Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c13f
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 189 1e-48
05_04_0174 - 18728199-18731411 148 3e-36
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 142 2e-34
02_02_0572 + 11667455-11670783,11672026-11672419 139 2e-33
06_02_0263 - 13566621-13569875 134 6e-32
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 119 2e-27
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467... 116 1e-26
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 108 4e-24
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 103 9e-23
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 100 1e-21
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 99 3e-21
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 97 1e-20
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 92 4e-19
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 87 1e-17
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 65 8e-14
11_04_0454 - 17895935-17896093,17896878-17896911,17897114-178972... 51 7e-07
03_02_0587 + 9669283-9670497 38 0.005
01_06_0555 - 30182818-30183169,30183268-30183674,30183804-301847... 30 1.4
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883... 30 1.8
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 30 1.8
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 29 2.4
07_03_1670 - 28505732-28506426,28508202-28509309 29 4.2
08_02_0826 - 21583507-21583555,21584000-21584679 28 5.6
01_06_0366 - 28779899-28780543,28780813-28781076,28781165-287814... 28 5.6
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 28 5.6
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 28 7.4
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 28 7.4
03_02_0551 - 9411085-9411430,9411679-9411800 28 7.4
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 28 7.4
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 28 7.4
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 9.7
09_06_0103 + 20873310-20873382,20873530-20873735 27 9.7
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 189 bits (461), Expect = 1e-48
Identities = 89/137 (64%), Positives = 111/137 (81%)
Frame = +1
Query: 238 PGLNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQ 417
P +N++TG P+S RY E+L KR LPVW+ K+DF+ +L +Q ++LVGETGSGKTTQIPQ
Sbjct: 41 PSINRWTGRPYSARYLEILEKRRTLPVWQQKDDFLAVLRDNQTLILVGETGSGKTTQIPQ 100
Query: 418 WSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQT 597
+ +E GL VACTQPRRVAAMSV++RVAEEMDV +G+EVGYSIRFEDCS +T
Sbjct: 101 FVLE---AEGLSNRSMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKT 157
Query: 598 LLKYMTDGMLLREAMSD 648
+LKY+TDGMLLREAM+D
Sbjct: 158 VLKYLTDGMLLREAMAD 174
>05_04_0174 - 18728199-18731411
Length = 1070
Score = 148 bits (359), Expect = 3e-36
Identities = 72/117 (61%), Positives = 93/117 (79%)
Frame = +1
Query: 298 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACT 477
+R LPV++ K+D ++ ++ H+ +++VGETGSGKTTQIPQ+ E +G G+ K VACT
Sbjct: 400 ERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAG-GRKK-VACT 457
Query: 478 QPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
QPRRVAAMSVA RVAEEM V LG EVGYSIRFEDC+ +T++KYMTDGMLLRE + +
Sbjct: 458 QPRRVAAMSVAARVAEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGE 514
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 142 bits (345), Expect = 2e-34
Identities = 70/117 (59%), Positives = 92/117 (78%)
Frame = +1
Query: 298 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACT 477
+R LP+++++++ ++ + +Q IV+VGETGSGKTTQIPQ+ E A + GK VACT
Sbjct: 413 ERKTLPIYKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQYLHE-AGYTAKGK---VACT 468
Query: 478 QPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
QPRRVAAMSVA RV++EM V LG EVGYSIRFEDC+ +TL+KYMTDGMLLRE + +
Sbjct: 469 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTLIKYMTDGMLLREFLGE 525
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 139 bits (336), Expect = 2e-33
Identities = 66/117 (56%), Positives = 90/117 (76%)
Frame = +1
Query: 298 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACT 477
+R LP+++ K + ++ ++ +Q +V++GETGSGKTTQ+ Q+ E A + GK + CT
Sbjct: 583 QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE-AGYTTRGK---IGCT 638
Query: 478 QPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
QPRRVAAMSVA+RVAEE LG+EVGY+IRFEDC+GP T++KYMTDGMLLRE + D
Sbjct: 639 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVD 695
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 134 bits (324), Expect = 6e-32
Identities = 65/120 (54%), Positives = 89/120 (74%)
Frame = +1
Query: 289 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 468
+L +R LP++ KN+ + + +Q +V++GETGSGKTTQ+ Q+ E ++ GK +
Sbjct: 424 ILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITR-GK---I 479
Query: 469 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
ACTQPRRVAA SVA+RV+EE LG+EVGYSIRF+D +GP T++KYMTDGMLLRE + D
Sbjct: 480 ACTQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLD 539
>07_03_0539 -
19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 119 bits (287), Expect = 2e-27
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +1
Query: 343 RLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVA 522
+++ +Q +V+VGETGSGKTTQ+ Q+ E G V CTQPRRVAAMSVA+RV+
Sbjct: 631 KVVRENQVVVVVGETGSGKTTQLTQYLHE----DGYTTTGIVGCTQPRRVAAMSVAKRVS 686
Query: 523 EEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
EEM+ LG +VGY+IRFED + P T++KYMTDG+LLRE + D
Sbjct: 687 EEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKD 728
>06_01_0645 +
4670966-4671021,4671128-4671177,4671270-4671350,
4671862-4672078,4673220-4673607,4673830-4674033,
4675174-4675334,4675401-4675586,4675732-4675963,
4676530-4676732,4677074-4677208,4677367-4677550
Length = 698
Score = 116 bits (280), Expect = 1e-26
Identities = 62/128 (48%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = +1
Query: 268 HSQRYHELLRK-RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 444
H+ R +L+R+ R LP+ + + + + +++VGETGSGKTTQ+PQ+ + A
Sbjct: 16 HNARRRQLIRQQRKSLPIASVEKRLIEEVRKNDTLIVVGETGSGKTTQLPQFLYD-AGFC 74
Query: 445 GLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGM 624
GK G+ TQPRRVAA++VA+RVAEE + LG++VGYSIRF+D + T +KYMTDG+
Sbjct: 75 QDGKVIGI--TQPRRVAAVTVAKRVAEECNDQLGKKVGYSIRFDDSTSNATRIKYMTDGL 132
Query: 625 LLREAMSD 648
LLREA+ D
Sbjct: 133 LLREALLD 140
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 108 bits (259), Expect = 4e-24
Identities = 53/121 (43%), Positives = 75/121 (61%)
Frame = +1
Query: 286 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 465
++L R LP ++ K + + +Q IV+ GETG GKTTQ+PQ+ +E SG G
Sbjct: 255 KMLEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 314
Query: 466 VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMS 645
+ CTQPRR++AM+VA+RV+ E LG+ VGY +R E G T L + T G+LLR +S
Sbjct: 315 IICTQPRRISAMAVAERVSTERGENLGESVGYKVRLEGIKGKDTHLLFCTSGILLRRLLS 374
Query: 646 D 648
D
Sbjct: 375 D 375
>02_05_0672 +
30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 103 bits (248), Expect = 9e-23
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Frame = +1
Query: 277 RYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFA-AVSGLG 453
R HE+ + R LP+ + + M + + ++L GETG GKTTQ+PQ+ E S
Sbjct: 229 RPHEVEKTRRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFGTSNRS 288
Query: 454 KAKGV-ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 630
KG+ TQPRRVA ++ A+RV+ E+ + LG+EVG+ +R + G + +K+MTDG+LL
Sbjct: 289 DRKGIIGITQPRRVAVLATARRVSYELGLKLGKEVGFQVRHDKMVGSKCSIKFMTDGILL 348
Query: 631 REAMSD 648
RE SD
Sbjct: 349 REVQSD 354
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 100 bits (239), Expect = 1e-21
Identities = 46/116 (39%), Positives = 76/116 (65%)
Frame = +1
Query: 286 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 465
++++ R LP+ YK+ L HQ +++ GETG GKTTQ+PQ+ ++ + G G++
Sbjct: 271 KIVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDH--MWGKGESCK 328
Query: 466 VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLR 633
+ CTQPRR++A+SVA+R++ E ++G VGY IR E G + + + T+G+LLR
Sbjct: 329 IVCTQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLR 384
>04_03_0985 -
21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 98.7 bits (235), Expect = 3e-21
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 4/123 (3%)
Frame = +1
Query: 280 YHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 459
Y ++L R LP+ +K+ F++LL + IV+ GETG GKTTQ+PQ+ ++ S LG
Sbjct: 579 YLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESELGGY 638
Query: 460 KGVACTQPRRVAAMSVAQRV-AEEMDVALGQE---VGYSIRFEDCSGPQTLLKYMTDGML 627
+ CTQPRR+AA+SVA+RV +E + + G + VGY +R + +T L + T G+L
Sbjct: 639 CSIVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNERTKLLFCTTGIL 698
Query: 628 LRE 636
LR+
Sbjct: 699 LRK 701
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/113 (41%), Positives = 70/113 (61%)
Frame = +1
Query: 310 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 489
LP ++ + +F++ + +Q +V+ GETG GKTTQ+PQ+ +E + G + CTQPRR
Sbjct: 1141 LPAFKMREEFLKAVAANQVLVISGETGCGKTTQLPQFILEEEIDNLRGADCSIICTQPRR 1200
Query: 490 VAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
++A+SVA R+A E LG VGY IR E QT L + T G+LLR + +
Sbjct: 1201 ISAISVAARIASERGEELGDTVGYQIRLESKRSAQTRLLFCTTGVLLRRLVQE 1253
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/108 (42%), Positives = 72/108 (66%)
Frame = +1
Query: 310 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 489
LP+ E++++ M + + +V++GETGSGK+TQ+ Q G + +A TQPRR
Sbjct: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQ----ILHRRGYTRRGAIAVTQPRR 70
Query: 490 VAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLR 633
VAA+SV++RVA+E+ V LG EVGY+IRFED + +T + + G++ R
Sbjct: 71 VAAVSVSRRVAQELSVPLGDEVGYAIRFEDRTSEKTCINDILLGLMKR 118
>07_03_1304 -
25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 87.0 bits (206), Expect = 1e-17
Identities = 46/127 (36%), Positives = 71/127 (55%)
Frame = +1
Query: 268 HSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 447
H E R + GLP++ Y+ + + + +Q ++L+GETGSGK+TQ+ V++ A SG
Sbjct: 249 HMIMLRECRRLKEGLPIYAYRRNILDHIFANQVMILIGETGSGKSTQL----VQYLADSG 304
Query: 448 LGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGML 627
L + CTQPR++AA+S+A RV EE + G + F D + + Y TD L
Sbjct: 305 LAANGSIVCTQPRKIAAISLAHRVVEESNGCYGDNFVLNSTFLDHQDFSSKIIYTTDNCL 364
Query: 628 LREAMSD 648
L M+D
Sbjct: 365 LHHCMND 371
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 64.9 bits (151), Expect(2) = 8e-14
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +1
Query: 280 YHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 459
Y L R+R LPV++Y+ + L+ H ++VGETGSGK+TQIPQ+ E G
Sbjct: 41 YASLERQRQRLPVYKYRKAILYLVERHATTIVVGETGSGKSTQIPQYLKEAGWAEG---G 97
Query: 460 KGVACTQPRRVAAMSV 507
+ + CTQPRR+A +
Sbjct: 98 RLIGCTQPRRLAVQGM 113
Score = 29.5 bits (63), Expect(2) = 8e-14
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 595 TLLKYMTDGMLLREAMSD 648
T++K++TDG+L+RE M D
Sbjct: 114 TMIKFLTDGVLIREMMED 131
>11_04_0454 -
17895935-17896093,17896878-17896911,17897114-17897252,
17897487-17897561,17897666-17897945
Length = 228
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 292 LRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGK 399
L KR LPVW+ K+DF+ +L+ +Q ++LVGETGSGK
Sbjct: 56 LEKRRTLPVWQLKDDFLAVLHDNQALILVGETGSGK 91
>03_02_0587 + 9669283-9670497
Length = 404
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 340 MRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRV 519
+ L H+ +V+ GSGK++ +P+ E SG G V C QPR +AA +V
Sbjct: 25 LEYLEDHRVVVVSAAPGSGKSSVLPRCLAE----SGYGP---VLCAQPRHLAAFVAMAKV 77
Query: 520 AEEMD 534
EE D
Sbjct: 78 GEEWD 82
>01_06_0555 -
30182818-30183169,30183268-30183674,30183804-30184773,
30184829-30184902,30184941-30185084,30185186-30185365,
30185448-30185988,30186081-30186538,30187723-30187901,
30187998-30188052,30188217-30188468
Length = 1203
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 334 DFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 468
DF + Q + LVG +GSGK+T I + A G K GV
Sbjct: 384 DFNLQIPAGQTVALVGSSGSGKSTAIALVQRFYDATEGTVKVDGV 428
>08_02_1345 -
26286448-26286679,26287483-26288038,26288068-26288358,
26288953-26290516
Length = 880
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 315 CLGIQK*FHEITQHSSMYSARRRNRVREDYPDPPVVCRICCSK 443
CLG +K F T HSS+++ ++ V Y +P V C CS+
Sbjct: 224 CLGCEKPF--CTVHSSLHAESTKHLVGLVYHNPYVACCFLCSE 264
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 304 LGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAV-SGLGKAKG 465
+GL V+ Y F R++ T + L+G TGSG WS +F A S LG G
Sbjct: 782 VGLHVFRY---FERVMATESAVRLIGGTGSG------NWSKDFGAFDSSLGSLSG 827
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 277 RYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 411
RY + + R G + + F N Q IV++GE G+GKTT I
Sbjct: 354 RYPTMTKTRCGFKLSVTEGSF----NDSQIIVMLGENGTGKTTFI 394
>07_03_1670 - 28505732-28506426,28508202-28509309
Length = 600
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 295 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQ 417
R R G P W +D RL V+V + GSGK T + +
Sbjct: 243 RVRRGFPSWVSASDRRRLQQQVAADVVVAKDGSGKFTTVSE 283
>08_02_0826 - 21583507-21583555,21584000-21584679
Length = 242
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 465 SGLYSTKTSGCYVCCSEGSRRNGCGFGSGSW 557
SG YS SG Y GS G G GSGSW
Sbjct: 79 SGSYSGSGSGSYSGSGSGS---GSGSGSGSW 106
>01_06_0366 - 28779899-28780543,28780813-28781076,28781165-28781431,
28781546-28781774,28781868-28781985,28782229-28782486,
28782585-28782858,28782950-28783475,28784289-28784527,
28784626-28784847,28784912-28784914,28785124-28785299,
28786147-28786201,28786288-28786557
Length = 1181
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 331 NDFMRLLNTHQCIVLVGETGSGKTTQI 411
+DF + + + I LVGE+GSGK+T I
Sbjct: 957 SDFTLHIPSQKTIALVGESGSGKSTII 983
>01_05_0212 + 19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 358 HQCIVLVGETGSGKTTQI 411
H + LVGE+GSGK+T I
Sbjct: 1067 HNTVALVGESGSGKSTAI 1084
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 488 RLG*VQATPLALPRPLTAANSTDHWGIWVVFPDPVSPTSTIH 363
R G + P+A P+ + + D W +FP PV+P +H
Sbjct: 1510 RGGLINVGPVA-PQMSRSGSDADRWQQKGIFPSPVTPMQVMH 1550
>07_01_1146 +
10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 517 VAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGM 624
+AE ALG + + R+ D + Q +++Y TDG+
Sbjct: 684 IAEFAGQALGVVIAETQRYADMAAKQAVVEYTTDGL 719
>03_02_0551 - 9411085-9411430,9411679-9411800
Length = 155
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = -1
Query: 634 LLATYRLSCILEVFVALNSLQNECCNQLPDPKPHPFLRLPSEQQT*QPLVLVEYRPLL*P 455
LL YR +C +AL C + +P PH LR + PLV V R L
Sbjct: 50 LLNQYRSACS----IALPQAILRQCEDIAEPMPHAILRQREDIAEPTPLVSVNARTSLNQ 105
Query: 454 C 452
C
Sbjct: 106 C 106
>01_06_0371 + 28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 331 NDFMRLLNTHQCIVLVGETGSGKTTQI 411
+DF + + + + LVGE+GSGK+T I
Sbjct: 1050 SDFTLHIPSGKTVALVGESGSGKSTAI 1076
>01_02_0042 - 10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 313 PVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 411
P E D +++ + + LVGE+GSGK+T I
Sbjct: 1054 PDVEIFRDLCLTIHSGKTVALVGESGSGKSTAI 1086
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 343 RLLNTHQCIVLVGETGSGKTT 405
R + + ++LVGETG GKTT
Sbjct: 1222 RCYRSREPVLLVGETGGGKTT 1242
>09_06_0103 + 20873310-20873382,20873530-20873735
Length = 92
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 CSKWPRQG*RSGLYSTKTSGC-YVCCSEGSRRNGCGFGS 548
C +W R L+ +++ C C SEG+ R CGF S
Sbjct: 32 CEEWTSDMYRM-LFLCRSTRCNQYCVSEGATRGRCGFSS 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,069,031
Number of Sequences: 37544
Number of extensions: 347899
Number of successful extensions: 1068
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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