Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c09f
         (341 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   2.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   3.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   6.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   8.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   8.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +3

Query: 123 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSS 254
           CY     G     S+  S++ +C RY  A D        D L S
Sbjct: 616 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLGS 659


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +3

Query: 123 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSS 254
           CY     G     S+  S++ +C RY  A D        D L S
Sbjct: 508 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLGS 551


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 262 GVSLLSSSLHDWCMTASCAQKYRVHSASFEYV 167
           G+  LS SL    +  +   K+RV SA  EY+
Sbjct: 398 GIQQLSQSLLPAIVELAEDSKWRVRSAIIEYM 429


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 307 QIM*VFSSGFVKVHTGVSLLSSSL 236
           Q +  F +GF  V TGVS ++  L
Sbjct: 272 QALLFFFAGFETVSTGVSFMAYEL 295


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 33 VFCVCVTLASA 65
          +FCV VTLA+A
Sbjct: 6  LFCVLVTLATA 16


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 266 HRGVAAQLIFTRLVYDSIVRAEVSGAFCFLRV 171
           HR VA +LI   L  +SI     +  FC  RV
Sbjct: 87  HRKVAGKLIRIFLAAESIDDLLSNAVFCRDRV 118


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 286 SGFVKVHTGVSL 251
           S F+K HTG SL
Sbjct: 306 SNFLKRHTGFSL 317


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 2   IRDQHVVENASLLCLRHFSFGGD 70
           IR+  V ++   LC+ + S GG+
Sbjct: 294 IREAKVEDSGKYLCVVNNSVGGE 316


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 286 SGFVKVHTGVSLLSSSLH 233
           +GF  VHT + L S  LH
Sbjct: 264 NGFYGVHTLLILFSCLLH 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,753
Number of Sequences: 336
Number of extensions: 1666
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)