Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c10f
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   6.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.6  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 527 HCTQPPLATLEATEET 574
           +C  PPL +L   EET
Sbjct: 89  YCLLPPLESLATVEET 104


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 112 DNLQYQFFPVSSGSVQFKVRAAND 183
           DNLQY F    SG++ + +    D
Sbjct: 201 DNLQYSFDNQCSGTIDWALPKQED 224


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 338 SPPLRIPGLSISTLSGLVLFFLMTLLAFPQPP 243
           SPP+ I   +++ +SG++   L   L  P+ P
Sbjct: 118 SPPMPITTDNVAAISGVLRSLLDRPLPAPERP 149


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 426 SRTFPSLLRRSLHRLGCHRLLENRSA 503
           +RT PS LR  + R      L +RSA
Sbjct: 23  TRTIPSFLRDDVERYPSGPELSDRSA 48


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 412 ISWSDPEPFPVYYV 453
           + WS P+  P YY+
Sbjct: 292 LMWSKPDLIPNYYI 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,115
Number of Sequences: 336
Number of extensions: 3094
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)