Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c09f
         (341 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0C718 Cluster: Chromosome undetermined scaffold_154, w...    32   2.2  
UniRef50_Q5MGF7 Cluster: Putative secreted peptide 30; n=1; Lono...    32   2.9  
UniRef50_A7RXE4 Cluster: Predicted protein; n=1; Nematostella ve...    32   2.9  
UniRef50_A1I8L6 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_Q4N8J3 Cluster: FHA domain protein, putative; n=2; Thei...    31   5.0  
UniRef50_A6RLE6 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_A5UAF4 Cluster: Histidine Kinase; n=2; Haemophilus infl...    31   6.7  
UniRef50_A5P2S8 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_A7TJL5 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_A7EB46 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  

>UniRef50_A0C718 Cluster: Chromosome undetermined scaffold_154,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_154,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 358

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +3

Query: 105 FNGLQGCYIREFDGVLPFDSVTYSKEAECTRY--FCAHDAV-IHQSCKDEL 248
           +N  + CYI   D V     + +  + ECTRY  F  H  +   + CKD L
Sbjct: 261 YNNCKDCYIFSLDNVYRIPPMKFYPKEECTRYSLFLNHSKIGFGKDCKDLL 311


>UniRef50_Q5MGF7 Cluster: Putative secreted peptide 30; n=1; Lonomia
           obliqua|Rep: Putative secreted peptide 30 - Lonomia
           obliqua (Moth)
          Length = 62

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 15  MSLKTLVFCVCVTLASAAIQRSALEPIPDKFNGLQGCYIREFDGVLPF 158
           M  K  +  + + +A+AA     L   P +    +GCY+ E + V+PF
Sbjct: 1   MVSKIFIISLVICMANAATWMGMLPKKPKQLAHKEGCYVEEINDVVPF 48


>UniRef50_A7RXE4 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 445

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 18  SLKTLVFCVCVTLASAAIQRSALEPIPDKFNGLQGCYIREFDGVLPFDSVTYSKEAECT 194
           S+ T+  C+   L+   +  ++L P P  +N L G  I     V+    +TY+K   CT
Sbjct: 342 SIVTIFACIYNILSGYLLLLASLSPTPPLYNTLMGSIIMVTVSVVSGSLITYTKLTICT 400


>UniRef50_A1I8L6 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
           uncharacterized protein - Candidatus Desulfococcus
           oleovorans Hxd3
          Length = 306

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 42  VCVTLASAAIQRSALEPIPDKFNGLQGCYIREFDGVL 152
           V +T+A  A  +++L+P+P   N + G Y  +FD +L
Sbjct: 160 VKITIAGTAADKASLKPLPPNVNFVTGAYGDDFDRLL 196


>UniRef50_Q4N8J3 Cluster: FHA domain protein, putative; n=2;
           Theileria|Rep: FHA domain protein, putative - Theileria
           parva
          Length = 790

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +3

Query: 129 IREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTP 263
           ++ FDG++P  ++T+ ++       C  +  +H    D   + TP
Sbjct: 167 VKLFDGIIPDKTITFEEQCNIQCRICLSEGYLHYPSSDNTPNTTP 211


>UniRef50_A6RLE6 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 2363

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 162  SVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTF 275
            +++  ++ E +R   AH++ +H S  D L  D P+ TF
Sbjct: 1111 AISTDQQPEISRMISAHESHVHSSHDDHLPEDVPMPTF 1148


>UniRef50_A5UAF4 Cluster: Histidine Kinase; n=2; Haemophilus
           influenzae|Rep: Histidine Kinase - Haemophilus
           influenzae (strain PittEE)
          Length = 761

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +3

Query: 69  IQRSALEPIPDKFNGLQGCYIREFDGVLPFDSVTYSKEAECTRYF 203
           I+ +  + +P +   L+   I EF GVL F+ VTYSK  +  RYF
Sbjct: 288 IETNFAQMLPKRGEQLKNT-IGEFSGVLYFEKVTYSK-TDAERYF 330


>UniRef50_A5P2S8 Cluster: Putative uncharacterized protein; n=1;
           Methylobacterium sp. 4-46|Rep: Putative uncharacterized
           protein - Methylobacterium sp. 4-46
          Length = 227

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 332 SRRLYLKNADYVSIFFWLCKGTHRGVAA 249
           SR    +NA++V+++F +C GT  G AA
Sbjct: 165 SRETVRRNANFVALYFSICHGTEAGKAA 192


>UniRef50_A7TJL5 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 560

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 183 AECTRYFCAHDAVIHQSCKDELSSDTPVCTFTKPE 287
           A CTR  C     IH+ C+  +    P C F  PE
Sbjct: 454 AACTRMDCFFGHPIHEDCRFGVDCKNPHCLFRHPE 488


>UniRef50_A7EB46 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 2434

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 162  SVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTF 275
            +++  ++ E +R   AH++ +H S  D L  D P+ TF
Sbjct: 1174 AISTEQKPEVSRMISAHESHVHSSHDDHLPEDVPMPTF 1211


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,780,644
Number of Sequences: 1657284
Number of extensions: 6343578
Number of successful extensions: 15103
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15103
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)