLARRVDRSV 923
Query: 242 -------GSYLTVKDNQVVQLHP-STCLDHKPDWVIYNEFV-LTTKNYIRTVTDIKPEWL 90
G+Y T V + P S +P++VIY E V + K + +V + EWL
Sbjct: 924 GQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWL 983
Query: 89 LKIAPQYYELG 57
++A Y G
Sbjct: 984 SRLAESYCNYG 994
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 41.1 bits (92), Expect = 8e-04
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Frame = -3
Query: 701 LTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEARKAADEAK 522
LT LG ++++ P++ +AKML+ C + +L++ A LSV F + E +
Sbjct: 510 LTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVERR 569
Query: 521 MRFAHIDGDHLTLLNVYH--AFKQNMEDP--HWCYDNFINYRSLKSGDNVRQQLSRIMDR 354
GD TL++++ ++ E W +N I+ L +R Q +I++
Sbjct: 570 ASLTSPLGDPFTLISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKLRAQYRQILED 629
Query: 353 FNL-KRTSTEFTSKD 312
L ++ S T +D
Sbjct: 630 AGLVEKASAAETGED 644
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 261 GAPREDGQLPDGEGQPGGTAAPFHVPGPQARLG 163
G P DGQ P G G PG A VPG Q G
Sbjct: 211 GGPGNDGQ-PGGPGNPGAPGAVTEVPGQQGPPG 242
>Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical
protein H13N06.3a protein.
Length = 468
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Frame = -3
Query: 698 TDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVP---QCFVRPNEARKAADE 528
TDL +A+FP P A C NC E A S+ +C + EARK+
Sbjct: 8 TDLSLKLAKFP--PGRAGSR-PDCPMNCEKESQMTIASQSIEDFKECLYQMQEARKSVTN 64
Query: 527 AKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF--INYRSLKSGDNVRQQL 372
+ HI D + ++ + + M D ++ I+ R G N++ ++
Sbjct: 65 EILETGHIKADQ---VQIFKSTLEEMNDERTSKNHIRDIHSRGTTFGINIQDEI 115
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -2
Query: 261 GAPREDGQLPDGEGQPGGTAAPFHVPGPQARLGH 160
GAP GQ+ D G P G A P PGP GH
Sbjct: 262 GAPGAPGQVVDVPGAP-GPAGPPGPPGPSGAPGH 294
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = -3
Query: 452 MEDPHWCYDNFINYRSLKS----GDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKAL 285
M+D + D + + L S G+ +R+Q+S+ +DR+++ + T++ ++
Sbjct: 270 MKDKNLPEDEILRVKDLYSYGDYGNKIREQVSKAVDRYSIDILGFDSTARTMFMRHMPRT 329
Query: 284 VNGFFMQVAHLERTGSYLTVKDNQVVQLHP 195
V M Y V DN +V L P
Sbjct: 330 VE--VMAKLDYHYLYGYTKVADNSMVNLAP 357
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 261 GAPREDGQLPDGEGQPGGTAAPFHVPGPQARLG 163
G P DGQ P GQPG +++ PGP + G
Sbjct: 203 GQPGRDGQ-PGQAGQPGSSSSEPGQPGPNGQPG 234
>Z93379-1|CAB07589.1| 218|Caenorhabditis elegans Hypothetical
protein F21H7.1 protein.
Length = 218
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 288 TCKWIFHAGGAPREDGQLPDGEGQPG 211
+ + +FH GG P ED +LP PG
Sbjct: 17 SARMLFHLGGVPYEDVRLPTINAVPG 42
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 267 AGGAPREDGQLPDGEGQPG-GTAAPFHVPGPQARLG 163
A GAP DGQ P GQ GT PGPQ +G
Sbjct: 183 APGAPGNDGQ-PGQNGQRSTGTPGAAGAPGPQGPVG 217
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Frame = -2
Query: 261 GAPREDGQLPDGEGQPG-----GTAAPFHVPGPQARLGHIQ 154
GAP G + D G PG G A P PG + GH Q
Sbjct: 225 GAPGAPGHVVDVPGTPGPAGPPGPAGPAGAPGQPGQAGHAQ 265
>AC119287-2|AAM19064.2| 218|Caenorhabditis elegans Glutathione
s-transferase protein35 protein.
Length = 218
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 282 KWIFHAGGAPREDGQLPDGEGQPG 211
+ +FH GG P ED ++P + PG
Sbjct: 19 RMLFHLGGVPFEDARMPTDDIVPG 42
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = -1
Query: 643 C**PAAITTVPTRSSPSLPCCQCRSAS*DQTRRGRLPTRLKCVLPTSTVTILRY*TYTTP 464
C PA +T P+ S LP A+ + P+R + + TST T T
Sbjct: 204 CEGPAQTSTAPSTRSSKLPTSSVWKATTTPSDLPTKPSRTRSLTSTSTTTA----KLPTT 259
Query: 463 SNRTWRIPTGAMITSLITDR*SRATTSD 380
++ T+ P + S T+ + AT +D
Sbjct: 260 TSTTFAAPQASTEPSEATEALATATPAD 287
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 671 FPLDPQLAKMLIASCNHNCSNEILS 597
FP+D Q K+ I SC CS +I S
Sbjct: 174 FPMDSQHCKLEIESCKSLCSPDIFS 198
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -3
Query: 707 GNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEARKAADE 528
G D+G M+E ++ + I N E++++T ++ N R DE
Sbjct: 2579 GKPLDVGT-MSEIAIEALKIRNEIPFSIQNLKTELITLTK-----PAWLETNVTRNEDDE 2632
Query: 527 AKMRFAHIDGDHLTLLNVYHAFKQNMEDP 441
A+IDG L LN QN+E P
Sbjct: 2633 GFNVSAYIDGQRLFSLNASSVEIQNIEVP 2661
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,566,135
Number of Sequences: 27780
Number of extensions: 360642
Number of successful extensions: 1159
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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