Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c13f
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 189 1e-48
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 189 1e-48
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 137 5e-33
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 137 5e-33
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 136 2e-32
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 136 2e-32
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 136 2e-32
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 134 7e-32
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 134 7e-32
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 111 5e-25
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 95 5e-20
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 92 4e-19
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 32 0.30
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 32 0.30
U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 30 1.6
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 30 1.6
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 29 2.8
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 5.0
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 5.0
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 5.0
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 28 5.0
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 28 5.0
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 28 5.0
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 28 6.6
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 28 6.6
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 27 8.7
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 189 bits (461), Expect = 1e-48
Identities = 94/138 (68%), Positives = 102/138 (73%), Gaps = 4/138 (2%)
Frame = +1
Query: 244 LNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWS 423
+N Y P S RY + KR LPVWEYK FM LL +QCI LVGETGSGKTTQIPQW+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 424 VEFAAVSGLGKAKG----VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGP 591
VEF G+ G VACTQPRRVAAMSVA RVAEEMDV LGQEVGYSIRFEDC
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE 173
Query: 592 QTLLKYMTDGMLLREAMS 645
+T+LKY TDGMLLREAM+
Sbjct: 174 RTVLKYCTDGMLLREAMN 191
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 189 bits (461), Expect = 1e-48
Identities = 94/138 (68%), Positives = 102/138 (73%), Gaps = 4/138 (2%)
Frame = +1
Query: 244 LNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWS 423
+N Y P S RY + KR LPVWEYK FM LL +QCI LVGETGSGKTTQIPQW+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 424 VEFAAVSGLGKAKG----VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGP 591
VEF G+ G VACTQPRRVAAMSVA RVAEEMDV LGQEVGYSIRFEDC
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE 173
Query: 592 QTLLKYMTDGMLLREAMS 645
+T+LKY TDGMLLREAM+
Sbjct: 174 RTVLKYCTDGMLLREAMN 191
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 137 bits (332), Expect = 5e-33
Identities = 65/120 (54%), Positives = 89/120 (74%)
Frame = +1
Query: 289 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 468
++ +R LP++ K + M + +Q +V+VGETGSGKTTQ+ Q+++E +GLG+ +
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 469 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
CTQPRRVAAMSVA+RVAEE LG +VGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLID 648
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 137 bits (332), Expect = 5e-33
Identities = 65/120 (54%), Positives = 89/120 (74%)
Frame = +1
Query: 289 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 468
++ +R LP++ K + M + +Q +V+VGETGSGKTTQ+ Q+++E +GLG+ +
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 469 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
CTQPRRVAAMSVA+RVAEE LG +VGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLID 648
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 136 bits (328), Expect = 2e-32
Identities = 64/116 (55%), Positives = 85/116 (73%)
Frame = +1
Query: 301 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 480
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 481 PRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
PRRVAAMSVA RVA+E+ LG +VGYSIRFEDC+ +T+LKYMTDGMLLRE +++
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNE 473
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 136 bits (328), Expect = 2e-32
Identities = 64/116 (55%), Positives = 85/116 (73%)
Frame = +1
Query: 301 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 480
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 481 PRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
PRRVAAMSVA RVA+E+ LG +VGYSIRFEDC+ +T+LKYMTDGMLLRE +++
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNE 473
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 136 bits (328), Expect = 2e-32
Identities = 64/116 (55%), Positives = 85/116 (73%)
Frame = +1
Query: 301 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 480
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 481 PRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
PRRVAAMSVA RVA+E+ LG +VGYSIRFEDC+ +T+LKYMTDGMLLRE +++
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNE 473
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 134 bits (323), Expect = 7e-32
Identities = 63/118 (53%), Positives = 88/118 (74%)
Frame = +1
Query: 295 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVAC 474
++R LPV+ + M ++ + +++VGETGSGKTTQ+ Q+ +E G G + + C
Sbjct: 436 QQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE----DGFGDSGLIGC 491
Query: 475 TQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
TQPRRVAAMSVA+RVA+EM V LGQ+VGY+IRFEDC+ +T++KYMTDG+LLRE + D
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGD 549
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 134 bits (323), Expect = 7e-32
Identities = 63/118 (53%), Positives = 88/118 (74%)
Frame = +1
Query: 295 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVAC 474
++R LPV+ + M ++ + +++VGETGSGKTTQ+ Q+ +E G G + + C
Sbjct: 436 QQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE----DGFGDSGLIGC 491
Query: 475 TQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 648
TQPRRVAAMSVA+RVA+EM V LGQ+VGY+IRFEDC+ +T++KYMTDG+LLRE + D
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGD 549
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 111 bits (266), Expect = 5e-25
Identities = 53/129 (41%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Frame = +1
Query: 268 HSQRYHEL--LRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAV 441
H+ Y L ++R+ LP+++ + + + ++ I++VGETG GK+TQ+PQ+ +E
Sbjct: 61 HNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLE---A 117
Query: 442 SGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 621
+ + TQPRRVA +++A RVAEE D LG +VGY++RF+D S T +K+MTDG
Sbjct: 118 GWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDG 177
Query: 622 MLLREAMSD 648
+LLRE ++D
Sbjct: 178 LLLREILAD 186
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 103 bits (246), Expect = 1e-22
Identities = 53/126 (42%), Positives = 82/126 (65%)
Frame = +1
Query: 265 PHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 444
PH + +E R LP+ + M L + + ++++GETGSGK+TQ+PQ V +
Sbjct: 147 PHFEANYEKF-SRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVR----A 201
Query: 445 GLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGM 624
G+ + +A TQPRRVAA+S+A RVA EM +G VGY +RFE+ + +T ++YMTDG+
Sbjct: 202 GIANSGSIAVTQPRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGI 261
Query: 625 LLREAM 642
+LR+A+
Sbjct: 262 VLRKAL 267
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 94.7 bits (225), Expect = 5e-20
Identities = 49/125 (39%), Positives = 78/125 (62%)
Frame = +1
Query: 274 QRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 453
Q+ +L + + LP+ E + + LL T+Q +++ G+TG GK+TQ+PQ+ ++ +G
Sbjct: 80 QKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQYLLK----AGF- 134
Query: 454 KAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLR 633
GVACTQPRR+A ++A+RVA E G EV + IRFE +T L ++T+G+LLR
Sbjct: 135 --TGVACTQPRRIACTALARRVAYETLNQYGSEVAFQIRFETTKSQKTKLLFLTEGLLLR 192
Query: 634 EAMSD 648
+ D
Sbjct: 193 QMEKD 197
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 91.9 bits (218), Expect = 4e-19
Identities = 49/128 (38%), Positives = 76/128 (59%)
Frame = +1
Query: 265 PHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 444
P S+ EL + R LP +Y + ++ +++ +++ G TG GKTTQ+PQ+ ++ A +
Sbjct: 166 PKSKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHEN 225
Query: 445 GLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGM 624
K V TQPRR+AA+S+A+RVA E +G+ VGY +R + T+L Y T G+
Sbjct: 226 N--KHVRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGV 283
Query: 625 LLREAMSD 648
LLR SD
Sbjct: 284 LLRMLTSD 291
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 89.0 bits (211), Expect = 3e-18
Identities = 51/125 (40%), Positives = 76/125 (60%)
Frame = +1
Query: 274 QRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 453
+R E+ + R LP++ + + +N + V+ GETGSGKTTQIPQ+ E A + G
Sbjct: 224 ERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYE-AGYASEG 282
Query: 454 KAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLR 633
+ G+ T+PRRVAA+++AQRV E+ A EV Y IR+E T + +MTDG+L++
Sbjct: 283 ELIGI--TEPRRVAAIAMAQRVGVEL--AKPDEVSYQIRYEGTRSETTNILFMTDGVLMK 338
Query: 634 EAMSD 648
E D
Sbjct: 339 EMEQD 343
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/117 (32%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = +1
Query: 286 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 465
++ +R LPV +Y+ + ++ + ++ ++ GETG GK+TQ+ Q+ +E + G +
Sbjct: 373 KITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFN 432
Query: 466 VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCS-GPQTLLKYMTDGMLLR 633
+QPRR++A+S+A+RVA E +G+ GY++RF+ + P + + T G+LLR
Sbjct: 433 AVVSQPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR 489
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 499 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 621
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 499 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 621
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 499 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 621
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical
protein C23F12.3 protein.
Length = 143
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 592 VALNSLQNECCNQLPDPKPHP-FLRLPSEQQT*QPLVL 482
+A N+ Q C NQLP P P P F+++ +QQ + L L
Sbjct: 24 MAENNRQTRCANQLPPPAPVPDFIKVWVKQQKEKELAL 61
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 325 YKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 456
Y+N M + N QC+++ GE+G+GKT + +SG G+
Sbjct: 91 YRN--MLIDNESQCVIISGESGAGKTVNAKFIMNYISRISGGGQ 132
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 325 YKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 456
Y+N M + N QC+++ GE+G+GKT + +SG G+
Sbjct: 29 YRN--MLIDNESQCVIISGESGAGKTVNAKFIMNYISRISGGGQ 70
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 340 MRLLNTHQCIVLVGETGSGKT 402
M + +QC+V+ GE+GSGKT
Sbjct: 248 MLRIKENQCVVISGESGSGKT 268
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 337 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 489
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 158 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 209
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 307 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 486
GLPV KN + N Q + LVG +GSGK+T I F + G + G+ R
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGI---DVR 615
Query: 487 RVAAMSVAQR--VAEEMDVALGQEVGYSIRF 573
S+ Q+ + + V + Y+IRF
Sbjct: 616 NYTMHSLRQQIGIVPQDTVLFNDTIMYNIRF 646
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 337 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 489
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 158 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 209
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 337 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 489
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 161 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 212
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 307 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 486
GLPV KN + N Q + LVG +GSGK+T I F + G + G+ R
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGI---DVR 615
Query: 487 RVAAMSVAQR--VAEEMDVALGQEVGYSIRF 573
S+ Q+ + + V + Y+IRF
Sbjct: 616 NYTMHSLRQQIGIVPQDTVLFNDTIMYNIRF 646
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 307 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 486
GLPV KN + N Q + LVG +GSGK+T I F + G + G+ R
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGI---DVR 615
Query: 487 RVAAMSVAQR--VAEEMDVALGQEVGYSIRF 573
S+ Q+ + + V + Y+IRF
Sbjct: 616 NYTMHSLRQQIGIVPQDTVLFNDTIMYNIRF 646
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 307 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 486
GLPV KN + N Q + LVG +GSGK+T I F + G + G+ R
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGI---DVR 615
Query: 487 RVAAMSVAQR--VAEEMDVALGQEVGYSIRF 573
S+ Q+ + + V + Y+IRF
Sbjct: 616 NYTMHSLRQQIGIVPQDTVLFNDTIMYNIRF 646
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 358 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVA 495
++ +++VGETG GKTT + V G GK + + C + A
Sbjct: 1013 NEAVLMVGETGGGKTT--------LSEVVGRGKLRSINCHERTETA 1050
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 349 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 489
+N Q + +VG G+GK++ + E +SG G C P++
Sbjct: 685 VNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQ 731
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 349 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 489
+N Q + +VG G+GK++ + E +SG G C P++
Sbjct: 685 VNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQ 731
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 340 MRLLNTHQCIVLVGETGSGKT 402
MR + T Q I++ GE+G+GKT
Sbjct: 145 MRRIKTSQSIIVSGESGAGKT 165
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 361 QCIVLVGETGSGKTTQI 411
+CI LVG +GSGK+T I
Sbjct: 434 ECIALVGASGSGKSTVI 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,469,297
Number of Sequences: 27780
Number of extensions: 293677
Number of successful extensions: 888
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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